Corvus brachyrhynchos (American crow): 103615389
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Entry
103615389 CDS
T08418
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc00260
Glycine, serine and threonine metabolism
cbrc00630
Glyoxylate and dicarboxylate metabolism
cbrc00670
One carbon pool by folate
cbrc01100
Metabolic pathways
cbrc01200
Carbon metabolism
cbrc01230
Biosynthesis of amino acids
cbrc01240
Biosynthesis of cofactors
cbrc04981
Folate transport and metabolism
Module
cbrc_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
103615389 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
103615389 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
103615389 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
103615389 (SHMT1)
Enzymes [BR:
cbrc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
103615389 (SHMT1)
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Paralog
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
103615389
NCBI-ProteinID:
XP_008631647
UniProt:
A0A091ERQ0
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MASSTQGLPSAELWASHNKMVMEPLETNDPEVHSIIKKEKQRQRLGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEFVDELERLCQKRALQAYQLDPQKWGVNVQPYSGS
PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSVFFESMPYKVNPKTGYI
DYDQLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADNNGAYLMADMAHISGLVAAGVV
PSPFDHCDIVSTTTHKTLRGCRAGMIFYRKGTRSVDPKTGKETLYNLESLINQAVFPGLQ
GGPHNHAIAGIAVALRQAMTPEFKAYQQQVVANCKALSTALMEMGYDIVTGGSDNHLILV
DLRSRGTDGGRAERVLQLCSIACNKNTCPGDVSALRPSGLRFGTPALTSRGFRQDDFCKV
AQYIHRGIELALRVQKDMSPKATLKEFKDKLEEPKYCGELKALKEEVEAFAATFPLPGLP
VL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcaagctcaacacagggcctccccagcgccgagctctgggcctcccataacaagatg
gtgatggagccgctcgaaaccaatgacccggaggtgcacagcatcatcaagaaggagaag
cagcggcagaggctggggctggagttaatcgcgtcggagaacttcgcaagccgagcagtc
ctggaggccctgggatcctgcatgaacaacaaatactccgagggttacccaggacagagg
tactatggcgggacagagtttgtggatgagctggaaaggctgtgccagaagcgagccctg
caggcctaccagctcgacccccagaagtggggagtcaatgtccagccctactcagggtca
cccgcaaactttgcggtgtacacagccctggtggagccccacggcaggatcatggggctg
gacctgcccgatggtggccacctcacccatgggttcatgacggacaagaagaagatctct
gccacctctgtcttcttcgagtccatgccctacaaggtcaaccccaagaccggttacatt
gactatgaccagctggaggagaacgcccggctcttccaccccaagctgatcatagcaggt
gtcagctgctactcgcggaacctggactacgcccgcatgcggaagatcgctgacaacaac
ggggcttatctgatggccgacatggcccacatcagtgggctggtggccgctggcgtggtg
ccctcgcccttcgaccactgcgacatcgtctccaccaccacccacaagaccctgcggggc
tgcagggccggcatgatcttctaccgaaaaggcacccgcagcgtggaccccaagacaggc
aaggagaccctctacaacctggagagcctcattaaccaggcggtgttcccggggctgcag
ggaggcccacacaaccacgccattgcagggatcgctgtggcgctgcgtcaggccatgacg
cccgagttcaaggcttaccagcagcaggtggtggccaactgcaaggcgctctcgactgca
ctgatggagatgggctacgacatcgtcacagggggctctgacaaccacctgatcctcgtg
gatctgcgcagcagaggcacagacggcggccgggccgagcgggtgctgcagctctgctcc
atcgcctgcaacaagaacacgtgccccggtgatgtcagcgccctgcgccccagtggcctc
cggttcgggacgccagctctcacctcccgcggcttccggcaggacgatttctgcaaggtg
gcccagtacatccacagagggatcgagctggctctgcgcgtgcagaaggacatgagcccc
aaggccacactgaaggaattcaaggacaaactggaggagccaaaatactgtggggagctg
aaggcactgaaggaagaggtagaagccttcgcagccacgttcccactcccggggctgcct
gtcctgtaa
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