Corvus brachyrhynchos (American crow): 103614584 Help Entry 103614584         CDS       T08418                                  Symbol IGHMBP2 Name (RefSeq) DNA-binding protein SMUBP-2   KO K19036   ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] Organism cbrc  Corvus brachyrhynchos (American crow) Brite KEGG Orthology (KO) [BR:cbrc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:cbrc03009]     103614584 (IGHMBP2)    03012 Translation factors [BR:cbrc03012]     103614584 (IGHMBP2) Enzymes [BR:cbrc01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      103614584 (IGHMBP2)     5.6.2.5  RNA 5'-3' helicase      103614584 (IGHMBP2) Ribosome biogenesis [BR:cbrc03009]  Eukaryotic type   Other ribosome biogenesis factors    103614584 (IGHMBP2) Translation factors [BR:cbrc03012]  Eukaryotic type   Initiation factors    Initiation associated factors     103614584 (IGHMBP2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 SMUBP-2_HCS1_1B R3H AAA_30 AAA_19 zf-AN1 Helicase_RecD ResIII Viral_helicase1 AAA_16 nSTAND3 DEAD AAA_22 UvrD-helicase AAA_25 Flavi_DEAD SLFN-g3_helicase T2SSE IstB_IS21 ABC_tran DAP3 AAA PhoH NTPase_1 Herpes_ori_bp Motif Other DBs NCBI-GeneID:  103614584 NCBI-ProteinID:  XP_017588254 LinkDB All DBs Position Unknown AA seq 901 aa AA seqDB search MARLSGHSTLSPGAVALSLTPWCSHPCLVPRAWQESVSLKELQRRGVCLLKLQVTSQRTG LYGRLLVTLQPRNRDSDTELPSNSFGPGDIVGLYESAGQGEPLCTGVVTRVTPKAVTVAL EEPRDGELAVDHEHSFRLLKLANDVTYNRLKRALTALRQYRGGPASDLIDVLFFASAPRA FPETKPLEFFNASLDESQREAVSFSLAQRELAIIHGPPGTGKTTTLVEVILQAVQQGLKV LCCAPSNVAVDNLVERLAGGRARLLRLGPPARLLQPIQQHSLDAVLARGDNAQIVADIRR DIDQAWAKTKKAQDKGERSHFLGEIKTLKKELKEREEAAMAAALSQAGIVLATNTGASSD GPLKLLPETHFDLVVIDECAQALEASCWIPLLKAPKCILAGDHKQLPPTIISHRAAAEGL SLSLMERLAGHYGERAVRMLTVQYRMHRDIMEWASSELYGGRLSAHPSVAQHLLRDLPGV SSTEETSIPLLLIDTAGCGLFELEVEDEQSKGNPGEVQLVGMHVQALVDAGVKAKDIAVV APYNLQVDMLRQHLGHSHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEERRIN VAVTRARPGSQKPGARSSPSTSGPGREGSGTKEGGDRFRAMLVAFLASSEAQLDFPASLN SHERMLVHVLAEEYGLQHLSSGEGRDRYISVRKRLPEQSPLPSEPPLPSEPLPEPQHPGG NTPDPAEPGKSSEGSGKVDLKSLHLERVQREKARREEAARKVQEPGRGSRKKDNSEAKGK PVVGSAAGEDFDALISAAIEADRTCGFPRCKASVTTLGQLCHHCQRLFCLSHHIPEAHGC GEKAKAHARQRISREGILYPGSGSKDKSLDPAKRAQLQRRLDKKLSELTSQRKGKKKDKE K NT seq 2706 nt NT seq  +upstreamnt  +downstreamnt atggcccggctttcgggccattccacactgtcccctggagctgtggccctcagccttacc ccatggtgttcccacccgtgtttggttcccagggcatggcaggagagtgtctccctgaag gaattgcagcggagaggggtctgcttgctcaagctccaggtcaccagccagagaaccggc ctctatggacgtctcctcgtgacattgcagcccaggaatcgggattcggacaccgagctg ccctccaacagctttgggcctggggacatcgtggggctgtacgagtcagccgggcagggg gagccgctgtgcacgggcgtggtgacacgtgtcacccccaaggcagtgacggtggccctg gaggagccccgggatggggagctggccgtggaccacgagcactccttccgcctgctcaag ctggccaacgatgtcacctacaacaggctcaaaagagccttgactgcactcaggcagtac cgtggtggcccagcctccgacctgattgacgtcctcttctttgcctctgctcccagggcg ttccctgaaacaaagcctctggagttcttcaatgcctccctggatgagtctcagagggaa gctgtgtccttctccctggctcagagggagctcgccatcatccacgggcctcccggcaca gggaaaaccacgacgctggtggaggtcatcctgcaggctgtgcagcagggcctgaaggtg ctgtgctgtgccccctccaacgtggccgtggataacctggtggagcggctggccggcggc agggcgcggctgctgcggctgggcccccccgcccgcctgctccagcccatccagcagcac tccctggacgccgtcctggcccgcggggacaacgcccagatcgtggccgacatcaggagg gacatcgaccaggcctgggcaaaaaccaaaaaggcccaagacaagggagagcgaagccat ttcctgggtgagattaagaccctgaagaaggagctgaaggagcgagaagaggctgccatg gctgcggccctcagccaggccggcattgtccttgccaccaacacaggtgcttcctcagac ggccccctgaagctgctgcctgaaacccactttgacctggtggtgattgatgagtgtgcc caggctctggaagccagctgctggatccctctgctgaaggctcccaagtgcatcctggct ggggatcacaagcagctgccccccaccatcatctcccacagggccgcggccgaggggctg tccctgagcctgatggagcggctggcggggcactacggggagcgggcggtgcggatgctg acggtgcagtaccgcatgcaccgggacatcatggaatgggcgtcctcggagctctacggc ggccggctcagcgcacacccctccgtggcacagcacctgctcagggacctgccgggagtg tcctccacggaagagaccagcattcccttgctgctcatcgacaccgctggctgtggcctg ttcgagctggaagtggaggatgaacagtccaagggcaatccaggggaggtccagctggtg gggatgcacgtccaggccttggtggacgctggtgtgaaggccaaggacatcgctgtggtg gctccctacaacctccaggtggacatgctccgacagcaccttggccacagccaccccgag ctagaaattaaatcagtggatggtttccagggaagggagaaggaggcagtgatcctgtcc tttgtcagatccaacaggaaaggtgaggtgggcttcctggccgaggagcggcgcatcaac gtggcggtgacgcgggcgcggccagggagccagaaaccaggagcacggagctcgccaagc acctctgggcctgggagagagggctcagggaccaaggagggtggggacaggttcagggcc atgctggtggccttcctggcgagcagcgaggcgcagctggatttcccagcgtccctgaat tcccacgagcggatgctggttcacgtgctggcggaggagtacgggctgcagcacctgagc tccggggagggccgggacaggtacatcagtgtccgcaagagactccccgagcagtccccg ctgccctccgagcccccgctgccctccgagccgcttcctgagccccagcatcccggcggg aacacccctgaccccgcggagccggggaaaagcagcgagggctcagggaaagtggacctg aaatccctgcacctggagagagtccagagggagaaagccaggcgggaggaggcggcgagg aaggtgcaggagcccggccgtggcagcaggaaaaaggacaacagtgaagccaaaggaaag ccggtggtcgggagcgcggccggggaggatttcgacgctctgatctcggctgccatcgaa gctgacaggacctgcggcttcccccgctgcaaggcttctgtcaccaccctgggccagctc tgccaccactgccagcggctcttctgcctcagccaccacatccccgaggcccacggctgt ggggagaaggccaaggcccacgcgcggcagcgcatcagccgggaagggatcctgtatccc ggcagcggctccaaggacaaatccctggatcccgccaagcgagcccagctccagcggcgc ctggacaagaagctcagcgagctgacgagccagaggaagggcaagaagaaagacaaggag aaatga

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