Corvus brachyrhynchos (American crow): 103616419
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Entry
103616419 CDS
T08418
Symbol
IKBKAP
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbrc03016
]
103616419 (IKBKAP)
Transfer RNA biogenesis [BR:
cbrc03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
103616419 (IKBKAP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
Herpes_UL37_2
MlrA_C
Motif
Other DBs
NCBI-GeneID:
103616419
NCBI-ProteinID:
XP_017590845
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MSWSPDQELVLLATGQQTLIMMTRDFEPITEKQIHQDEFGEGKFIALGWGKKETQFHGSE
GKQAAHRKQTEVLPTPAWDDGRPRVTWRGDGQFVAVSAVCPETGARKVRVWSRELVLQST
SEPISGLEQALSWKPSGNLIASTQEKPNRHDVVFLEKNGLLHGEFTLPFQKGQVKVNEML
WNADSTILAIWLEDLKVENSNTNTYVQLWTTGNYHWYLKQSLHFGSLEENQLVSLLWDRE
NLYKLHILCQGWHYLFYDWHWTTDHGLGENSQHMANVAVIDGDKVLVTAFQHAVVPPPMC
TYELQLQQAVNQVAFHTDPKHSGDMAVLDADNRISVYRYGQSTVNDPTVNFGAVGGNGFR
AAVETPYLDKTYRVDVSSGSNEVMNPLGLRFLTWLPDDSFLVVGQSQHAAQSVLHHLTAV
PHVAGAEEECLNLRLSVPVDGEVISLYSSPVTKTVALQLTDRRILKYLWEASTPVLEPWQ
SSSGSAVQFPYRCVQISITRISDEEVILGLTDRCRFFVNDIEVASNITSFATYNEFLLVT
TNSHTCQCFCLKNLSVKALQAGLSSAAAPNSETLRKVERGSRIVTVVPQDTKVVLQMPRG
NLETIHHRALVLAQIRKWLDRLMFREAFQCMRKLRINLNLLYDHNPKVFLENTETFIRQI
DSVNYINLFFTELKEEDFTKSMYPSLNGSSSTHPRQHPDQKKVNLICDVMRDAMEHIDPQ
KYCLSILTAHVKKSPPELEIALQKVHDLRAGSTAGGVTDHMPLYLVAESVTPDVQAVSAE
EALKYLLFLVDVNELYDYSLGTYDFDLVVMVAEKSQKDPKEYLPFLNALQKMETNYQRYT
IDRHLKRYTKALGHLSKCGPEHFSEFLNLVKDQNLYSEALKLYPSSTQEYKNISDAYGEY
LIQKQLYEQAALILARAGIFAKALGAFQSSGSWQQALCMAAGLGYTKDKLSSLARSMAGK
LVEQRKHAEAAILLEQYTQDYEEAVLLLLEGALWEEALRLIHKYDRLDILETNLKPAILE
AQKSQLIFLDSQKTAFLRHKSRLQVVRELKEKACESLQDYEVPNCPELELFSETSSVVTA
SDMNSKYSHSNSRISARSSKNRRKAERKRYSLKEGSPFEDIALLEVLGESVRAVETVKGE
IHILLKQLVLFGYDEQAGELQQVLEEVLQLMETSVPEIWTPDLQQSSVSLVLGPNSTANS
IMAAYQQKRMVPPAVQDPEVLTPPKFSKNLQWKLHLLQ
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgagctggagtcctgaccaagagcttgttttgcttgcaacaggtcagcagacactcatc
atgatgacaagggattttgaaccaattacggagaagcaaatccaccaagatgagtttgga
gaaggaaagtttattgctcttggctggggtaaaaaggagacgcagttccatggatcagaa
gggaaacaggcagcacatcgcaaacagacggaagtgttacctacaccagcctgggatgat
ggcaggcctcgggtgacatggagaggagatgggcagttcgttgcagtgagtgctgtctgt
ccagagacaggtgcccggaaggtccgggtgtggagcagagagcttgtgctgcagtcaaca
agtgagcctatctccggattagaacaagcactgtcctggaagccttcaggaaacctgata
gcatctacacaggaaaaacccaacagacatgatgtggtttttttggaaaagaatggtctt
cttcatggagagttcaccctccctttccagaaagggcaggtcaaagttaatgaaatgctt
tggaatgcagattctacaatcctggctatatggctggaagacctgaaggtggaaaactcc
aacacaaacacttacgttcagctatggaccacagggaactatcactggtacctgaagcaa
agtctacactttggtagcttggaggaaaatcagttggtgtcactgctctgggaccgagag
aacctgtataaactacatatactctgccagggctggcattacctcttctatgactggcat
tggaccacagaccatgggctgggggagaacagtcaacatatggcaaatgtggctgttata
gatggagacaaagtgcttgtcacagcattccagcatgctgtggtgcctccacccatgtgt
acctatgagctccagctccaacaggcagttaatcaagttgcatttcacacagatcccaaa
catagtggggatatggctgtcctggatgctgacaacaggatctctgtatacagatacgga
cagagtacagtaaatgaccctactgtcaattttggagctgtgggaggaaatgggtttaga
gcagctgtggaaacaccatacctggataaaacctacagagttgatgtgagcagtggcagc
aatgaagtgatgaatcctctggggctccgatttctcacctggctgccagatgacagcttc
ctggttgttggtcaaagtcagcatgctgctcagtctgtccttcaccatctgactgcagtg
cctcatgtggctggagctgaagaagagtgcctgaatttacgcttgtcagtgcctgtagat
ggagaagtgatcagcctgtacagcagcccagtgaccaaaactgtagctctgcagctgact
gatagacggatcctaaaatacctgtgggaggcttctactccagtccttgagccctggcag
agcagcagtggctctgctgttcagttcccctaccgttgtgtgcagatttccatcacgagg
atcagtgatgaagaggtgatcttgggcctcacagatcgatgccggttttttgttaatgat
attgaggttgcttctaacatcacatcattcgcaacatacaacgagtttttgttggtgaca
accaactcccacacctgtcagtgcttctgcttgaagaacttatcagtgaaagccctccag
gctggcctgagcagtgctgctgcacccaacagtgagaccctgcgcaaggtggagcgaggc
tcacgtatcgtcaccgttgttccccaggacacaaaggtggtgctgcagatgccaagagga
aatttggagaccattcatcaccgtgctctggttcttgcccagattcggaagtggctggac
aggcttatgttcagggaagcttttcagtgtatgaggaagctgcgaatcaacctaaatctt
ctctatgaccacaatcccaaggtatttctggaaaacacagaaacctttatcaggcagata
gattctgtaaattacatcaacttgtttttcacagaactgaaagaagaagatttcacaaag
agtatgtacccatctctgaatggtagcagcagtacccatccacgccagcatcctgatcag
aaaaaagtaaacctcatatgtgacgtgatgagagatgccatggaacacattgaccctcaa
aagtactgcctatcgatactgacagcacatgtaaaaaagagtcctccagaactggaaatt
gctctccagaaggtccatgatcttcgagcaggttccactgctggtggtgtaacagaccat
atgccactttaccttgttgcagaaagcgttacgccagatgtccaagctgtgagtgcagaa
gaagcactgaagtacctgcttttccttgtggatgtcaatgaattgtatgattattccttg
gggacgtacgactttgatttagtcgtcatggtggcagagaagtctcaaaaggacccaaag
gaatacttgcccttcttaaatgccctccagaaaatggaaaccaattatcagcgatacaca
atagacagacacttgaagagatacacaaaagctcttggccacctcagcaaatgtggtcct
gaacacttctctgaatttctgaacttggtgaaggatcagaatctatattctgaggccttg
aaactgtacccttctagcactcaggagtacaagaatatcagtgatgcatatggggagtac
ttgattcagaagcagctgtatgaacaggctgcattgatacttgctcgtgctggaatcttt
gcaaaagcacttggtgcttttcagagcagtggcagctggcagcaagccctgtgcatggca
gcagggcttggctacacaaaggataagctgtccagcctggcacggagcatggcaggaaaa
ctggttgaacagagaaagcatgcagaggcagccatactcctggagcagtacactcaggac
tatgaggaggctgttctcctgctcttagaaggggctctttgggaagaggctttaagactg
attcacaagtatgatagactggatatcttggagaccaacttgaaacctgctattttggaa
gctcagaaaagccagctgatcttcctagattcccagaaaacagcatttcttcgccataag
agtcgcctgcaagtggtccgagagctgaaggagaaggcctgtgagagcctgcaggattat
gaagtgccaaattgcccagaattggagcttttctctgaaaccagcagtgttgtgacagcc
agtgacatgaacagcaaatattcacacagcaattcaagaatatcggcgcgatcctcaaag
aaccgacgcaaggcggagcgtaagagatacagcctgaaggaggggagtccttttgaggat
attgcccttctggaagtcctgggagagagtgttcgtgctgttgagactgtgaaaggagag
atacacatccttctgaagcagcttgtgctctttggttatgatgagcaagctggggaactg
cagcaagtcctggaagaggttttgcagttgatggagacctcagtcccagaaatctggact
ccagacctgcaacagagctctgtcagcctggtcctgggacccaattcaactgcaaacagc
attatggctgcgtatcagcagaagaggatggtgcctcctgctgtacaagatccagaagta
ctgactccaccaaagttcagtaaaaatctacagtggaaactgcatcttctccagtaa
DBGET
integrated database retrieval system
