Corvus brachyrhynchos (American crow): 103616598
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Entry
103616598 CDS
T08418
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103616598 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbrc03021
]
103616598 (TAF4)
03036 Chromosome and associated proteins [BR:
cbrc03036
]
103616598 (TAF4)
Transcription machinery [BR:
cbrc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103616598 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
103616598 (TAF4)
Chromosome and associated proteins [BR:
cbrc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103616598 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
103616598
NCBI-ProteinID:
XP_008633032
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MGLSAPEITKAGAGGVQGGVINHNTRSQTSALDGATTTSTSTTTAAAGASEVTAAPGTLS
QGKSVVISTMATALSTRNGKIGTTTVQTLNGSNVVMNSHHTGSAAFSGTPVTANPAPAPA
VAPLVNNGPGSVGKGNAVNAVLPSASNTVIQTSFLNTAVSSASSSSPTVISSQPPPSVGT
GAPTVTLVRPPIHTAGPTXXXXXXXTQNGSNTVINSTISVGSFPAVATATVGSGVSLQTS
LVNSQSGSSVPAAPATQVIKSESPKTIVQAVSQQQTLATGGQPSTTGGNMIIGQTMQAGL
SNVAPNPGGIPPAAPGTPTGMAKGTANTVAQSLPRTPTPTTSGIRATLTPTVLAPRLPQP
PQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHAQSQPQNTLTPRPATPTS
APPVQISTVQAPGTPIIARQVTPTTIIKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGSAQ
TTALGTATAVQTGTPQRTVQGTTATSTAATETMENVKKCKNFLSTLIKLASSGKQSSETA
ANVKELVQNLLDGKIEPEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQ
SQQQQPTTQATIATIPSAAAVLLSSSVQRTAGKATATVTSTLQQPVISLTQPTQVGVSKQ
GQSTPLVIQQSQKAGALIRPPQVTLTQTPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKP
AVLPGNKAIATVSTQVAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATN
SELVGTLTRSCKDETFLFPAPLQRRILEIGKKHGITEIHPDVVSYVSHATQQRIQNLVEK
LSETAQQRNISYKDDERYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQ
EDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSA
AVPGSSGVGTTRQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgggactgagtgccccagagatcacaaaagcaggggcaggaggagtgcaggggggtgtt
attaatcataacaccaggtcccagacttcagctctggatggagccaccacaacaagcacc
agcaccaccactgcagcagcaggagcatctgaagtcactgctgctccagggaccctcagt
cagggcaaatcggtggttatcagcaccatggcaactgccttgtccaccaggaatggcaag
attgggaccacgacagtgcagactttgaatgggagtaacgtggtgatgaactctcaccac
acaggaagtgctgctttctctgggactcctgtgactgccaaccctgctcctgcacctgct
gttgcccctctcgttaacaatggacctggatctgtggggaaaggaaacgctgttaatgct
gttttgccctcagcttctaacactgtcatccagacttctttccttaatactgctgtgtcc
tctgcatcctcctcctcgcccacagtgatctcctcgcagccaccaccaagtgttggcacc
ggggcgcccacggtaacgctcgtgaggcccccaatccacacagcaggacccacnnnnnnn
nnnnnnnnnnnnnnnactcagaatgggagcaatactgtgatcaattcaaccatcagtgtg
gggagttttcctgctgttgccacagccactgtgggatctggagtttctctccagacgtca
cttgtgaacagccagtctggttcctctgtgccagcagctcctgccacacaggtcatcaaa
tctgagtctcctaaaactatagtccaggcagtatcccaacagcagacactggctactggt
ggccagcccagtactacagggggtaacatgattattgggcaaactatgcaagctgggctc
tctaatgttgctcccaatcctggtgggatacctcctgcagctcctggcacccccacagga
atggctaaaggcactgccaatacagtggcacaaagtctgccaaggactccaacaccaacc
acgagtggaatcagagcaactttgactcctacagttttagcacctcgtttgcctcagcca
cctcagaatccaactaacattcagaattttcagttaccaccaggcatggtcctcgtgcgc
agtgagaacgggcagctgctgatgatcccccagcaagccttggcgcagatgcaggcacag
gcacatgcccagtctcagcctcagaacactctgactcctcgtcctgctacacctaccagt
gcacccccagtgcagatatccacagtgcaggctccaggaacgcccattattgcacgacag
gtgacaccaactactatcatcaagcaagtgtctcaggctcaaacaacagtgcaacccacg
acaacgctacagcgtcccccggttgtgcaacctcagattgttctgggtggttctgcacaa
acaaccgcgttggggacagcaacagctgtacaaactggaactcctcagagaacagtgcaa
gggacaacggccacctccactgctgccacagaaactatggaaaatgtgaagaaatgcaaa
aactttctgtccacattaataaaactggcatcatctggaaagcagtcctcagagactgcg
gctaacgtgaaagaattagtacagaacctgctggatggaaaaattgaaccagaagacttt
accagtaggctgtacagagaacttaattcttcacctcaaccttaccttgtgcctttcctg
aagaggagtttacctgccttgagacagttaacaccagactctgcagctttcattcagcag
agccagcagcagcagccgacgacgcaggcgacgatagccacgatcccgtcggcggcggcc
gtgctgctgagctcctcggtgcagcgcacggcgggcaaggccactgccactgtcaccagt
accctccagcaacccgtcatcagcctcactcagcccacacaagttggtgtcagtaaacaa
gggcagtccacgccactggttatccagcagtctcaaaaagcaggggcattgataaggcct
ccacaagtaacgttgacacagacacccatggtggcattgcggcaaccacacagtcgtatt
atgctcactactcctcaaatccaactgaatcagcttcagacagtacctgtggtaaaacca
gcagtattacctggaaacaaagctattgccactgtttcgacacaagtagctgctgctcag
aagaataaactgaaagaacctgggggaggctcttttagggatgatgatgacattaatgat
gttgcatcaatggctggagtcaacctgtcagaagaaagtgctcggatattggcaacaaac
tctgagctcgtgggcacattaacaaggtcctgtaaagatgaaaccttccttttcccagca
cctttacaaagaaggatattagaaataggtaaaaagcacggaataacagaaatccatcct
gatgtagttagctacgtatcacatgctacacaacaaagaatacaaaacctagtggaaaaa
ctatcagagactgctcaacaaaggaatatttcctacaaggatgatgaaagatatgaacaa
gcaagtgacgttcgggcacagctcaagttctttgaacaacttgatcaaatagaaaagcag
cgtaaagatgaacaagaaagggaaattttaatgcgcgcagcaaagtctcgatctcgacaa
gaagatccagaacagcttaggttgaaacagaaggccaaggagatgcagcagcaagagcta
gcacagatgagacagagggacgccaacctgactgcgttagctgccatcggtcccagaaag
aaaaggaaagtagattcaccaggatctggatcagggacagagggatctggttcgagtgca
gcagtcccaggcagctctggagttggaacaaccagacagtttacgcgacaaaggataacg
cgggtgaacctcagggacctcatattttgtttagaaaatgagcgagagacaagccattca
ctattgctatacaaagcattccttaagtaa
DBGET
integrated database retrieval system
