KEGG   Corvus brachyrhynchos (American crow): 103615070
Entry
103615070         CDS       T08418                                 
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
cbrc  Corvus brachyrhynchos (American crow)
Pathway
cbrc04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    103615070 (DDX3X)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbrc03019]
    103615070 (DDX3X)
   03041 Spliceosome [BR:cbrc03041]
    103615070 (DDX3X)
   03036 Chromosome and associated proteins [BR:cbrc03036]
    103615070 (DDX3X)
Enzymes [BR:cbrc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     103615070 (DDX3X)
Messenger RNA biogenesis [BR:cbrc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     103615070 (DDX3X)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103615070 (DDX3X)
Spliceosome [BR:cbrc03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    103615070 (DDX3X)
Chromosome and associated proteins [BR:cbrc03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    103615070 (DDX3X)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Utp25_C Cas3-like_C_2
Other DBs
NCBI-GeneID: 103615070
NCBI-ProteinID: XP_017588937
LinkDB
Position
Unknown
AA seq 474 aa
MGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADG
PGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADI
GQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVE
QDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEPD
KRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQ
FRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN
ERNINITKDLLDLLVEAKQEVPSWLENMAYEQHHKGGGSRGRSKSSRFSGGFGARDYRTS
SGFGSSSSSSSRSTSSRSGGSGSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgggagaaattataatgggaaacattgaactcacacgctacacccgtcctactccagta
cagaaacatgcaatacctattattaaagaaaagagagacttaatggcctgtgctcagaca
gggtctgggaaaacggctgcatttcttctgccgatactgagccagatatatgcagatggc
cctggtgatgccttgagagcaatgaaggagaatgggaggtatgggcgccgtaagcaatat
ccaatctcactggtcttggctcccactagagaactggctgtgcagatctatgaggaagcc
agaaagtttgcataccgctccagagttcgcccctgtgttgtatatggtggtgcagacatt
ggccagcagatccgtgacttagaacgtggatgtcacttgcttgtagcaactccaggacga
ctggttgatatgatggagaggggaaagattggactggatttctgcaagtacttagtcctt
gatgaagctgacagaatgcttgacatggggtttgaacctcaaattcgtcgaattgttgaa
caagatactatgccaccaaaaggggttcgtcacaccatgatgttcagtgctactttcccc
aaggaaatccagatgcttgctcgtgacttccttgatgaatacatctttctggctgttggc
agagtaggttctacgtctgagaacattacacagaaagtagtgtgggtggaagagccagac
aaacgatcgttcctgcttgacctgctaaatgccacaggtaaagattccttgactttggtg
ttcgtggaaactaaaaaaggggcagatgctctcgaagacttcctgtaccatgaaggctat
gcctgtacaagtatccacggagatcgctcccagagggacagagaggaagcactgcaccag
ttccgctctggcaagagccccattcttgttgccacagcagtagcagcaagaggactggat
atctcaaacgtaaagcatgtcataaactttgacttaccaagtgacattgaggagtacgta
catcgtattggtcgtacgggccgtgtaggaaacctcggtcttgccacttcattcttcaat
gagaggaacataaacatcacaaaagacttgcttgatctccttgtggaggctaagcaagaa
gtaccatcttggctggagaacatggcttatgaacagcatcacaaaggaggaggcagccgt
gggcgatctaagagcagtcggttcagtggaggcttcggtgccagggattaccggacgagc
agcggcttcggcagcagcagctccagcagcagccggtcgaccagcagccgcagcggcggg
agcggcagcagaggcttcggaggtggtggttatggaggcttctacaacagtgatggatat
ggaggaaactataactcccagggggtggactggtggggcaactga

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