Corvus brachyrhynchos (American crow): 103613921
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Entry
103613921 CDS
T08418
Symbol
COL8A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
cbrc
Corvus brachyrhynchos (American crow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
103613921
NCBI-ProteinID:
XP_008630007
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MATLLFPLQLLAVAVTVYLELVRSAQGGAYYGIKQLPPQVPQYQPLGQQVPHIPLGKEGI
PMQHLGKEIPHMQYGKEYPHLPQYRKEVPQMPMLGKDMAPKKEKEIPMRSLRGEQGPPGE
PGPRGPPGPPGLPGHGVPGAKGKPGPQGYPGIGKPGLPGMPGKPGVMGPPGPRGEMGPKG
EIGPMGIPGPQGPPGPHGLPGIGKAGPPGLQGQPGPKGEPGMKGPPGIPGIPGPKGEKGV
GIPGLPGLKGPPGLPGPPGPVGLPGVGKPGMVGFPGPQGPLGKPGPPGELGLQGPPGAPG
IQGPPGPPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGVGKPGFPGPKGERGVG
GLPGPLGPKGEKGHAGPPGMGGPPGEPGQPGLPGIMGPPGAAGFPGPKGEGGAVGPPGPV
GPKGEPGLQGFPGKPGFPGEVGGPGLRGLPGPTGPKGEAGHKGLPGLPGVPGLVGPKGEP
GLPGAQGLQGPSGIPGIAGPSGPIGPPGLPGAKGEPGMPGPPGFPGVGKPGAAGLQGPPG
KPGALGPPGQPGLQGPPGPPGPPGPPVVIPPTPPAVGQXXXXXXXHXVYEMPAFTAELLT
PFPRVGVPVKFDKLLYNGRQNYNPQTGIFTCEIPGVYYFAYHVHCKGANVWVALYKNNEP
LMYTYDEYKKGFLDQASGSAVVQLMHGDKVYVQMPSEQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggccacgctgctcttccctctgcagctgctggcagtggctgtcactgtttacctagag
ctggtgaggtctgctcaaggtggtgcctactatggaatcaagcagctgccacctcaggtg
ccccagtaccaacccctcggacaacaagtacctcacattccgctgggcaaagaaggcatc
ccgatgcagcatctgggcaaggagataccccacatgcagtatgggaaggagtacccccat
ctgcctcagtacaggaaggaggtcccacagatgcccatgcttggcaaggatatggctccc
aagaaagagaaagaaattcccatgcgcagtctgaggggtgagcaaggcccccctggtgag
cctggaccaagagggccaccagggccaccaggattaccaggtcatggtgtgccaggagcc
aaaggaaaaccaggcccacaaggatacccaggaattggaaagccgggtttgccagggatg
ccaggaaaaccaggggtcatggggcccccagggccaagaggggagatggggcccaagggg
gagattgggcccatggggatacccggaccgcaaggaccaccagggcctcatgggcttcct
ggcatagggaaggcgggtcctccagggctgcagggacagccagggccaaagggtgagcct
gggatgaaggggccaccaggaatccctggaatcccagggccaaaaggggagaagggggtt
gggatcccgggtttgccaggtctgaagggtccacctgggctgcctggtccccctggtccc
gtggggctgccgggggtcggcaaaccaggcatggttggcttccctggcccacagggaccc
ctgggcaaacctggacccccaggagagttagggctccaggggcctccaggggcccccggg
atccaaggccctcccggcccacctggcattggcaaaccaggccaggatggcatacctggc
cagccgggcttcccgggtggcaaaggggagcagggattgccaggcctgcccgggccccct
ggtctccctggagtcgggaagccaggcttccctgggcccaaaggggagcgaggtgtgggt
ggtctgcctggccccctggggccaaagggggagaaggggcatgcggggccacctggcatg
ggagggccaccaggggagccaggccagccaggactgccaggcatcatgggccctccaggg
gctgctggtttcccaggacctaaaggagaggggggtgctgtagggccaccaggaccagtc
ggccccaagggagaacctggcctgcagggttttccaggaaagccaggctttcccggggaa
gtgggtggccctgggctgcgggggctgccaggccccacaggacccaaaggagaagccgga
cacaaaggcttgccggggctgccgggtgtcccagggcttgtggggccaaagggtgagccc
gggctccccggtgctcaggggcttcagggcccctcgggcatcccaggcatcgcgggaccc
agtggtcccatcggcccccccgggctgccaggggcgaagggcgagccaggcatgcccggg
ccccctggcttccctggggtaggcaaacctggtgctgcagggctgcagggacccccggga
aaacctggggcgctcggtccgccgggtcagccagggctccaggggccaccgggccccccc
gggcccccaggtccaccagtcgtcatcccacccactccacccgccgtgggacagtnnnnn
nnnnnnnnnnnnnnncatnntgtctacgagatgcccgcattcacagcagagctcctcacc
cccttcccccgcgtcggggtgcccgtgaagttcgacaagctcctgtacaacggccggcag
aactacaacccccagacggggatcttcacctgcgagatccccggcgtctactacttcgcc
taccacgtccactgtaaaggcgccaacgtgtgggtggccctgtacaagaacaacgagccg
ctcatgtacacctacgacgagtacaagaagggcttcctggaccaggcttcaggcagtgct
gtggtgcagctgatgcatggagacaaggtttacgttcagatgccatccgagcaggcagca
ggactctatgccgggcagtacgttcattcgtctttttcaggatatttattgtatcccatg
taa
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