| Entry |
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| Symbol |
TAF4
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| Name |
(RefSeq) transcription initiation factor TFIID subunit 4
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| KO |
| K03129 | transcription initiation factor TFIID subunit 4 |
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| Organism |
cbrc Corvus brachyrhynchos (American crow)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cbrc00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103616598 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cbrc03021]
103616598 (TAF4)
03036 Chromosome and associated proteins [BR:cbrc03036]
103616598 (TAF4)
Transcription machinery [BR:cbrc03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103616598 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
103616598 (TAF4)
Chromosome and associated proteins [BR:cbrc03036]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103616598 (TAF4)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1009 aa
MGLSAPEITKAGAGGVQGGVINHNTRSQTSALDGATTTSTSTTTAAAGASEVTAAPGTLS
QGKSVVISTMATALSTRNGKIGTTTVQTLNGSNVVMNSHHTGSAAFSGTPVTANPAPAPA
VAPLVNNGPGSVGKGNAVNAVLPSASNTVIQTSFLNTAVSSASSSSPTVISSQPPPSVGT
GAPTVTLVRPPIHTAGPTXXXXXXXTQNGSNTVINSTISVGSFPAVATATVGSGVSLQTS
LVNSQSGSSVPAAPATQVIKSESPKTIVQAVSQQQTLATGGQPSTTGGNMIIGQTMQAGL
SNVAPNPGGIPPAAPGTPTGMAKGTANTVAQSLPRTPTPTTSGIRATLTPTVLAPRLPQP
PQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHAQSQPQNTLTPRPATPTS
APPVQISTVQAPGTPIIARQVTPTTIIKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGSAQ
TTALGTATAVQTGTPQRTVQGTTATSTAATETMENVKKCKNFLSTLIKLASSGKQSSETA
ANVKELVQNLLDGKIEPEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQ
SQQQQPTTQATIATIPSAAAVLLSSSVQRTAGKATATVTSTLQQPVISLTQPTQVGVSKQ
GQSTPLVIQQSQKAGALIRPPQVTLTQTPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKP
AVLPGNKAIATVSTQVAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATN
SELVGTLTRSCKDETFLFPAPLQRRILEIGKKHGITEIHPDVVSYVSHATQQRIQNLVEK
LSETAQQRNISYKDDERYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQ
EDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSA
AVPGSSGVGTTRQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK |
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| NT seq |
3030 nt +upstreamnt +downstreamnt
atgggactgagtgccccagagatcacaaaagcaggggcaggaggagtgcaggggggtgtt
attaatcataacaccaggtcccagacttcagctctggatggagccaccacaacaagcacc
agcaccaccactgcagcagcaggagcatctgaagtcactgctgctccagggaccctcagt
cagggcaaatcggtggttatcagcaccatggcaactgccttgtccaccaggaatggcaag
attgggaccacgacagtgcagactttgaatgggagtaacgtggtgatgaactctcaccac
acaggaagtgctgctttctctgggactcctgtgactgccaaccctgctcctgcacctgct
gttgcccctctcgttaacaatggacctggatctgtggggaaaggaaacgctgttaatgct
gttttgccctcagcttctaacactgtcatccagacttctttccttaatactgctgtgtcc
tctgcatcctcctcctcgcccacagtgatctcctcgcagccaccaccaagtgttggcacc
ggggcgcccacggtaacgctcgtgaggcccccaatccacacagcaggacccacnnnnnnn
nnnnnnnnnnnnnnnactcagaatgggagcaatactgtgatcaattcaaccatcagtgtg
gggagttttcctgctgttgccacagccactgtgggatctggagtttctctccagacgtca
cttgtgaacagccagtctggttcctctgtgccagcagctcctgccacacaggtcatcaaa
tctgagtctcctaaaactatagtccaggcagtatcccaacagcagacactggctactggt
ggccagcccagtactacagggggtaacatgattattgggcaaactatgcaagctgggctc
tctaatgttgctcccaatcctggtgggatacctcctgcagctcctggcacccccacagga
atggctaaaggcactgccaatacagtggcacaaagtctgccaaggactccaacaccaacc
acgagtggaatcagagcaactttgactcctacagttttagcacctcgtttgcctcagcca
cctcagaatccaactaacattcagaattttcagttaccaccaggcatggtcctcgtgcgc
agtgagaacgggcagctgctgatgatcccccagcaagccttggcgcagatgcaggcacag
gcacatgcccagtctcagcctcagaacactctgactcctcgtcctgctacacctaccagt
gcacccccagtgcagatatccacagtgcaggctccaggaacgcccattattgcacgacag
gtgacaccaactactatcatcaagcaagtgtctcaggctcaaacaacagtgcaacccacg
acaacgctacagcgtcccccggttgtgcaacctcagattgttctgggtggttctgcacaa
acaaccgcgttggggacagcaacagctgtacaaactggaactcctcagagaacagtgcaa
gggacaacggccacctccactgctgccacagaaactatggaaaatgtgaagaaatgcaaa
aactttctgtccacattaataaaactggcatcatctggaaagcagtcctcagagactgcg
gctaacgtgaaagaattagtacagaacctgctggatggaaaaattgaaccagaagacttt
accagtaggctgtacagagaacttaattcttcacctcaaccttaccttgtgcctttcctg
aagaggagtttacctgccttgagacagttaacaccagactctgcagctttcattcagcag
agccagcagcagcagccgacgacgcaggcgacgatagccacgatcccgtcggcggcggcc
gtgctgctgagctcctcggtgcagcgcacggcgggcaaggccactgccactgtcaccagt
accctccagcaacccgtcatcagcctcactcagcccacacaagttggtgtcagtaaacaa
gggcagtccacgccactggttatccagcagtctcaaaaagcaggggcattgataaggcct
ccacaagtaacgttgacacagacacccatggtggcattgcggcaaccacacagtcgtatt
atgctcactactcctcaaatccaactgaatcagcttcagacagtacctgtggtaaaacca
gcagtattacctggaaacaaagctattgccactgtttcgacacaagtagctgctgctcag
aagaataaactgaaagaacctgggggaggctcttttagggatgatgatgacattaatgat
gttgcatcaatggctggagtcaacctgtcagaagaaagtgctcggatattggcaacaaac
tctgagctcgtgggcacattaacaaggtcctgtaaagatgaaaccttccttttcccagca
cctttacaaagaaggatattagaaataggtaaaaagcacggaataacagaaatccatcct
gatgtagttagctacgtatcacatgctacacaacaaagaatacaaaacctagtggaaaaa
ctatcagagactgctcaacaaaggaatatttcctacaaggatgatgaaagatatgaacaa
gcaagtgacgttcgggcacagctcaagttctttgaacaacttgatcaaatagaaaagcag
cgtaaagatgaacaagaaagggaaattttaatgcgcgcagcaaagtctcgatctcgacaa
gaagatccagaacagcttaggttgaaacagaaggccaaggagatgcagcagcaagagcta
gcacagatgagacagagggacgccaacctgactgcgttagctgccatcggtcccagaaag
aaaaggaaagtagattcaccaggatctggatcagggacagagggatctggttcgagtgca
gcagtcccaggcagctctggagttggaacaaccagacagtttacgcgacaaaggataacg
cgggtgaacctcagggacctcatattttgtttagaaaatgagcgagagacaagccattca
ctattgctatacaaagcattccttaagtaa |
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