KEGG   Corvus brachyrhynchos (American crow): 103613405
Entry
103613405         CDS       T08418                                 
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
  KO
K20299  vacuolar protein sorting-associated protein 53
Organism
cbrc  Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cbrc04131]
    103613405 (VPS53)
Membrane trafficking [BR:cbrc04131]
 Protein recycling
  Others
   EARP complex
    103613405 (VPS53)
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    103613405 (VPS53)
SSDB
Motif
Pfam: Vps53_N VPS53_C Vps54_N COG4_N FBF1 Sec8_N GrpE O_Spanin_T7 Laminin_II Syndetin_C COG3_N hAT-like_RNase-H NBD94 COG5_N FUSC MCPsignal Snf7
Other DBs
NCBI-GeneID: 103613405
NCBI-ProteinID: XP_017586475
LinkDB
Position
Unknown
AA seq 858 aa
MWLFYSWAETGHLLEKCCETQLEAGVEGIKSSRNCVKLQKLLEIVDSVCFPPSLQVFPSQ
DPLDRADFNAVEYINALFPTEQSLANIDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGR
QALEEAQKAIQQLFGKIKDIKDKAEKSEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHM
LAGGVDSLEAMTRRRQYGEVANLLQGVVNVLEHFNKYMGIPQIRQLSERVKAAQSELGQQ
ILADFEEAFPSQGTKRTGGPSNVLRDACLVANVLDPRIKQEIIKKFIKQHLSEYLVLFQE
NQDVAWLDKIDRRYAWIKRQLVDYEEKYGRMFPAEWCMTERIAVEFCHVTRAELSKIMRT
RAKEIEVKLLLFAIQRTTNFEGLLAKRFSGCTLADGTVKKPEVPPPSTNPFLEDETGAET
DEIVIEKSDTDKPKKPKVPDNPFHGIVSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQ
GPPKPNVDEGGAVLPSCADLFVYYKKCMVQCSQLSTGEPMIALTTIFQKYLREYAWKILS
GNLPKTTSSSGGLTITSLLKEKEGSEVAKFTLEELCLICSILSTAEYCLATTQQLEEKLK
EKVDASLMERINLTGEMDTFSIVISNSIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQ
SPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKFANSFIPKFINHLFKCKPISMVGAE
QLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTKIVVKGMTRAEMILKVVMAPHEPPVVFV
DNYIKLLADCSTDTFQKILDMKGLKRSEQSSMLDLFRLRLPAPPPGGDSTSSLSLSAPTP
EQESSRIRKLEKLIKKRL
NT seq 2577 nt   +upstreamnt  +downstreamnt
atgtggctgttctactcctgggcggagactggccacttgttagagaaatgctgtgaaaca
caactggaggcaggtgttgaaggaattaaaagtagtagaaactgtgtaaagttacagaaa
ttactggagattgttgacagtgtttgttttcctccctctctccaggtatttcccagccaa
gatccactggacagagcagatttcaatgctgtggagtatattaatgctctctttcccact
gagcaatctttggcaaacattgatgaggtcgtgaacaaaatcagattgaaaataaggagg
ttggatgacaacattcgaactgtggtgaggggacagaccaacgtgggacaggatggcagg
caggccctggaagaagcccagaaagccattcaacagctcttcggtaaaattaaggatatt
aaagacaaggctgaaaaatctgaacaaatggtgaaggaaatcacccgggatatcaagcag
ctggatcatgccaagcgtcacctgaccacctccatcaccaccctcaaccacctccacatg
ctggcagggggggtggattctctggaggctatgaccaggaggagacagtatggggaagtt
gccaaccttctccaaggtgtcgtgaatgtgttggagcacttcaacaaatacatggggatc
cctcagattcgacagctctctgagagggtgaaggcagcacagagcgagttggggcagcag
atcctggctgattttgaggaagcctttccttctcaaggtacaaagaggactggtgggccc
agcaatgtcctacgtgatgcctgcctggtagccaacgtcctggatcccaggatcaaacag
gaaatcatcaagaaatttattaaacaacatctctcggagtatctggtccttttccaggaa
aatcaagatgtggcctggctggataagatcgaccggcgctacgcctggatcaagaggcag
ctggtggattacgaggagaagtacgggcgcatgttcccggcggagtggtgcatgacggag
cgcatcgccgtggagttctgccacgtcaccagggcagagctctctaagatcatgcgcacg
agggcgaaggagattgaggtgaaattgcttttgtttgcaattcagagaacaaccaacttc
gaagggctcctggccaagcgcttctcaggctgcactcttgctgatggcacagtgaagaag
ccagaagtgccacctccctccaccaacccctttctggaggatgaaactggggcagagaca
gatgagattgtgatcgagaaaagtgatacggacaaaccaaagaagccaaaggtccctgac
aatcctttccatggcattgtttccaagtgctttgagcctcacctttatgtgtatattgag
tcccaggacaaaaacctgggcgagctgattgacaggtttgtggctgacttcaaggctcag
ggaccccccaagcccaacgtggatgaaggaggagccgtcctgcccagctgtgctgacctc
tttgtgtactacaagaagtgcatggtgcagtgctcccagctcagcactggtgagcccatg
atagcgctgaccaccatcttccagaagtacctgcgggaatatgcctggaaaattctctct
ggaaacctgcccaagacaaccagcagcagtggtgggctcaccatcacaagtttgctgaaa
gaaaaggaaggctctgaagtggcaaagtttactttagaagagctctgcctcatttgcagc
atcctaagtactgcagagtactgcctggccaccacccagcagttggaagagaaactcaaa
gaaaaagtggatgcgagcctaatggagagaatcaacctgacaggagagatggacactttc
agcattgtgatctccaacagcatccagctgttagtgcaggacctggatgcagcctgtgac
cctgccctgactgctatgagcaagatgcagtggcagaacgtggaacacgtcggtgaccag
agtccttatgtcacctcagtgatcctccacattaaacagaatgtgcccatcatccgtgac
aacctggcctccacgaggaagtatttcactcagttctgcataaaatttgcaaactccttc
attcccaagttcattaaccatctcttcaagtgcaaacctatcagcatggtgggtgctgag
cagctgctgctggacactcattctctgaagatggttctcctggatctgccctccattggg
tcccaagtggtgaggaaggctcctgccagctacacaaagatagtggtgaaaggcatgact
cgggctgaaatgatcctgaaggtggtgatggctccacatgagcccccagttgtgtttgtg
gacaattacatcaagctcctcgctgactgcagcactgacacgttccagaagatcctcgac
atgaagggcctgaagaggagtgagcagagcagcatgttggatctcttccgcctgcgcctc
cccgctcctccccccggcggggacagcaccagctccctctcactgagcgctcccacgccc
gagcaggaatcctctcggatacggaaactggagaaactcatcaaaaagagactctga

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