Corvus brachyrhynchos (American crow): 103616407
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Entry
103616407 CDS
T08418
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103616407 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrc03019
]
103616407 (TTC37)
Messenger RNA biogenesis [BR:
cbrc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
103616407 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_16
TPR_11
TPR_12
TPR_8
TPR_CcmH_CycH
TPR_17
TPR_9
ANAPC3
TPR_15
TPR_6
ARM_TT21_C
BTAD
TolB_N
TPR_30
TPR-S
HAT_Syf1_M
Fis1_TPR_C
TPR_20
Retrotran_gag_2
TPR_5
Motif
Other DBs
NCBI-GeneID:
103616407
NCBI-ProteinID:
XP_017590907
LinkDB
All DBs
Position
Unknown
AA seq
1561 aa
AA seq
DB search
MSNKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKPNQIDVKGDLAHVYQKLLELYESGDKQKWCDVCN
KLVELYYQEKKYLEVAETWQKLIQMKQEEGAEKAELHQLWKKMIQLLKDSTRNQDNKTGQ
LLLTAFEHALNSADVVPGEDHQNLYKDFIQCLSKFPHEVARLEKACHDMMALYPTMSYPL
EVLCLHFIHSGTLSEKALHCFSRLLEMDASSGPGIIGFGIKCLKEKKYKEAVKSLTEGLQ
KTNQCPAAWHYLAEAQMKIHEHRNAVLSCNQALEALGTPEGPNLRWKNLALQLKAETLIK
IADADAAEEAIKALEQTVDASSDPVVSALRGQAYLNKGLMDQASKISQELLLSHPDLAEA
HALEGFIHYSQKNYEQAEKSFLSAIEKKAGTAEYHQYLGLTYWFMSDETKKDKGKALTQF
LKAAKFDSYLGSAFCYLGNYYRDIAGDKSRARGCYKKAFELDETDEESGTAAVNLSMELG
DMDTALSILNEVTGKARPGTAKWAWLHRGLYYLRTGQPSQAVADLQAALRADPKDSNCWE
SLGEAYLNRGSYSTALKSFRKASELNPGLVYSIYRAAALEQILGKYENAIATYQQILKKT
ENYVPALKGLGECYLMLARSALDNYLDRKAVDYIEQALAYFTRAVKHRPDVSCLWKLLGD
TCTSVHVISPTKVNVQVLGSLLGKNATKQMLKKNDLLVLGGRCYGRALKLMPLPSIWCDL
GINYYRQAEYLTAVGTDMNEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINIVAWTNLGVLYLATGNIEQAHEAFKVAQSLEPSYLLCWIGQA
LIAETVGSYDTMDLFRHTTELNMHTEGAKGYAHWVCSTLQDKANRNTELYLYNIVQMNAI
PAAQVVLSKYTERNPDDPSAFTMFGFLNEYLHLKQQATCAYERAASLLKNSEDTEKYNTA
VQNYGRSLCALGRCDEAIEVYTSIPLTEFDGIVGLALAYFKKGLLEESIKAYEKALSVAE
SEEDKAHILTALAIIEYKLNKVDAAKTLLFKCSLKEPSTESLKALCTLGLVKQDATLATA
ALKELLKHEKGNGGIYERCLIASAVYALQGRNVAIQREVSKAIHSYPDNPALWSLLSRLV
PLYASKKPEGGAVAGGVAHTLDVNCGKVWLNIAVNQLVAGCHMLEDKKNNPLKNIQKAIH
VCPDNPAAWAVLMAACHAENTVVCLNNTEPKRTGLEMTLVSTVSAKTGESNLPHNYVHTL
EDWCLCQAITSLEETGKLSEAEALCNKGLKSCPEHPTLFLLLRQVQCKQLLQTHKELPDN
IVEELRKTVMSSSSSAAAWQWLAKVYQSQRMMTGAEMCYRKSLQLASQQGSWNGKLSSLL
RLAMLALEICMANVSNEHWPSLVQEATTEALKLSPCPLAALLQALLQYNRKMGARETRRM
LERIVYQPANPKTIVSVARWYLLQHLYAKDDCELIDVLIENAKANGDVRALELNEKLSAS
A
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaagaagtgaaggcagccttaaaaagtgctagagatgccataagaaataaa
gagtataaggaggcattaaaacattgcaaggcagtcttgaagcaagaaaagaataactac
aatgcttgggtattcattggcctggcagctgctgagttagagcagcctgatcaggccaaa
ggagcatataagaaggctattgaacttgaaccaaaccagttgctggcatggcagggatta
gcaaatttatatgagaaacccaaccaaatagatgtcaaaggagacttagcacatgtttac
caaaaactcttggaactctatgaaagtggtgacaagcagaaatggtgtgatgtatgtaac
aagcttgtggagctatattatcaagaaaagaaatatttagaggtggctgaaacttggcag
aaactaatacagatgaaacaggaggaaggtgcagaaaaggcagagcttcatcagctttgg
aagaagatgatccagttactgaaggacagtacaaggaaccaggataataagactgggcag
ttgcttttgaccgcatttgaacatgcgctgaactctgctgacgtggttcctggtgaagac
caccaaaatctttacaaagacttcatacagtgcttgtcaaaatttcctcatgaagtagct
aggttggaaaaggcctgtcatgatatgatggctttgtaccctaccatgagttatcctttg
gaagtactttgcttgcactttattcattcaggtactttgtcggaaaaggccctgcactgt
ttctctcggcttttggagatggatgcgagcagtggtccaggcatcattggttttggtata
aaatgcctcaaagaaaagaaatacaaggaggctgttaagagtcttactgaaggtttgcag
aagactaaccagtgtccagcagcatggcattatttagcagaggcacagatgaagattcac
gaacacaggaatgctgtcctgtcctgcaatcaagctcttgaggctcttggaactcctgag
ggtcctaatctccggtggaagaaccttgcccttcagttgaaagcagagactttgattaaa
atagctgatgctgatgctgcagaagaagccattaaagcacttgagcagaccgtagatgca
agcagtgacccagtggtttcagctctcaggggtcaggcttatctaaacaaaggtttaatg
gatcaggcttcaaagatttcacaagagcttctgttgtcccaccccgatctggctgaagcc
catgctttagagggtttcatccattattcccaaaagaactatgaacaggcagaaaaaagt
tttctaagtgctattgaaaaaaaggctggaactgcagagtatcatcagtacctgggactc
acatactggttcatgagtgatgagacaaaaaaagacaaaggaaaagcactcactcagttt
ttgaaggcggcaaaatttgacagctacttgggaagtgccttttgttacctaggtaactac
tacagagacattgctggagacaaaagtagagctcgtggttgctataaaaaggcttttgaa
ctggatgagacggatgaagaatctggaacagcagctgtaaacttaagcatggaacttgga
gacatggacactgctctgtcaatcctgaatgaagtaactggaaaagcaagacctggtaca
gcaaaatgggcctggcttcatcgtggactttattacctgagaactggtcagccgtcacaa
gcagtggctgatttgcaggcagctctcagggctgatccaaaggattccaactgctgggag
tctctaggggaggcttacttgaacagaggtagctactcaacagctctgaaatccttcagg
aaagcaagtgagctgaacccaggacttgtgtacagcatttacagagctgcagcgcttgag
cagattctaggcaaatatgaaaatgctatagctacctatcaacaaattttaaagaagaca
gaaaactatgtgcctgcactgaaaggacttggtgagtgttacctcatgctggcaagatca
gcccttgataactatttggataggaaggctgtggattacatagagcaggcccttgcatat
tttacaagggcagtaaagcaccgtcctgatgtatcttgcctctggaaactgttgggagat
acctgtactagtgtgcatgttatttcgccaaccaaagtgaatgttcaagtactaggatcc
cttctgggtaaaaatgcaaccaaacagatgctgaagaaaaacgatcttctcgtactgggg
ggaaggtgttatggcagagctttaaaactgatgcctttgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcggagtacctcacagcagtgggcactgacatgaatgag
atcagtgaactgctagagaagtctttgcagtgtctcaaaaaagctgtgagacttgacagc
aaaaatcatctttattggaatgcacttggtgtagttgcttcttgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaattaatattgtt
gcctggaccaacttgggggttttgtatctggcaactggaaacattgagcaagctcatgaa
gccttcaaggtagcccagtctctggagccgtcttacttgttgtgttggattggacaggca
cttattgcagagaccgtaggcagctatgatactatggatctcttcaggcacacgactgaa
ctcaatatgcatactgagggagcaaaaggctatgcccactgggtatgttcaacgctgcag
gataaagccaacagaaacactgaactgtatctgtacaacattgttcaaatgaatgctata
ccagcagcccaagtggtcttgagcaaatatacagaaagaaatccagatgatccttctgct
ttcacaatgtttgggtttttgaatgagtatctacatctaaaacagcaggcaacctgtgcc
tatgagagggcagcttcactgctgaaaaactcagaggatactgagaaatacaacacagca
gtgcaaaactacggcaggtcactgtgtgctcttgggcggtgtgatgaggccattgaagtt
tacacatcaatacccctaactgagtttgatggcattgtggggctagcgttagcttacttc
aagaaaggactattagaagaaagtatcaaagcctatgaaaaagccttgtctgttgctgag
tctgaagaagataaagcacatatcctgactgccttggcaataatagaatataaactgaac
aaagtggatgctgcaaagacactgctgtttaaatgctcattaaaggaacctagtacggaa
agtctgaaggctttgtgcacactgggattggtgaagcaggatgcaacacttgcaacagca
gccctaaaagaattactgaagcatgaaaaagggaatggtgggatttatgagagatgcctt
attgcatctgctgtttatgcattacaaggtagaaatgtggcaatccagagggaagtctcc
aaagcaatacacagttaccctgataatcctgccctttggtctcttctgtctcgactagtt
ccactgtatgcatcaaaaaagccagaaggaggagctgtggcaggaggtgttgcacataca
cttgatgtaaactgtggaaaggtttggctgaatattgcagttaatcagctggtagcagga
tgtcacatgttagaagataagaaaaacaatcctctgaaaaatattcagaaggccatccat
gtctgtccagataatcctgctgcttgggcagtgctaatggcagcctgtcatgctgaaaac
actgttgtctgtctaaacaacactgaaccgaaacgaacaggtctagagatgacacttgtg
tctacagtttcagccaaaactggagaaagtaaccttccgcataattatgtccatactctt
gaagactggtgtctgtgtcaagctattaccagtctagaggagactggtaaactgtcagaa
gctgaagctctttgtaacaagggtctaaaaagctgccctgagcacccaactctgtttttg
cttttgagacaagttcagtgcaagcagctgttgcagactcacaaagaacttccagataac
atcgtggaggaacttcgtaagacagtcatgtccagttcatcctcagctgcagcatggcaa
tggctggcaaaagtatatcagtctcagagaatgatgacaggagcagagatgtgctacaga
aagagtctgcagttggcatcccagcagggcagctggaatgggaagttatccagtctgctc
aggctagctatgctcgcactggaaatctgcatggctaatgtctcaaatgaacattggccc
tcattggttcaggaggcaacaactgaagctttgaaactttctccttgccccttggcagct
ctgcttcaagcactgctacagtataatcgcaaaatgggagcaagggagactcggcgaatg
ttggagagaatagtttatcaaccagcgaatcccaaaaccattgtgtcggtggcacgctgg
tatctcctgcaacatctgtatgccaaagatgattgtgaactaatagatgtacttatagaa
aatgccaaagctaatggagatgttagagctctggaactaaatgagaaattgtcagcaagt
gcatag
DBGET
integrated database retrieval system
