Corvus brachyrhynchos (American crow): 103615319
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Entry
103615319 CDS
T08418
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbrc03036
]
103615319 (MSH4)
Chromosome and associated proteins [BR:
cbrc03036
]
Eukaryotic type
Meiosis-specific proteins
Others
103615319 (MSH4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
nSTAND3
AAA_22
nSTAND_NTPase5
ATPase_2
AAA_28
AAA_30
AAA_18
Motif
Other DBs
NCBI-GeneID:
103615319
NCBI-ProteinID:
XP_017589305
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MCESYFGDKSSCVENANTLNLTSSSSVRGLNSTRVGKTPLSSGRSVCRSHTPLMGYSVTS
SSAVSAHTVASVIVAVVEGRGLARGEVGMASIDLKNPEVILSQFADNTTYAKVITKLKIL
TPLEIIMSNTACDAGNTTKLFSLITEHFKNVTFTTVQRKYFNETKGLEYIEQLCASEFST
IFMEVQSKYYCLAAAAALLKYVEFIQNAVYAPKSLKVRFQGSEKTAMIDSSSAQNLELVI
NNRDSRNGHTLLGVLNYTKTPGGSRRLRSNILEPLVDAETINTRLDCVQELLQDEELFFG
LQAVISKFLDTEQLLSVLVQIPKQDTVKTAESKITNLIYLKHTLELVEPLKAALRSCSTQ
LLKAYYNSLEDTRFGIILEKITTVINDDTRYTKGCLSMRTQKCYAVKPNINEFLDIARRT
YTEIVDDIAGMITQLAEKYSLPMKTSFSSARGFFIQMNADCSTLPNGQLPSEFTKITKMK
NTYSFTSADLIKMNERCQESLREIYHMTYLIVCKLLNEIYEHIHCLYKLSDIVSMLDMLL
SFAHACTLSDYVRPEFTDTLAIKQGWHPILEKIAMEKPVSNNTYLTEGNNFVIITGPNMS
GKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQIFTRIGMDDDIETNASTFMKEMKEIT
YIIQNANDKSLIIIDELGRGTSAEEGIGICYAACEYLLNLKAFTLFATHFLELCHIDALY
PNVENYHFEVQHVRSSAGNKEKIAYTYTLSKGYTEEKNYGLKAAEVSSLPSSIILDAKEI
TNHIAKQILHRQKSTPEMMKQRAAYQLAMRLVQTARNSRLDPDSLRVYLKGLKKKYEASC
PTPAKIDEQQ
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaatcatattttggggacaaaagttcttgtgtagaaaatgctaacaccttgaat
ctcacgagttcttcttctgtgcgaggcctgaatagcacacgtgtaggaaaaacacctctc
tcttctggtagatctgtttgcaggagccatacccctcttatgggatattcggttacatcc
tcatctgcagtttctgctcatactgttgcatcggttattgtagctgtagtagaaggaaga
ggccttgccagaggtgaagtagggatggccagtatagacttaaaaaatcctgaggtgata
ttatcacaatttgcagacaacacaacttatgccaaggttattactaaactcaagatttta
acaccgctagaaataataatgtcaaacactgcttgtgatgcagggaacacaacaaaattg
ttcagtctgataacggagcatttcaagaatgtgacttttacaactgtccagagaaaatac
ttcaatgaaacaaagggtttggagtacatagaacaattgtgtgcatctgaatttagcacc
attttcatggaggtccaatcgaagtattactgtcttgcagctgctgctgctttgctaaaa
tatgttgaatttattcaaaacgccgtttatgctcctaaatcgctcaaggtgcgtttccag
gggagcgagaaaacagctatgatagattcgtcatcagcacaaaatcttgaactggtaatt
aataacagagattctcggaatggtcacacacttcttggtgttctaaattacactaaaact
cccggtggaagtcgaagacttagatccaatatcctggaacctctagttgatgctgaaaca
attaacacaagactggactgtgttcaggaattactccaggatgaggagctcttttttggt
cttcaagcagttatctcaaaattcctggacacagaacaactactttcagttttggtacaa
attccaaagcaagatacagttaaaactgctgaatcaaaaataactaatttaatctacctg
aagcataccttagaacttgtggagcctctgaaagctgctttaagaagctgtagcacacag
ctgctaaaggcttattacaattctcttgaagatacaagatttggaattatacttgaaaag
attacaactgtaattaatgatgatacaagatacacaaaaggatgtctgagtatgaggacc
cagaagtgctatgctgttaagcctaacatcaatgaattccttgacatagctcgtagaaca
tacacagaaattgttgatgacatagcaggtatgataacgcaacttgcagaaaagtacagc
ctgccaatgaaaacaagtttcagctctgctcgtggattttttatccagatgaatgctgat
tgttcaacattacctaatggccagcttccttcagaatttacaaagatcacaaaaatgaaa
aacacatatagcttcacttcagcagatttaataaaaatgaatgaaagatgtcaggagtcc
ctgagagaaatatatcacatgacctacttaatagtgtgtaaactactgaatgagatctat
gaacacattcattgcttatacaagctgtccgacattgtgtctatgctggatatgctactt
tcatttgcccatgcctgcactctttccgattatgttcgtccagaatttaccgatacttta
gcaatcaagcagggatggcatcccattcttgaaaagatagctatggaaaaacctgtgtct
aacaacacgtacctgacagagggcaacaattttgtcattattacaggaccaaatatgagc
ggaaaatcaacatacctaaaacagattgctctctgtcaaattatggcacaaattggttct
tatgtcccagcagagtattgttcttttcgaatcgcagagcagatttttaccagaataggt
atggatgatgatattgaaacaaatgcatccacgttcatgaaggaaatgaaagagataaca
tacatcatacaaaatgctaatgataaatcactcatcattattgatgaacttggcagaggt
accagtgctgaagaaggtatcggcatttgttatgctgcctgtgaatatctgctgaattta
aaggcatttacactgtttgctacacacttcctggaactatgccatatagatgctttatat
cccaatgtggaaaactaccattttgaagtgcaacatgtgagaagcagtgctggaaataag
gagaaaattgcttacacttacacactttctaaaggatacacagaggaaaaaaactacgga
ctaaaggctgcagaagtgtcctccctaccatcatccataattttggatgcaaaggaaatc
acaaatcacattgcaaaacaaattttgcacaggcagaaaagcactcctgagatgatgaaa
cagagagctgcataccagttagcaatgagattggttcagactgccagaaactctcgactg
gacccagacagtttgcgtgtatatttgaaaggcctgaagaaaaagtatgaagccagttgt
cccacacccgcaaaaattgatgagcaacagtaa
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