KEGG   Corvus brachyrhynchos (American crow): 103615369
Entry
103615369         CDS       T08418                                 
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
  KO
K18412  trinucleotide repeat-containing gene 6 protein
Organism
cbrc  Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbrc03019]
    103615369 (TNRC6A)
   03036 Chromosome and associated proteins [BR:cbrc03036]
    103615369 (TNRC6A)
Messenger RNA biogenesis [BR:cbrc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103615369 (TNRC6A)
Chromosome and associated proteins [BR:cbrc03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    103615369 (TNRC6A)
SSDB
Motif
Pfam: TNRC6-PABC_bdg Ago_hook RRM_1 RRM_occluded
Other DBs
NCBI-GeneID: 103615369
NCBI-ProteinID: XP_017589463
LinkDB
Position
Unknown
AA seq 1954 aa
METNTTFCSRELEAKATKEVERKLSRAFLPHLCGTERRDLVQEEEEQLMEERKKRKEDKK
KKEAAQKKAIEQKIKVPEQTKTSVSQPQPVTSNGTSTGTSTTNNAKRAPASSQQQPLPRY
PPREVPPRFRHQEQKQLLKRGQQLPVIAANLGSTPKVLNGQSGGSTGTNNQPVTNGEVPN
SSKKQPGMPPIRDLVSHSPNQSDLNHSGLGSHYENSHWGPVSSNSDSSTNWDKVIVDGSD
KEAWPSITGSDPELTSECMDTDSASSSGSERNLVIMASGSTGGESDGIRNGIGHGSQNKF
VVGSNSNNVGNGSINGPWGLSHGSIISTCQVSVDAPDSKSESSNNRMNAWGTINSSSNGG
LNPSTLNSNGNHGAWSVLENSGHALKGSVGSGSPGTSIQCSTIGQMANSQSINSKVGGSA
HGSWGSLQESCDSEVNGTRNVSFSGQPQNLNTEMNGPNNTTNFMTSSLPNSAGSVQMNEL
PNTAGPGAWRVSTMNHSQIQASPVANGTSISHLSNGEAKTGGSYGTTWGAYGSSYSGDKC
PGPNSQANGDTVNATLMQPGGSGPGSTNFQINGNKGGGVWEAGTVNSQNVPWGNGNGASA
GGSRRGWGNPAQNTGTNISNGEWSKLPSNQHSNEGVNGNSRKFTNGWKSTEEDDLNSQSS
AASQMAEQSSTWAKTGTGDSEGSSESTGCHEDRAAVEGQNRERRKVDQHTLLQSIVNRTD
LDPRVLSNSGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGGSVTQTSSSGGCVDRPSP
NNNDTSSVSGWGDPKSATRWGDSKGSNSQGGWEEDSAATVMVKSNQSWGSGKEEKSSWND
TPKMKQGWGDGQKASQGWAVSAGDSWGENSRSNHWGEAKKSSSGGSNSDRSVSGWNEPGK
SNSVTWGGNNATPNNSSGWDEPAKSNQNQGWGDPPKSNQPQVWGDSSKPVNSPEWNKQDV
GSWGAPSAANKPPGSGWLGGPMPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSK
YNYKNVNMWNKNVPNSSSSSDQQAQVHPQLLSSSAMSSKESSSGSGWGEPSTPATTVDNG
TSAWGKPMDTGTSWGEPVSDAGGTSGWGNASLGQQPPNKPGPKSMQDSWCGDDMPLTGSR
QTSWEEEEDVEIGMWNSSSSQEANPSLNWPPYMKKMPTKGIMKGGNKQDETWINPFIKQF
TNLSFSRESPEETIQSNKMDMSGGLLQDKRMEMDKHGLGVGDYNRVVGKGPGSRPQIPKE
SSMDRGPYFDKDGIVADESQNMQFMSNQNMKLPPSNNALPNQALGSLTGLGMQSLNSVRQ
NGNPSVFGVGNIAAQPRSMQQPPAQPLNSSQPNPRAQVPPPLLSPQVPVSLLKYAPNSGG
LSPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQKAQPQRSMPSGGRQQQEQQGRSLS
MQQQMMQQSRQLDPNLLMKQQTPPSQQQSLHQPSMKSFLENVIPHATPELQKGPSPINAF
SSFPIGMNSNLNVNRDMSSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSGFRLED
SPFVPYDFMNSSNSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPET
DPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVSLSST
AQSTSVARNSDSKSTWSPGSVTNTSLAHELWKVPLPPKSITAPSRPPPGLTGQKPPLSTW
DNSLRLGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPLI
TFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQGQSLTP
SPGWQSLGSSQSRLGSIDGSHSFSNRNDLNHWNGAGLSGTSSGDLHGTSLWGSPNYSTSL
WGAPSSNDTRGISSPSPINAFLSVDHLGGGGESM
NT seq 5865 nt   +upstreamnt  +downstreamnt
atggaaaccaataccactttctgttccagagaattggaagctaaagctaccaaagaagtc
gaaagaaaactaagcagggctttcctgcctcatttatgtggaactgagagaagggattta
gtgcaagaagaggaagaacagttgatggaagaaaggaaaaagagaaaagaagacaagaag
aagaaggaagctgctcaaaaaaaggccattgaacaaaaaatcaaagtgccagaacaaacc
aagacaagtgtaagccagccccagcctgtcacctccaacggcacttccacaggaaccagc
actactaataatgccaagcgggccccagccagcagccagcagcagcccttgcctcgatac
cctcctcgggaagtaccaccgcgattccgacaccaggaacagaaacagcttctgaaacga
gggcagcagttaccagtgatagctgcaaacctgggatccactcccaaagtgttaaacggc
cagtcaggaggcagcactggcaccaataaccagcccgtgaccaacggagaagtgcccaac
agcagcaaaaaacagccaggcatgcctcccattcgggacttggtgagccactcccctaac
cagtcagatctgaaccacagtggtctaggatcccattatgaaaattctcactggggacca
gtctcttcaaatagtgactccagcacaaactgggataaagttatcgtagacggctctgac
aaagaagcatggccatcaatcactggcagtgacccagagctgacttcagaatgtatggac
actgactctgcctccagctctgggtcggagcggaacctcgttatcatggcttcagggagc
acaggcggagaaagcgatggcattcgcaatggcatcggacatgggtctcagaataagttt
gtggttggtagcaacagcaataatgtgggcaatggaagtattaatgggccgtgggggtta
tcccatggatccataataagcacatgtcaagtttctgtggatgctcctgacagcaaatct
gaaagtagcaacaatagaatgaatgcttggggcaccataaactcttcatcaaatggaggg
ttaaatccaagcactttgaattcaaatggcaaccatggtgcctggtccgtgttggagaac
agtggacatgccctgaaagggtccgtggggagtgggagtcctggcacaagcattcagtgc
agtaccataggtcagatggccaacagccagagtattaactcgaaagtgggtggctcagcc
cacggttcctggggaagccttcaggaaagttgtgattctgaagtaaatggtacaaggaat
gtttcattcagtgggcaacctcaaaaccttaacactgaaatgaatggaccaaataacact
actaactttatgacctctagtttaccaaactctgctggttcggtgcagatgaacgaactg
cccaacactgcagggcccggggcctggcgcgtgagcacaatgaatcattctcagattcag
gcctctccagtggcaaatggcacttccatctctcacctgagcaacggtgaggccaaaact
ggcggctcttatggtactacctggggtgcctatggttctagttactctggagacaaatgt
ccaggcccaaacagccaagctaatggtgacactgtgaatgcaactctaatgcagccgggc
gggagcgggcctggcagcactaactttcaaatcaacgggaataaaggcggaggggtgtgg
gaggcagggacagtcaactcccagaatgtgccgtggggaaacgggaatggtgcgagtgct
ggcgggagcagaagaggatggggcaaccctgcacaaaacactggcaccaacatttccaac
ggggaatggagcaaactgcctagcaatcagcattccaatgaaggtgtgaatggaaacagc
aggaagtttacaaatggatggaagtctactgaggaggatgatctcaacagccagagttct
gctgcctcccagatggctgagcagagcagcacatgggccaaaacaggtacgggggacagc
gaggggagctcagagagcaccgggtgccatgaagacagagcagctgtggaaggccagaac
cgagagaggaggaaagttgaccagcacacattactccaaagcatagtgaacagaactgac
ttagatccacgtgtcctttccaactctggttggggacagactccaatcaaacagaacact
gcctgggatactgaaacatcaccgaggggtgaaagaaaaactgacaatgggacagaggcc
tgggggggctctgtgacacagacttccagctcaggggggtgtgtggatagacctagccct
aataataacgatacctcatctgtatcggggtggggagatccaaagtctgctacaaggtgg
ggagactccaaagggtcaaacagccagggggggtgggaagaagattctgctgctacagta
atggtcaagagcaatcaatcatggggaagtggcaaagaggaaaagtcatcctggaatgac
acaccgaagatgaagcagggatggggagatggacagaaggccagccagggttgggcagtg
tctgctggtgatagctggggtgaaaactctagaagtaaccattggggtgaggcaaagaaa
tccagttccggaggtagcaacagcgacaggtccgtgtctggttggaatgagccaggtaaa
tcaaattctgttacttggggaggcaataatgcaaccccaaacaactcttcaggatgggat
gagcctgcaaagtctaatcagaaccagggctggggagaccctccgaaatccaatcagcct
caagtctggggggactcgtcgaagccagtcaattctcctgagtggaacaaacaagatgtt
ggctcttggggagccccgtctgccgcgaacaaacccccggggtctggctggctggggggg
ccaatgccagccccagcaaaggaggaagagcccacgggctgggaggagccatcccccgaa
tccatacgccggaaaatggagattgatgatggaacttctgcttggggtgatccaagcaaa
tacaactacaaaaatgtgaatatgtggaataaaaatgtcccaaacagtagcagcagttca
gaccagcaagcacaggtacatccgcagctactgtcttcaagtgccatgtctagcaaggag
agcagttcgggttctggttggggagagccttctactccagccactactgtagataacggg
acttcagcgtggggtaagcccatggacactggtacgagctggggagagcccgtcagcgat
gcaggaggcacctctggctggggaaacgcttctcttgggcagcagcctccaaataaacct
gggcctaaatctatgcaagatagttggtgtggagatgatatgccattgactggcagtcgt
cagaccagctgggaggaagaggaggatgttgagattggaatgtggaacagcagttcctca
caagaagctaacccatcgttaaactggccaccctacatgaaaaagatgcccacaaaggga
ataatgaaaggtggaaataagcaagatgaaacatggatcaatccattcattaagcaattc
acaaatctcagtttttcaagagaatcaccagaagaaaccatacagagcaataagatggac
atgtctggagggttactgcaggacaagcggatggagatggacaagcacggcctgggcgtg
ggagattacaatcgtgtggttggcaaaggccctggttctcgtccccaaattcccaaagag
tcttccatggatcgcggtccttacttcgataaggatggcattgtagcagacgagtcccaa
aacatgcagtttatgtccaatcaaaacatgaagcttcccccttcaaataatgcactacct
aaccaagccctgggctcccttacagggctgggtatgcaaagcttgaattctgttagacag
aatggcaatcccagtgtgtttggtgttgggaatatagcagcacagcccaggagcatgcag
cagcctccagcacaacctcttaattcatctcagcctaatccacgtgctcaagtgcctcct
ccattactatcccctcaggttccagtatcattactgaagtatgcaccaaacagcggtggc
ctgagcccactttttggcccacaacaggtagccatgttgaatcaactgtcccagttaaac
cagctttctcagatctcccagttacagcggctgttggctcagcagcagaaggctcagcct
cagaggagcatgccttctgggggtcggcagcagcaggagcagcagggtcgatctcttagt
atgcagcaacagatgatgcaacagtcccgtcagcttgatccaaacctgttaatgaagcag
caaactccaccctctcaacagcagtcactccatcagccctccatgaaatccttccttgag
aatgtcataccccacgctactcctgagctgcagaaagggccgtcaccaatcaatgctttc
agcagcttccctataggaatgaactcaaacttgaatgtaaaccgggatatgagcagtatt
aaagagccacaatctcggctgaggaaatggactacagtcgacagcatttctgtgaacaca
tccttagatcaaaactccagcaaacatggtgctatttcaagtggttttaggctggaagat
tctccgtttgttccttacgactttatgaacagcagtaattcgccagccagtcctcccgga
tccattggggacggctggccccgtgccaaatcgcctaatggctctagcagtgttaactgg
cccccagagtttcgccctggtgagccatggaaaggttatccaaacatcgaccccgaaact
gacccttacgtcactcctggcagtgtcataaacaatctctcaattaatactgtgcgggaa
gttgaccacctcagggacaggaacagtgggtcatcctcatctttgaacaccacgctgcct
tcaactagtgcctggtcatccattcgtgcctccaactacaatgtttccctcagcagtaca
gcacaaagcacttcagtagccagaaacagtgattccaaatcaacatggtctcctggatca
gtcactaacacctctctggctcatgagctgtggaaggtccctttgccacctaaaagcatc
actgctccgtcccgcccacctccagggctgacaggccagaaaccacccctgtccacttgg
gataattcccttcgtctgggtggaggatggggaaattctgatgccagatacacccctggt
tcaagctggggtgagagcagctcagggagaataacaaattggcttgttctaaaaaacctt
acacctcagatcgacggctcaaccctgcgtactctgtgcatgcagcacggcccactaata
acattccacctgaacctcccacatggtaatgctttggtccgttacagttcaaaagaagag
gtagtgaaggcacaaaaatctctgcacatgtgtgttttagggaacactactattcttgct
gagtttgccagtgaagaggagattagtcgcttctttgcacaaggccagtccctgactccg
tctcctggctggcaatctctgggatccagccagagccgactcggatccatcgatggttcc
cattcgttctcaaaccgtaatgatctaaatcactggaatggtgctgggctgtcgggaact
agcagtggagaccttcatggcacttcactttgggggagccccaactattccacgagcctg
tggggtgccccgagcagcaatgacaccaggggaattagcagcccatcccccatcaacgct
ttcctttctgttgaccacctgggtggaggtggagagtccatgtaa

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