Corvus brachyrhynchos (American crow): 103615328
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Entry
103615328 CDS
T08418
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103615328 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrc03019
]
103615328 (LSM1)
Messenger RNA biogenesis [BR:
cbrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103615328 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
103615328 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF658
PhyR_sigma2
Motif
Other DBs
NCBI-GeneID:
103615328
NCBI-ProteinID:
XP_008631574
LinkDB
All DBs
Position
Unknown
AA seq
124 aa
AA seq
DB search
MPSRGNGKPRVLRRDGRTLIGSLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGE
NVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQAKQESEKLKVQALKERGLSVPRADT
LDEY
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccgcgggaacgggaagccgcgggtgctgcggcgggacggccggacgctcatc
gggtccctgcgcagcatcgaccagttcgcgaacttggtgttgcaccagactgtggagcgc
atccacgtgggcaagaagtatggggacatccctcggggcatcttcgtggtgaggggcgag
aatgtggtgctgctgggggaaattgatctggagaaggagagtgacacacctctgcagcag
gtgtccatcgaggagatcctggaggagcagcgggtggagcagcaggccaagcaggagtca
gagaagctgaaggtgcaggcgctgaaggagcggggcctctccgtcccgcgggcggacacg
ctggatgagtactga
DBGET
integrated database retrieval system
