Corvus brachyrhynchos (American crow): 103616571
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Entry
103616571 CDS
T08418
Symbol
DYNC1I2
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic dynein 1 intermediate chain 2
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04145
Phagosome
cbrc04814
Motor proteins
cbrc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103616571 (DYNC1I2)
09142 Cell motility
04814 Motor proteins
103616571 (DYNC1I2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103616571 (DYNC1I2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbrc03036
]
103616571 (DYNC1I2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cbrc04812
]
103616571 (DYNC1I2)
Chromosome and associated proteins [BR:
cbrc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
103616571 (DYNC1I2)
Cytoskeleton proteins [BR:
cbrc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
103616571 (DYNC1I2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Dynein_IC2
WD40
WDR55
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_DCAF4
WD40_RFWD3
Nbas_N
Beta-prop_WDR11_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
103616571
NCBI-ProteinID:
XP_017591231
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEVLPVQEESDLEKKRREAE
ALLQSMGLTPESPVVPPPTSPSSKSVSTPSEAGSQDSGDGAVGSRTLHWDTDPSVLQLHS
DSDLGRGPVKLGMAKITQVDFPPREIVTYTKETQTPVMTQPKEDEEEEDDVVAPKPLVEP
EEEKTLKKEEEEEAAPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSG
RDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEP
DGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTP
VQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDSMELVHKQS
KAVAGTCMSFPLXDVNKXXXXSEEGSVYTACRHGSKAGISEMFEGHQGPITGINCHAAVG
PVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGMGRL
DLWNLNNDTEVPTASITVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAIPRGD
EWTRFGRTLAEINANRADAEEEAATRIPA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgagctgaaggcggagttggagcgcaagaagcagcgattagctcaa
atcagagaggagaagaagagaaaggaggaagaaagaaagaaaaaagaaactgaccaaaag
aaagaagttcttccagtacaggaagaatctgatcttgaaaagaagagaagagaagctgaa
gcgttgcttcagagcatggggttgacacctgagtctcctgttgtccctcctcctacctct
ccgtcttccaaatctgtgagtacgccaagcgaggctgggagccaggactccggggatggt
gctgttggatctaggacgctgcattgggatactgatccatcagttcttcagctccactct
gattccgatctgggacgtggacctgttaaacttggaatggccaaaattacacaagttgac
tttcctcctcgagaaattgttacctacacaaaggagacgcaaacacctgttatgactcag
cccaaggaagatgaggaagaggaggatgatgtggttgcaccaaaaccgttagttgaacct
gaggaagaaaaaacattaaaaaaagaggaggaagaagaagctgcccctcatgaactcaca
gaggaggaaaagcaacaaattttgcattctgaagaatttttaagtttctttgaccactcc
acaaggattgttgaaagagccctttctgagcaaatcaacattttctttgactacagtgga
agagacttagaggacaaagaaggagagattcaagcaggagcaaaactgtccttaaatagg
cagttttttgatgaacgttggtcaaagcatcgtgttgtcagttgtctggactggtcatct
cagtatccagaattacttgtagcctcttacaacaataatgaggatgcgcctcacgagcct
gatggagtggcccttgtatggaatatgaagtacaagaaaactaccccagagtatgtcttt
cactgccagtcagcagtgatgtcagctacatttgcaaaatttcatcccaatctggtggtt
ggtggcacatactcgggccagatagtgctgtgggataatcgcagcaataagagaacccca
gtgcagagaacgccactttcagctgctgctcacacgcacccagtgtactgtgtaaatgtt
gttgggacccagaatgctcataatttgatcagtatctcaactgatgggaaaatatgctct
tggagtctggatatgctttcccaaccacaggatagcatggagctggttcacaaacagtcc
aaggctgtggctggtacctgcatgtctttccctctttgagatgtcaacaaannnnnnnnn
nnnagtgaagaaggctcagtgtacactgcatgccgtcatggcagcaaagctggaatcagt
gagatgtttgaaggacaccagggaccaatcacaggtatcaactgccatgcagcagttgga
cctgtagacttctcacatctttttgtcacctcttcttttgactggacagtaaagctttgg
acaacgaagaataacaaacctctctactcctttgaagacaactcggattatgtttatgat
gtgatgtggtctccaactcaccctgccttgtttgcctgtgttgatgggatgggcagactt
gacctgtggaatctcaacaatgatactgaggtgcccactgcaagcatcactgtggagggc
aatcctgctctgaaccgtgtgagatggacacattcggggagagagattgctgtaggtgat
tcagagggacaaatagttatatatgacgtgggagagcaaatcgccattcctcgcggggat
gagtggactcggtttggccgaacgctggcagaaatcaacgccaacagagctgatgcggaa
gaggaggctgcgacccgcatcccagcataa
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