Corvus brachyrhynchos (American crow): 103613937
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Entry
103613937 CDS
T08418
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04137
Mitophagy - animal
cbrc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103613937
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
103613937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrc03019
]
103613937
03009 Ribosome biogenesis [BR:
cbrc03009
]
103613937
04131 Membrane trafficking [BR:
cbrc04131
]
103613937
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbrc04147
]
103613937
Messenger RNA biogenesis [BR:
cbrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103613937
Ribosome biogenesis [BR:
cbrc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
103613937
Membrane trafficking [BR:
cbrc04131
]
SNARE
SNARE associated proteins
Others
103613937
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103613937
Exosome [BR:
cbrc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103613937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
ResIII
TsaE
NB-ARC
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
103613937
NCBI-ProteinID:
XP_008630025
UniProt:
A0A091E902
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
SKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLKGKKRRE
AVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGI
TGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEG
EPIKREDEEESLNEVGYDDIGVCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP
PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL
DAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE
VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK
MDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVK
RELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE
LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILT
EMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPV
AKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDD
PVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPSQG
TGGGSGGNVYSEDNDDDLYG
NT seq
2404 nt
NT seq
+upstream
nt +downstream
nt
ctctaaagccgatgacttatcaactgctattctgaagcagaagaacaggcctaatcggtt
aattgttgatgaagccatcaatgaagacaacagtgttgtgtcactgtcccaggcaaaaat
ggatgaactgcagctgttcagaggagacactgtcctgctaaaaggaaagaagagaagaga
agcagtctgcattgttctgtcagatgatacctgctcagatgagaagattcgcatgaatag
ggttgttcgaaacaacttgagagtgcgcttgggtgatgtcatcagcatccagccttgccc
agatgtgaaatatggcaaacgtatccacgtgttaccaattgatgacacagtagaagggat
cacagggaatctgtttgaggtctatctcaagccatatttcctggaagcttacagacccat
caggaaaggtgacatcttcttggtgcgtggagggatgcgtgcagtggagttcaaagtggt
ggagacagatccaagcccgtactgcatagtggctccggacacagtgatccattgtgaggg
agagcccatcaaacgagaggatgaagaggagtcactgaatgaagtgggctatgatgacat
tggtgtctgccggaagcagctggctcaaatcaaagagatggtggaacttcccctccgaca
ccctgctctcttcaaggccataggggtgaagcctccccgtgggatcctgctgtatggtcc
tcctggcactggtaaaacactgattgcccgagcggtggccaatgaaacaggggctttctt
cttcctgatcaatggtcccgagatcatgagcaagctggctggtgagtctgagagcaacct
gaggaaagcctttgaagaagcagagaagaatgctcctgctatcatcttcattgatgaact
ggatgccattgctcctaaaagagagaagacacacggagaggtggaacgtcgcattgtgtc
tcagctgctgactcttatggatggactgaaacagagagcacatgtgattgttatggcagc
caccaacagacctaacagcattgacccagctctcaggcgatttggtcgttttgacagaga
ggtagatattggtatcccagatgccaccgggcgcctggaaatcctgcagatccacacaaa
aaatatgaaactggctgatgatgtggatctggaacaggtggcaaacgagacccatggcca
tgttggtgctgacttggctgctctttgctcagaagctgctcttcaggctatcagaaagaa
gatggatctcatagacctggaagatgaaaccatcgatgctgaagtgatgaactctctggc
tgtgaccatggatgacttcaggtgggctctgagccagagcaacccatccgctcttcggga
gactgtggtggaggtgccacaagttacctgggaagatattggtggtctagaagatgtaaa
aagagaactccaggaacttgtacagtatcctgtggaacacccagacaaattcctcaaatt
tggcatgaccccatcaaaaggggttctgttctatgggccacctggttgtggtaagacact
cctggccaaagccattgctaatgaatgccaggcaaacttcatttccattaaggggccgga
attgctcaccatgtggtttggtgagtctgaagccaacgtgcgcgagatctttgacaaagc
tcgccaagcagccccgtgtgtgctcttctttgatgagctggactccattgccaaggcccg
aggtgggaatatcggcgacggtggcggtgctgcagatcgtgtcatcaaccagatcctaac
tgagatggatggaatgtccaccaagaaaaacgtcttcatcatcggtgccaccaacaggcc
agacatcattgacccagccatcctgcgccccggccgcctggatcagctcatctacatccc
cctgcctgatgaaaagtcccgggttgcaattcttaaggccaatctgaggaaatcaccagt
tgccaaggatgttgacctggatttcctagctaagatgaccaatggcttttcgggggctga
cctgacagaaatttgccagcgtgcctgcaaactggccatccgcgaatccatcgagagtga
gatcaggcgagagcgtgagaggcagaccaacccttctgccatggaagtggaggaggatga
cccagttcccgagatccgcagggatcactttgaggaggccatgcgctttgctcgccgctc
tgtcagtgacaacgacatcaggaaatatgagatgtttgcgcagaccctacagcagagccg
tggctttggcagcttcaggttcccgtcaggcaaccagggcggtgccggtccgagccaagg
cacaggaggtggcagcgggggcaatgtgtacagcgaagacaatgatgatgatctctacgg
ttaa
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