KEGG   Corvus brachyrhynchos (American crow): 103614781
Entry
103614781         CDS       T08418                                 
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X2
  KO
K15682  ligand of Numb protein X 3/4 [EC:2.3.2.27]
Organism
cbrc  Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cbrc04121]
    103614781 (PDZRN4)
Enzymes [BR:cbrc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103614781 (PDZRN4)
Ubiquitin system [BR:cbrc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    103614781 (PDZRN4)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 103614781
NCBI-ProteinID: XP_008630986
LinkDB
Position
Unknown
AA seq 777 aa
MGCNLCTFQKREEHYKLLYEVSQVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRRAPATK
AHSSSQDVRLMDASTQTDITFEHIMALAKLRPSTPPVPDICPFLLSDSCHSLHPVEHEFY
EGNEYLSSLPADADRAEDFEYEEVELCRIGSQEKLGLTVCYRTDDEEDTGIYVSEVDPNS
IAARDGRIRGGDRILQINGQDVQNREEAVALLSSEECKKIVLLVARPEMQLEEGWLDDER
NEFLEELNLEMLEEKHNEAMQYTANEVEQPKKHEEEDGTTDTATSSSNNHEKDSGVGPTD
ESLRNDESSEQENATEEQNSATLQSKRDLGHSQDTLGSIELQCNESFVSGEYIESDFIGN
PEEECERFRQLLELKCKIRNHGEYDLYYSSSMIECNRREQDGVEHELQLLNEELRNIELE
CQNIMQAHRLQKVRDQYGDIWALHDESFRNYNTSIDVQRGKLDDIMEHPEKSDKDSSSAY
NTAESCRSTPLTVERSPDNSLQRVISITNRKNLRSTIVANQSSSGQSNRETTSAKTKLTE
QNSAAENAGLASESSKFTDQERQGSEHIPYLSPYHSSSYRYGNIPAHAKHYQSYMQLIQQ
KSAVEYAQSQLSLVSMCKDSQKCAEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIK
EERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGS
EGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgggctgcaatctgtgcacttttcagaagagagaggagcactacaaactgctctatgaa
gtttcacaggtcaatgggaaggacctgtccaaggccactcatgaagaagcagtggaagct
ttccgcaatgccaaggagcccattgtagttcaggttttacgacgagccccagctaccaaa
gctcacagtagctctcaggatgttcggcttatggatgccagcactcagactgacatcact
tttgagcacattatggctctggccaaactaaggccttccacaccaccagttcctgatatc
tgcccttttctactttcagacagctgccattctcttcacccagtggagcatgaattttat
gaaggtaatgagtatctttccagcctgcctgctgacgcagatagagcagaggactttgag
tatgaggaggtggagctgtgccgcattggcagccaggagaagctagggctgactgtctgt
tacagaaccgatgatgaggaggacacgggaatctatgtcagtgaggttgatccaaacagc
attgctgccagagatggacggatccgtggaggagaccgcattttgcaaataaatggccag
gatgtccagaatcgggaagaggcagtggcgttgctctccagcgaagaatgcaagaaaatt
gtgttgctggtcgcaaggccagagatgcagctggaggaagggtggctggatgatgaaagg
aatgaattcttagaggagttaaacttggaaatgttggaagagaagcataatgaagcaatg
cagtacacagccaatgaggtggagcagccaaagaaacatgaagaggaagatggcactaca
gacactgcaacctcatcgtccaacaatcatgagaaggacagtggggtgggacctacagat
gaaagtctccgtaatgatgagagctcagagcaggaaaatgcaactgaggagcagaatagt
gctaccttgcagagcaaacgggatctgggccacagccaggatacattaggcagtattgag
ctccagtgcaatgaaagctttgtgtctggggaatacattgaatctgatttcataggaaat
ccagaggaggaatgtgaaaggtttcggcagctgttggaactgaagtgcaagattcgaaac
catggggagtatgatctgtattactcaagcagcatgatagagtgcaacagaagagagcaa
gacggagtcgagcatgagctgcagctactcaatgaggaactgaggaacattgaacttgaa
tgccagaatattatgcaggctcaccggctccaaaaggtgagagatcagtatggagacatt
tgggctttacatgatgaaagtttcaggaattataacaccagcatagatgtacaaagaggc
aaactggatgacatcatggagcaccctgagaagtctgacaaggacagctccagtgcctac
aacactgccgaaagctgcaggagcactccgctgactgtggagcgatcccctgataactct
ctccagagggtgatcagcataaccaacaggaaaaacctgaggagcacgatcgtggctaat
cagtcatcctcaggacaaagcaacagggagacaacctcagccaaaaccaaactcactgag
caaaacagtgctgctgagaatgcagggctggcatcagaaagcagcaaatttacagaccag
gaaaggcaaggcagtgagcacattccctatttgtctccatatcacagttcttcttacagg
tacgggaacatacctgctcatgcaaagcattatcaaagctatatgcaactgatccagcag
aagtctgctgtggagtatgcccaaagccagctcagcctggtgagcatgtgcaaagactca
cagaagtgtgcggagcccaagatggaatggaaagtgaaaataaggagcgatgggacgagg
tacatcacaaagagaccagttcgagacagaatcctgaaggaacgtgccttaaaaattaaa
gaggagcgcagtgggatgacgacagatgatgataccatgagtgagatgaagatgggtcgc
tactggagcaaagaagagcggaagcagcatttggtgcgtgctaaggagcagaggaggcgg
cgggagttcatgatgaggagcaggctggagtgtcttaaggagagtccacagagtggcagt
gagggcaaaaaggaaatcaacattattgaactgagtcacaaaaagatgatgaaaaagaga
aacaagaaaatcttggacaactggatgacaatacaagaactgatgacacatggtgctaaa
tccccagatggcacaagagtgcacaatgcctttttatcagttactactgtatga

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