Corvus brachyrhynchos (American crow): 103616437
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Entry
103616437 CDS
T08418
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
cbrc
Corvus brachyrhynchos (American crow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
VWA_2
DUF4998
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
103616437
NCBI-ProteinID:
XP_017589611
LinkDB
All DBs
Position
Unknown
AA seq
1473 aa
AA seq
DB search
MLIHTWFFLACLPVMSHVWGRVGQGSGRLKLTVLSEDRLQMKWKETEGNISGYKVRVKPM
AGDSEQEVMLKTKTPKATVGGLSPTKEYTLQVYVLNGSQEALFAKRKFVIEELKNASQTR
NNRRNAGAASGKNLTSSGSSAAEHSWVAEATPPPLNTALSQTAKDRAEKKRQKGIQPKSS
GETTRNQPSVEASVTETTSITPKSSPHTPENAERESPGKEKPPKDSLRRGSQFQCDTPAM
TDIVLLVDGSWSIGRNNFKLIKEFLSNLISPFSIAEDKIRVGLSQYSSDPRTEWDLSAYS
TREQVLEAVRNLRYKGGNTFTGLALTHVLEQNLKPDAGARLEAEKLVILLTDGKSQDDAN
LAAQTLKNLGIEIFAIGVKNADEAELRQVASEPLELTVYNVLDFPLLSSLVSKLTRVLCT
RIKERSHKETTGSAVKDNPANTGPQISPTDLKISAVTSKSMHLAWSPPLRPPKKYRVVYY
PSKGGTPKEVVLEGAESSLQLSNLTSHTEYLVSVIPVYDTAVGDGLRGVTSTLPLSSPRS
LRVSELSHNSLRLSWKAAQGATHYLVLCSAAPDGAEDYTTEVKVTQPEVLLEGLSPSTGY
SVAVYAMYGEDASDPASIQETTLALSPPRYLSFSELSHASVRVSWEAAAPAVRAHHVTYV
SSRGGNAGEVEVPGTATSTVLRPLSSLTQYFISVRSTYDEGDSFPITGNVTTLKVPAPRA
LKVTELSGSSLRLQWEAVAASDVVVYQIKWSTASGEKPQELSLAGNVATAVLPGLQKNTD
YKISIWAYYKDGARSDTVSVHHRTNSRSPPTNLFINSETPSSLQVHWTPPDGRVQHYKIT
YSPVSDAAAQQTIMASGKSSSVTLQSLLPDRAYKVTISAIHYTGESESTSTTGRTAPVLS
KFPSIRGFAPPKTEACPTITSTEGSIRGFDLMEAFGLVEKEYSSIKGVAMEPFIFSGSRT
FTLFRDIQLTQRTSDVHLFAIPPEHTIIILLRLLPDTPKEPFAVWQVTDEDFQPLLGVNL
DPSKKSLTYFNHDYKADLQEVSFDQQEVKKIFYGSFHKVHVAVSHFKVKLYVDCKKIAEK
PINTLGSISTAGFIMLGKVTRTRGPRSGSVPFQLQSLKILCSSVGAEQDRCCDLPAVRDE
DTCPTLAPACSCTSGRPGLPGPPGPPGSPGRRGPQGEQGEPGPKGEPGPPGQVGPAGPSG
QQGSPGSQGITVQGPVGPPGIKGEKGDTGIPGMQXIPGVQGAPGRDGLQGAKGVRGLEGT
AGPPGPPGPRGFQGATGTRGSSGEKGPPGDVGPTGLPGPKGERGEKGEPQSLATIYQLVS
QACERMIQTHVLKFDSFIHEHARKPVPIWEERLKPGEPGPPGPPGPPGSSGEKGENGIPG
QPGKDGYPGERGAPGPKGEKGMSGASEEGSQGPRGRTGPPGEVVQGKPGPKGYPGNAGPP
GFPGARGQPGQPGYPGGCDISGCYEADRRGFVP
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgctgattcacacttggttcttccttgcctgcctacctgtgatgagccatgtctgggga
cgagtgggccaagggtcaggccggctgaaactcactgtcctctcagaagacaggctccag
atgaagtggaaagagactgaagggaacatcagtggctacaaagttcgggtaaagcccatg
gcaggggactcggagcaagaagtcatgctgaaaaccaagactcccaaagccacggtggga
gggctgagccccaccaaggaatacaccctgcaggtctatgtgctcaacggctcccaggaa
gccctgtttgccaagaggaaatttgtgatagaggaactcaaaaatgcatcccagactaga
aataaccgaaggaatgcaggagctgcatcaggaaagaacctcacctcctcggggagctcg
gcagctgagcacagttgggtggcagaggccaccccaccacccctgaacactgctctgtcc
cagacagcaaaggacagagctgaaaagaaaaggcagaaggggattcagccaaagagctcc
ggagaaacgacaagaaaccagccgagtgtggaggccagcgtgacagaaacaacatcaata
accccaaaatcatccccgcatactcctgaaaacgcagagcgagagtctccaggaaaagaa
aaacccccaaaggattcactgaggcgaggctcccagtttcagtgtgacacacctgcaatg
actgatatcgtcctgcttgtggatgggtcctggagcatcggacgcaacaatttcaagctc
attaaggagttcctgagcaatctgatttccccattcagtattgcagaagacaagataaga
gtagggctgtcccagtacagcagtgacccccgcacggagtgggatctgagcgcttactcc
acgagggaacaggtgctggaggccgtgaggaatttgcggtacaagggtggcaacaccttt
acaggtctagcactgacccacgtcctggagcagaatctgaaaccagatgctggtgcccgg
ctggaggctgagaagttggtaatcctcctgactgatgggaaatcccaggatgatgccaac
ctggctgctcagaccttgaaaaacctgggcatagagatatttgccatcggggtgaagaac
gcggacgaggcggagctgaggcaagtggcctcggagccgctggagctcaccgtgtacaac
gtgctggacttccccctgctcagctccctggtcagcaaactcacacgggtcctgtgcacc
aggatcaaggagaggagccacaaggaaaccacaggcagcgctgtgaaagataaccctgcc
aacacgggtccccagatcagcccaactgacctgaaaatatctgctgtgacctccaagagc
atgcacttggcctggagccctcctctgagaccaccaaagaaataccgggttgtgtattat
ccatccaagggtgggacacccaaagaggtggttttagagggagcagagtcctctctgcag
ctgtccaacctgacctcgcacacggagtacctggtgtcggtgatccctgtgtacgacacc
gcggtgggggacgggctgagaggcgtcacctccacactgcctttgtcttcccctcgttcc
ctgcgcgtctctgagctgagccacaacagtctgaggctgagctggaaagcagcccaggga
gccacgcactacctggtgctctgctctgcagcccctgatggagcagaggactatacaaca
gaggtgaaggtgacccagcccgaggtgctgctggaggggctgtcccccagcactgggtac
tctgtggcagtgtatgccatgtatggggaagatgccagtgatccagccagcatccaggaa
accaccttggccttgagtcctcccaggtacctgagcttctccgagctcagccacgcttcc
gtgcgggtcagctgggaggccgcggccccggccgtgcgggctcaccacgtcacctatgtc
tctagcagagggggcaacgctggagaggtggaagttcctggcactgcaacatccactgtc
ctgagacctctgtcctccctcacccaatacttcatcagtgtcagatctacatacgatgaa
ggggactcctttccaattactggcaatgtcaccaccttgaaggtccctgctcctcgcgct
ctgaaggtcaccgagctctccgggagcagcctccgcctgcagtgggaagctgtcgctgcc
tcggatgtggttgtctatcagatcaagtggagcacagccagtggagagaagcctcaggag
ctctccctcgctggaaatgtggcgacagccgtcctgccaggcctgcagaagaacactgac
tacaaaatatccatctgggcctactacaaagatggtgctcgaagtgacaccgtttctgtt
caccacaggaccaattcccggagcccacccaccaacctcttcatcaactccgagaccccc
agcagcctccaggtgcactggacccctcctgatggccgtgttcagcactacaaaatcacc
tacagccctgtttctgatgctgctgcccagcaaactatcatggcttctggcaagagcagc
agtgtgaccctgcagtccctgctgcctgatcgagcctacaaggtgaccatttctgccatc
cactacacaggagagagcgagagcacatccacgacgggacggacagctccggtgttgtct
aaattcccttccatccgaggatttgccccacctaaaacagaggcctgtcccaccatcacc
tccacggaaggttccataagaggatttgatttgatggaagcttttggcttggtagagaag
gaatattcctccattaaaggcgtagccatggagccctttatattcagtggttcccgcacc
ttcaccctgttcagagacattcagctcacccagaggaccagtgatgtccacctgtttgcc
atcccacccgagcacaccatcatcatcctcctgcgcctcctgcccgacacccccaaggag
ccctttgccgtgtggcaggtcacagacgaggacttccagcctctcctgggtgttaacctt
gaccccagtaagaaatccttgacctatttcaatcatgactacaaggctgatttacaggaa
gtctcctttgaccagcaggaagtgaagaagatattctatgggagctttcataaggtgcac
gtggccgtgagccactttaaggtcaagctctatgtggactgcaagaaaatagcagagaaa
cccatcaacaccctcggcagcatctccaccgccggcttcatcatgctgggaaaagtgacc
aggaccagagggccccgcagcggctccgtgccgttccagctgcagtctctgaagatcttg
tgcagcagtgtaggggcagagcaggacaggtgctgtgatctccctgcagtgagggatgag
gacacctgccctaccttggctcctgcctgttcttgcacttctgggcgcccgggcttgcca
ggacccccagggccccctggcagccctgggaggagaggacctcagggggagcagggagag
ccaggacccaagggtgaaccaggcccacctggacaagtaggaccagcgggtcccagtggc
caacaaggctctccaggttcccaaggaatcacagttcagggccctgtgggaccaccagga
attaaaggagagaaaggagacactggaatccctggcatgcaggnnattcctggtgtgcag
ggagctccaggcagggatggacttcaaggcgcaaagggtgtgaggggactagaaggcaca
gctggacctccaggacctcctggaccaaggggtttccaaggagcaacaggcacccgaggc
agcagtggcgagaagggacctccgggtgatgttgggccaacaggactgccaggtccaaaa
ggagaaagaggagagaaaggggagccacagtctttggccacaatttaccagctcgttagc
caggcttgtgagcggatgattcagactcatgtgttgaagtttgattcattcatacatgaa
catgcaaggaaaccagttcccatttgggaggaaaggttaaaaccaggagaaccaggacca
ccaggtcctccaggcccacctgggagcagtggagaaaaaggagaaaatggcatccctgga
cagccaggcaaagatgggtatccaggagagagaggtgccccagggcccaaaggagagaaa
gggatgtctggagccagtgaggaagggagccaaggacccagaggcagaacaggccctcca
ggagaagttgtgcagggaaaaccaggtccgaagggttaccctgggaatgccggtcctcca
ggtttccctggtgccagagggcagcctgggcagcctgggtatccagggggctgtgatatc
tctggatgttatgaggccgacagaagaggttttgtcccctga
DBGET
integrated database retrieval system