Corvus brachyrhynchos (American crow): 103613811
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Entry
103613811 CDS
T08418
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103613811 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrc03019
]
103613811 (DIS3)
Messenger RNA biogenesis [BR:
cbrc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
103613811 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Toxin_R_bind_C
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
103613811
NCBI-ProteinID:
XP_008629866
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
LIHIHFVPQIDILEDPVIKNVIVLQTVLQEVRNRSAPVYKRIRDLIQNPEKHFYSFTNEH
HRETYIEQKRGETSNDRNDRAIRVAVKWYNEHLKRIEDEEKIQVVFLTNDRTNKEKALEE
GITAYTCEEYIKSLTANPELVDRLACVSDEGKEIEGGKIIFPEHIPLSKLQQGIKSGIYL
QGTYRASRENYLEATVWVHGDAEENKEIIVQGLKHLNRAIHEDVVAVELLAKDEWVAPSS
VVLQDDGQNEEGIESEEEKENILKTSVNKDMLRPTGRVVGIIKRNWRPYCGMLSKSQIKE
ARRHLFTPADRRIPRIRIETRQADTLEGQRIIVAIDGWPRNSRYPNGHFVKNLGSAGDKE
TETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEEDMKHREDLRHLNVCSVDPPGCTDID
DALHCREMENGNLEVGVHIADVSHFIRPGNALDEESVKRGTTVYLCEKRIDMVPELLSSN
LCSLRSNVDRLAFSCIWEMNHKAEILKTRFTKSIINSKASLTYAEAQMRIDSATMNDAIT
TSLRGLNKLAKVLKKKRIDNGALTLASPEVRFHMDSETHDPIDLQTKELKETNSMVEEFM
LLANISVAQKIYDEFPEFALLRKHPAPPPSNYDILVKSAKSKNLEIKTDSAKALAESLDK
AESPTFPYLNTLLRILATRCMMQAVYFCSGMDNDFHHYGLASPIYTHFTSPIRRYADIIV
HRLLAVAIGADSTYPELTDKHKLAEMCKNLNYRHKMAQYAQRASVAFHTQLFFKTKGVVN
EDAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPTPKLEYNSEVPSLTVEDTTLRVFDKV
KVNIMLDDSNIQHQKMRMVLVEPKILGNDMPASLSAEASSKDEPEKKKKKLQK
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
ttgattcatattcattttgttcctcagattgatatccttgaagatcctgttattaagaat
gtcattgtgctgcagacagtcctacaagaagtcaggaatcggagtgcgccagtgtacaag
cgaattagggacctgattcaaaacccagaaaaacatttctattctttcaccaatgagcat
cacagagaaacgtacatagagcaaaagcggggagaaacttctaacgaccgcaatgacaga
gccattcgggtagcagtgaaatggtacaatgaacacttgaagagaatagaggatgaggag
aagattcaagttgtctttttaacgaatgacagaactaataaagagaaagctctggaggaa
gggataactgcttatacatgtgaggaatatataaaaagcttgacagctaatcctgagctt
gtagatcgtcttgcttgtgtatctgatgaagggaaagaaatagaaggtggaaaaataata
ttcccagaacatattcctcttagcaaattgcagcaaggaataaaatctggtatttacctc
caaggaacttacagggcaagcagagagaattatcttgaagctactgtttgggttcatgga
gatgctgaagaaaataaagagataattgtacagggactgaaacatttaaaccgagcgatt
catgaagatgttgtagccgtggagctgttggcaaaagatgaatgggtggcaccgtcctcc
gtggttttgcaagatgatggccagaatgaagagggcattgaaagtgaagaggagaaagaa
aacattctgaagacttctgttaacaaggacatgctgaggcctacgggaagagtagtgggc
attataaaacgaaactggcggccgtattgtgggatgctttccaagtcacagatcaaagag
gcaaggcgccatttgtttacaccagctgatcgcagaattcctcgcattcgaatagaaacc
agacaagcagatacattggaagggcaaagaataattgttgctattgatggttggcccagg
aattccaggtatccgaatggtcattttgtaaagaatttgggaagcgctggagataaagag
acagagacagaagttctcctgcttgaacatgatgtccctcaccaggctttttcccaggct
gtccttagtttcctaccaaaaatgccatggagcattaccgaagaggatatgaaacacagg
gaggacttaaggcatctgaatgtttgtagtgttgatcctcctggttgtacagatattgat
gatgcattacattgtagagaaatggagaatggaaatctagaggttggtgtacatattgca
gatgtcagtcattttattcgcccaggaaatgctttggatgaggagtcagtaaaaagagga
acaacagtgtatctgtgtgaaaaaaggattgatatggttccagagctacttagttccaac
ttatgctccctgagatctaatgtggacaggcttgcattttcatgcatatgggagatgaac
cataaggctgagattctaaaaactagatttacaaagagtattattaattccaaggcttct
cttacatatgctgaagcacagatgagaattgattcagcaactatgaatgatgccattact
accagcctacgtggactaaacaaattagcaaaagttctgaagaagaaaagaattgataat
ggagccttgacacttgcatcaccagaagttcgtttccacatggacagtgaaactcatgat
cctattgatctgcagactaaggagctcaaagagacaaattccatggttgaagagttcatg
ttgcttgccaacatttctgttgcacaaaaaatttatgatgagttcccagagtttgccttg
ctccggaaacatcctgctcctcccccatcaaattatgacatccttgtgaagtctgcaaag
tccaagaatttggaaattaagacagattcagcaaaggctttagctgaatcattagacaaa
gctgaatctcctacattcccctacctaaatacactgctgcgaattttggccactcgctgc
atgatgcaagctgtttatttctgctcaggaatggataatgattttcatcactatggttta
gcctcacctatttatacccactttacctcgcctattcgaaggtatgctgatatcatagtc
catcggcttttggcagtggccataggagcagacagtacttatccagaacttacagacaaa
cacaaactggcagagatgtgtaaaaatctcaattaccgacataaaatggcccaatatgca
caaagggcctctgttgcattccatacacagctgttcttcaaaaccaagggagtagtaaat
gaagatgcatatatcttatttgtaagaaaaaatgcaattgtggttctgattcccaagtat
gggttagaaggaacagtcttctttgaagaaaaagacaaaccaacaccaaaactggagtac
aacagtgaggtgccatcacttactgtggaagacacaacattacgtgtatttgataaagtg
aaagtgaacattatgttagatgattccaacatccagcatcagaaaatgcggatggtcttg
gtagaacccaagatattaggaaatgatatgcctgcaagtctgtctgcagaggcaagcagc
aaggatgaaccagagaaaaagaaaaagaagctacaaaaatag
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