Corvus brachyrhynchos (American crow): 103615550
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Entry
103615550 CDS
T08418
Symbol
CACNA1H
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04010
MAPK signaling pathway
cbrc04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103615550 (CACNA1H)
04020 Calcium signaling pathway
103615550 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbrc04040
]
103615550 (CACNA1H)
Ion channels [BR:
cbrc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
103615550 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
103615550
NCBI-ProteinID:
XP_017589767
LinkDB
All DBs
Position
Unknown
AA seq
2237 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVECQSERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDRNFAMTYNLTFLHPYYRPDEAEE
NPFICSSHRENGMQRCSNIPSRKESKVECTLSMDSYSPSLASPEPTRTYCILAKKNPASW
NQYYNVCMAGDVNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFI
LLIIVGSFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEEL
LKYICHIFRKVKRRTIRLYNNWQSKRRKKVNPNSSSSGQSQRSRRRITSIHHLIHHHHHH
HHHHYHISNGSPRGPRANPEICELELQVMKPGRQLMLPPPPSPRPQGPAAPRADAEAVHS
IYHADCHVEGPPGGCKAPSAPAGSKLAGLATHGSMNYPTILPSPGSKGGSTPLPKGKKNG
NSPVAVVNSPGNLGLDSYGKLQQLVGEHGLRRTPSRLVGVGPAGGPPSPFTQDLRHGDHR
DQLQQQRVRRRRKKKKAKERNKVTKLWRAFGTKLKRIVESKYFNRGIMIAILINTLSMGI
EYHEQPDELTNALEISNIVFTSMFALEMLLKLLAFGIFGYIKNPYNIFDGIIVVISVWEI
IGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSIL
GMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAA
LYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSANFEDEFEKLKDFRATE
MKMYSLAVTPNGHLEGRGAMPPPIIMRTAATPMPTPKCSPHLDSLHAFGDSRRGSNASLE
PTGYDQKSLSSLRSSPCANWGTSSNWGSRRSSWNSLGRAPSLKKKNQSGERESLLSGEGK
GSTDDDSDDAKSSTLSRPSLPRRAESLDYRGSLERPELLRVPSVRQLGLGPAALLPAEFH
DCNGKMGHGPGEFFLRVDGHKEDALDYEDDMEDSYCYRIRKALEPYKPRWCKTHEDWSLY
LFSPQNRFRVMCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDPLSTERIFLSVSNYIF
TAIFVAEMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIIDIIVSMASAGGAKILGVL
RVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGK
FYYCDGPDVKNITTKADCTNAHYKWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLD
AVGIDQQPIQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRGEE
SRLRRLEKKRRSKEMYLSEAQRRPYYADYSPARRYIHSLCTSHYLDLFITFIIGVNVITM
SMEHYNQPKSLDEALKYCNYVFTIVFVFEALLKLVAFGFRRFFKDRWNQLDLAIVLLSIV
GITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGL
LFMLLFFIYAALGVELFGKLDCSDENPCEGLSRHATFTNFGMAFLTLFRVSTGDNWNGIM
KDTLRECTREDKHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDA
EMDAEIELEMSRGTNAAGGSRGGAGAPESRALHGNQEHTKAVLQGKHQALGSAASLRPQD
SQNLLTVRKISVARMHSLPNDSYMFRPVTPAKAPFPLHEVEMETYPCKAQRGSITSIRSQ
PVGTSSSLRVPTESLPLAARSPGHEGRHRWKALPPHGTPRSPALNKLLCRQEAVRTDSVD
GQTQERKDSLQAEPGEPQPSAKQPQSTLTPSPLHSPLPGCQGEPSDLADEEVRHINSSAK
DWAEEHSDPSSRSTSPFTSPAPSPVPLKNCSTSSLSCKEKDLKKFYSTDTKGFLSKPSWA
DEQRRHSIEICPSGGAPDCGFQDPAEDKQRPPAHVQPEADYIHGARRKKKMSPPCISIDP
PMEDDTGAAPRTKPSENTLLRRRTPSCEFPAYRESLELTESQPPCRGEHLSIPNFSFEQL
DGGSLSSLSELLDSGQSTPASMDSRPDAELKKPDHLKTQWSNGERSKELLGTAKSPLRKQ
DLGPVTVATEEGTDDPV
NT seq
6714 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgatcctgctcaactgcgtcaccctgggcatgttccagccctgcgaggacgtg
gaatgccagtcggagcgctgcaccatcctggaggcgtttgacgacttcatcttcgccttc
tttgccgtggaaatggtcatcaagatggtggccctgggcatcttcgggcagaagtgttac
cttggggacacctggaatcgcctggacttcttcatcgtcatggcagggatgatggaatat
tccctggatggacacaacgtgagcctctccgccatccgcaccgtccgcgtcctgcggcca
ctgcgggccatcaacagggtcccaagtatgaggatcctggtgaccctgctgctggacact
ctgcctatgttaggcaacgtcctcctcctgtgcttcttcgtcttcttcatcttcgggatt
gtcggggtccagctctgggcggggctgctgaggaacaggtgcttcctagacaggaatttt
gccatgacgtacaacctgaccttcctgcacccctactaccggccggacgaggcggaggag
aaccccttcatctgctcctcgcaccgggagaacgggatgcagaggtgctccaacattccc
agcaggaaggagtccaaggtggagtgcaccctgagcatggattcctacagccccagcctg
gccagccccgagcccaccaggacttactgcatccttgcaaaaaaaaatcctgcatcatgg
aaccagtactacaacgtctgcatggccggggacgtgaacccccacaacggggccatcaat
tttgataatattggatatgcctggattgctatttttcaggtgataaccctggaaggatgg
gtggacatcatgtattacgtgatggatgcacattctttttacaattttatatattttata
ctgctcatcatagtcggctccttcttcatgattaacctgtgcctggtggtgatagcgacc
cagttttcggagaccaagcagcgggagaaccagctgatgcaggagcagcgggcgcgctac
ctgtccaacgacagcaccatcgccagcttctcggagccgggcagctgctacgaggagctg
ctcaagtacatctgccacatcttcaggaaggtgaagcgaaggacaatccgcctctacaac
aactggcagagcaaacgccggaaaaaagtcaaccccaacagcagcagcagcgggcagagc
cagcgcagcaggaggagaatcacctccatccaccacctgatccaccaccatcaccaccac
caccaccaccactaccacatcagcaacgggagcccccgtgggcctcgtgccaaccccgag
atctgcgagctggagctgcaggtgatgaagcctggcaggcagctgatgcttccccctcct
ccctcgcccaggccgcagggccctgctgctccccgtgccgatgccgaggccgtgcacagc
atttaccacgcggattgccacgtggaggggccccccgggggctgcaaggctcccagtgcc
cctgctggcagcaaactggccgggctggccacccacggcagcatgaactaccccactatc
ctgccctcccctggcagcaagggcggctccacgccccttcccaaagggaagaagaacggg
aattctccggtggccgtggtgaacagcccagggaatttgggcctggattcttacgggaag
ctgcagcagctggtgggagagcatggtctccgccggacgcccagccggctggtgggggtg
ggccccgccggggggccgcccagccccttcacgcaggacctgcggcacggcgaccaccgg
gaccagctccagcagcagcgggtcaggaggaggaggaagaagaagaaagccaaggagagg
aacaaggtgacaaagctgtggcgggcgttcggcaccaaactcaagcggatcgtggagagc
aaatacttcaaccgcgggatcatgatcgccatcctcatcaacaccctcagcatgggcatc
gagtaccacgagcagccagacgagctgaccaacgccttggagatcagcaacatcgtcttc
accagcatgtttgccctggagatgctcctgaaactcctggcctttggaatctttggctac
atcaagaacccctacaacatcttcgacgggatcatcgtggtcatcagtgtctgggagatc
atcgggcagtcggacgggggcctgtccgtgctccggacgttccggctgctccgcgtgctg
aagctggtgcgcttcatgcccgccctgcgccgccagctcgtggtgctcatgaagaccatg
gacaacgtggccaccttctgcatgctgctcatgctcttcatcttcatcttcagcatcctt
ggcatgcacctttttggatgcaagttcagcctgaaaaccgacacgggagacacagttcca
gacaggaagaattttgattccttactctgggccatcgtgaccgtgttccagatcctcacg
caggaggactggaacgtggtgctctacaacgggatggcctccacctcctcgtgggccgcc
ctctacttcgtggccctgatgacctttggcaattacgtgctcttcaacctgctggtggcc
atcctggtggaaggattccaggcagagggagatgccaacaggtcagacacagatgaggac
aagacatctgccaacttcgaggatgagtttgagaagctgaaagacttccgagcaacagag
atgaagatgtactccctggctgtcacccccaacgggcacctggagggcaggggggccatg
cccccgcccatcatcatgcgcacggcggccaccccgatgcccaccccaaagtgctcccca
cacctggactccctgcacgccttcggggactcgaggagaggcagcaacgcctcgctggag
cccacgggctacgaccagaagtccttgtccagccttcgcagctccccctgcgccaactgg
ggcaccagcagcaactggggcagccgtcgctccagctggaacagcctgggcagggccccg
agcctcaagaagaagaaccagtcgggagaacgggagtccctgctgtccggagagggaaaa
ggcagcacggacgatgactcggacgatgccaagtccagcacgctcagccggccctcgctg
ccccgccgggcggaatccctggattaccgcggctccctggagcggcccgagctgctccgg
gtgccctctgtgcgccagctcggcctggggcccgcggctctgctgcccgccgagttccac
gactgcaatggcaagatgggccacggccccggagagttcttcctgagggtggatggccac
aaggaggatgccctggactacgaggatgacatggaggatagttattgctaccggatccgc
aaagccctggagccctacaaaccccgctggtgcaagactcacgaggactggtccctctac
ttgttttccccacagaacaggttccgagtgatgtgccagaaggtcattgcccacaaaatg
tttgaccacgtggtgctggtctttatcttcctcaactgcatcaccatagctctggagaga
ccagacatcgaccccctgagcacggaaaggatattcctgagtgtctctaattacatcttc
actgccatctttgtggctgaaatgatggttaaggtggtggcccttggctttttctctggg
gagaacacctacctgcagagcagctggaacgtcctggatggagtcctggtctttgtatcc
atcattgacatcatcgtgtccatggcatcagcaggaggagccaaaatcctgggagtcctt
cgtgtgttgaggcttctgcggaccctgagacctctgcgagtcatcagcagagccccaggt
ctgaagctggtggtggaaaccttgatctcctccttgaggcctattgggaatattgttctc
atctgctgtgctttcttcatcatctttgggattttaggggtccagctttttaaaggcaag
ttctactactgtgatggccctgatgtcaaaaacatcactacgaaggccgactgcaccaac
gctcactacaaatgggtccggaggaagtacaacttcgacaatttggggcaggccctgatg
tccctgtttgtcctctcctccaaggatggctgggtgaacatcatgtacgatgggctggac
gctgtgggcattgaccaacagcccatccagaaccacaacccttggatgctgctctacttc
atctccttcctgctcatcgtcagcttcttcgtgctcaacatgttcgtgggggtggtggtg
gagaacttccacaagtgccggcagcaccaggaggcggaggaggcgcggcgcggggaggag
agtcggctccgccgcctggagaaaaagcgcaggagtaaggagatgtacctgtctgaagcc
cagcgccggccctactacgccgactactcgccggcgcggagatacatccacagcctgtgc
accagccactacctcgacctcttcatcaccttcatcatcggcgtcaacgtcatcaccatg
tccatggagcactacaaccagcccaagtccctggatgaagccctcaagtactgcaactac
gtgttcaccatcgtctttgtgttcgaggcgctcctgaagttggtggcctttggtttccgg
aggttctttaaggacaggtggaatcagctggacttggccatagttctcctgtcaatcgtg
gggatcacgctggaggagatcgagatgaatgctgcgcttcccatcaatcccaccataatc
cggatcatgagggtgctcaggatagccagagtgctgaaactgctgaaaatggccacgggc
atgagagctctgctggacacggtggtgcaagccctgccccaggtagggaaccttggccta
ctttttatgctcctgttttttatctatgctgccctgggagtggaattgtttggcaagctc
gattgcagtgatgagaacccctgtgaaggcctgagccgccacgccaccttcaccaacttc
ggcatggccttcctcaccctcttcagggtgtccacgggggacaactggaatgggatcatg
aaggacacgctccgggaatgcactcgggaggacaagcactgcctcagttacctgcccgtc
atctcccccgtctacttcgtcaccttcgtcctcatcgcccagttcgtcctggtcaacgtg
gtggtggcagtgctgatgaagcacctggaggagagcaacaaggaggccaaggaagatgct
gagatggatgctgagatcgagctggagatgtccagaggaaccaatgctgctggcgggagc
cggggtggggccggggcccctgagagccgggcgctgcacgggaaccaggagcacaccaag
gccgtgctgcaggggaagcaccaagccctgggcagtgcagcctccctgaggccccaggat
tcccagaacctgctgaccgtccgcaagatctccgtggcccggatgcactccctgcccaac
gacagctacatgttccggcccgtgactccggcaaaggccccgttccccctgcacgaggtg
gagatggagacgtatccctgcaaagcccaaagaggatccatcacctccatccgctcccag
cccgtggggacgagttcctcgctgagagtgcccacggagtcgctgccgctggccgcgcgc
tcccccggccacgaagggcggcaccgctggaaggcccttcccccccacggcaccccccga
tctcctgctctcaacaagctgctctgcagacaggaggccgttcggacagactcagtggac
ggacagactcaggagcgcaaggacagcctgcaagcagagcctggagagccccaaccatca
gcaaagcagccccagagcaccctcacccccagccctctccattcccccctccccggctgc
cagggcgagccctcggacctggctgacgaggaggttcggcacatcaacagctcggccaaa
gactgggcagaggagcactcggaccccagcagccgctccacctcacccttcacctcgccg
gccccgtcccccgtgcccctcaagaactgcagcacaagcagcctctcctgcaaggagaag
gacttgaagaagttctacagcaccgacaccaagggcttcctcagcaagcccagctgggcc
gatgagcagcggcgccattccatcgagatctgcccctccggcggcgccccggactgcggc
ttccaggaccccgctgaggacaagcagcggccccctgcccacgtccagccagaggccgac
tacatccacggagcccggaggaagaagaagatgagcccgccctgcatttctatagatcct
cccatggaggatgacaccggggcggccccgcgcaccaaaccctccgagaacaccctgctg
cggaggaggaccccgtcctgcgagttcccggcctaccgagaatccctggagctcacggag
agccagcccccgtgccgcggggagcacctcagcatccccaacttctccttcgagcagctg
gacggcggctccttgagcagcctctcggagctgctggacagcggccagtccacaccggcc
tccatggactcgcggccggacgcggagctgaaaaagccggatcacttaaaaactcagtgg
agcaacggcgagaggagcaaagagctgctgggcactgccaagagccccctgcggaagcag
gacttgggccccgtgactgttgccacagaagaaggcacggatgacccagtatag
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integrated database retrieval system
