Corvus brachyrhynchos (American crow): 103613344
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Entry
103613344 CDS
T08418
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103613344 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbrc04040
]
103613344 (TRPV1)
Ion channels [BR:
cbrc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103613344 (TRPV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
103613344
NCBI-ProteinID:
XP_008629332
UniProt:
A0A091EJE7
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MSSILGKMKKFGSFDMEESEVTDEHTEGEDSVQEAPDNPQGPLSTKVQPPKSNIFARRGR
FVMGDSDKDMAPMDSFYQMDHLMAPSVIKFHVNMERGKFHKLLSTDSITGCSEKAFKFYD
RRRIFDAVAQGNTKDLSDLLLYLNRTFKHLTDEEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIARKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKIKGKSGFYFGELPLSLAACTNQLCIVKFLLENPYQAANITAEDSMGNMVLHTLVE
IADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEILAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYTMHIIILTAAAYYRPVQKNEKPPFTFGYSTGEY
FRVTGEILSVLGGLYFFFRGIQYFVQRRPSLKTLIVDGYSEVLFFVHSLLLLSSVVLYFC
GQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFS
TAVVTLIEDDNEGQDINISDHARCCHVKRGRTSYNSLYYTCLELFKFTIGMGDLEFTENY
RFKSVFVILLVLYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILDIENSYL
NCLRRSFRSGKQVLVGITPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGYSGDLRRNP
SFSIRPGRVSGKHWKTLVPLLKDGEKRREETQKLPEEVKLKPVLEPYFEPEGSEALKESI
PKSV
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccattcttgggaagatgaagaagtttggcagttttgacatggaggaatctgaa
gtgacagatgaacacacagaaggggaggactctgtccaggaagcccctgacaacccccag
ggcccactcagcaccaaggtgcagccacccaaaagcaacatctttgcaagacggggccgc
ttcgtgatgggagacagtgacaaggacatggctcccatggactccttctaccagatggat
cacctgatggcaccttctgtcatcaaattccatgtgaatatggagaggggcaaatttcac
aagctcctatctacagattccatcacaggctgctcagaaaaagctttcaaattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaaaggacctcagtgacctgcta
ctctaccttaatagaaccttcaagcatctcacagatgaggagttcaaagagcctgaaact
gggaaaacctgtttgctgaaagccatgctgaatctacacgatgggaaaaatgataccatt
cccttgctgctggatattgcaaggaaaactggaactctgaaagagtttgttaatgcagaa
tatactgacaactactacaagggccagactgctcttcacatcgccattgagaggaggaac
atgtacctggtgaagctcctggtccagaatggagcagatgttcatgccagagcctgtggg
gagttcttcaggaaaatcaaagggaaatctggcttttattttggggagctgcctttgtcc
ctggctgcctgcaccaaccagctctgcattgtgaaattcctcctggagaatccctaccag
gcagccaacatcactgctgaggactccatgggcaacatggtcctgcacacactggtggag
attgcagataacaccaaggataacaccaagtttgtaaccaagatgtataataacatattg
atccttggtgccaagatcaatcccatcctcaagctggaagaactcaccaacaagaaaggg
ctgactcctttaactctggcagccaaaacagggaagatagggattttcgcttacatcctc
agacgagagatcaaagaccccgagtgcagacacttgtccaggaagttcactgaatgggcc
tatggacctgtccactcctctctttatgacttgtcctgtatagacacctgtgagaaaaat
tcagtgcttgagattcttgcctacagcagtgagacaccaaaccgtcacgagatgctgctg
gtggagcctcttaacaggctgctgcaagacaagtgggaccggtttgtcaagcacttattt
tacttcaacttctttgtctacaccatgcacatcatcatcctcactgcagctgcttactac
agacctgtacagaagaatgaaaagcctcccttcacctttggttacagcactggggaatat
tttcgagtaactggagagatcctgagtgtactgggaggcctctacttttttttcagaggg
atccagtatttcgtgcagaggcgcccatccctcaagacactgatagttgatggctacagt
gaggttcttttctttgtccactccctgctcctcctgagctctgtggtgctgtacttctgt
ggccaggagctgtatgtggcttccatggtgttctccttggccctgggctgggccaacatg
ctctactacacccgtggcttccagcagatgggaatttactccgtcatgattgccaagatg
atccttagagatttatgtcgcttcatgtttgtctatcttgtattcctcttgggattttct
acagctgtggtgactttaattgaagatgacaatgaggggcaggacataaatatctctgac
catgcccggtgctgccacgtgaaacgaggccgcacctcctacaacagcctctactacacc
tgcctggagctcttcaagttcaccattggcatgggggacctggagttcacagagaactac
aggttcaagtctgtgtttgtcatccttctggttctctatgtcatcctcacctatatcctc
ctgctcaacatgctcattgcactgatgggggagactgtcaacaaaattgcacaggagagc
aagagcatctggaaactccagagagccatcacaatcctggacattgagaacagctacttg
aactgtctgaggcgctcgttccggtctgggaagcaagtcctggtggggatcacacctgat
ggccaagatgattacagatggtgcttcagggttgatgaagtgaactggtccacgtggaac
actaacctgggcataatcaatgaagaccctgggtactctggggacctcagacgaaatccc
agtttctctattaggcctggcagagtttcagggaagcactggaaaacattggttccactt
ttaaaagatggagagaagaggagagaagagactcagaagctgccagaagaagtcaaatta
aaacctgttttggaaccttattttgagccagaaggttctgaggcgttgaaagagtcaatt
ccgaagtcagtctaa
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