Corvus brachyrhynchos (American crow): 103613429
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Entry
103613429 CDS
T08418
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
103613429 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbrc02000
]
103613429 (SLC6A4)
Transporters [BR:
cbrc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
103613429 (SLC6A4)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
103613429
NCBI-ProteinID:
XP_017586525
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All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MEKKATRNETEPLTSKKDFSDCSKGDDCKENGLVVRNPKSALRLVEDGNKVHSSQGDKGE
AAQISNGYSGVQSSVPCNGEMEDAQGTAPAATTTTTTTTSTTCGAEAQQQLMELEDRETW
SKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALGQY
HRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLISSFTAELPWTSCTN
PWNTGNCTNYFSKDNVSWSLHSISPAEEFYTRQVLQVHRSDGLDDLGGISWQLTLCLLLI
FTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWQKLLA
TEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCLTSFVSGFVIFTV
LGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTFAG
LEGVITGVLDEFPHVWGKRRELFVLGLTIVCFLGSLATLTFVSISPTLSPPHWQFPANDT
LEGRNF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaggccacaaggaatgagacagagcccctgacttccaagaaagatttctca
gactgtagcaaaggagatgattgtaaagagaacggacttgtggtcaggaaccctaaatct
gccctacggctggtggaggatggcaacaaagtccactccagccagggggataagggggag
gcagctcagatctcaaatggttattcaggggttcagagctccgttccctgcaatggagag
atggaggatgcccagggcacggccccagcagccaccaccaccaccacaaccaccacatcc
accacctgcggggccgaagctcagcagcagctgatggagctggaggacagagagacctgg
agtaaaaaaattgactttcttctctctgtcattggatatgcagtggatctgggaaatgtg
tggagatttccttatatctgttatcaaaatggaggaggagcattcctcattccttacaca
atcatggccatctttggagggattcctctcttctatatggaattagcactaggacagtac
cacaggaatgggtgtatttccatttggagaaaaatatgtcctatattcaaaggaattggc
tttgccatctgtatcatagatctttacgtagcctcctactacaacaccatcatggcttgg
gctttttactacctcatctcctccttcacggcggagctgccctggaccagctgcacaaat
ccctggaacacaggaaactgcaccaactacttcagcaaggacaacgtcagctggtccctg
cactccatctctcctgcagaagaattttatacccgccaggttctgcaggtgcacaggtct
gatggactggatgacctggggggcattagctggcaactgaccctctgcttgctgttaatc
ttcaccattgtgtacttcagcatctggaaaggggtcaaaacatcaggcaaggtggtttgg
gtgactgccacgttcccttacatcatcctcttcatcctgctagtgagaggtgcaactttg
cctggggcttggagaggtgtcctctactacttgaaacctgactggcagaaactcctggcc
actgaggtttgggtggatgcagcagctcagatttttttctccctgggaccaggttttggg
gtcctgttggcttatgccagctacaacaaattccacaacaactgctaccaagatgctttg
gtcaccagcactgtgaactgcttgaccagctttgtgtctggatttgtgatcttcaccgtg
ctgggatacatggctgagatgaggaacgaggatgtgtcagaggttgccaaagacactgga
cccagcctgctcttcatcacgtatgcagaggccattgcaaacatgcctgcttccaccttc
tttgccatcatcttcttcctgatgctgctcacactggggttagacagcacgtttgcagga
ctagagggagtgattactggagtcctggatgaattcccgcatgtctggggcaaacgcagg
gaattgtttgtccttggtctgaccatcgtttgctttttggggtcactggcaaccctgaca
tttgtgagtatttcacccaccctcagcccccctcactggcagtttcctgccaacgacacc
ttggagggcagaaatttttga
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