KEGG   Corvus brachyrhynchos (American crow): 103616787
Entry
103616787         CDS       T08418                                 
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
cbrc  Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbrc03032]
    103616787 (RIF1)
DNA replication proteins [BR:cbrc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    103616787 (RIF1)
SSDB
Motif
Pfam: Rif1_N HtaA
Other DBs
NCBI-GeneID: 103616787
NCBI-ProteinID: XP_017591516
LinkDB
Position
Unknown
AA seq 2285 aa
MRLCLRLTGEGGKAFAADVRKHFPQLCKVFKAHISSPNLELSNAALQALGFCTFNSNNTA
ELSATEIQDLLSAVNSVAVKSSDKNTRTRALWVISKQAFPPEIVKKEVSSILSTLETILT
KGEVQSVVVEYEALNVIIRLMEQTPAQMGEEAVRWAKLIIPLVVHSAHKVQLRGATALEM
GMPLLLQKQQEVAAVTEHLMTTKLISELQKLFSTKNETFVLKLWPLFVRLLGKTLHRSGS
FINSLLQLEELGFRSGSPVVKKIAFIAWKSLIDNFALNPDILCSAKRLKLLMQPLSSIHV
RTEALALTKLEVWWYLLMRLGPHLPSNFEQVCIPLIQSTLSVDPAAAFPGTPSRLPSNPS
LGSATPGQKSGPFPFVSPGTPRMALNTSTAGVVLFPSIQLLGIEMLLHFLMGPQVVDFAK
QNKLVLSLEPLQYPLISSPSFFCKHASTLINAVQDGFIAVGKEVPDCLLNVIWKDINGYV
KTAIEAGNKKEKQGSEILTMLLQALKNTVRSNSLPVQKILSLIDITVKELPPKVLGSPAY
QVADMDLLNGTPALFLIQLPFHNNLLECCVTDERFFVILETLVGYVLSGPTSALAFSESV
ICVIDQSGKQVGNKEHLWRMWSIVVNPLTEWINQTNEVNQGDALEHNFSAVYSALLLPVS
HIFPAQGFPQPTLKSLLRTWSDLYRAFARCAALVATAEENLCCEEICAKIISGLEGETPV
MFFMLEGLTHLVSVMVDCINFAPYGTKFQPKTRSPQTPTDWAKKKKEPLGKLASLFKLLL
MLLNSFHEFSSKEAHSESLISVGPSLLAALHTIISHISLPSLIGTTFAIFSKPLAVFYEK
TKLPEVPKVYSNLNSKLEKLLAEILQCLQCHCPGSCDTELLQQLCPVLCVGFQHRNKQIR
HQCAQLWNSTFAKTSSLTYPEELKSVLSQAKKKIPLLLPGFESIEMSEECSGPFSDTMEN
SQLDAKISGMEVKVGQKRDSILAQTSEPKNDGKDKSSNVQATPAKLKLEFSSPKTTSETL
LEEEKSVDFVFIPPETKPRVLTEHQKEVLRSKRVDIPAMYNNLDASQDTTSFSQYTQSQE
DSLEVAPSVENAKEDTANQPQEENAGSEGCQSEESPACNNKGESKNETAEMIPEETSVGE
GLETSAMEAASEEASAGKESTSNISNSEEESKNETAEMIPEETSIGEGLDTSSEEAASQE
ASAGKENTSNVSNSSASSDIISGTPQPVSRRQSFITLEKFGAAENRPFSPAPLNSVLELS
GSAAGAQENTSGSKASAKAEKSGEENKNPPNPEADAGVTAIRRVTRRQSRMELQGNKSKL
LSRSEESLASDSLESSAELCFAGEDVEHVLLSQSQALHSAEADIKKAEDTIAEVEKAQAL
DMDSKENTPPDTTSCSEQAPGDDSQVPQVSPHQKQLRRSSRRRSETVESSSGSQEKEDGL
PKRDRRKEEEKAGQKKLSQGKGDGSQKQKGIPGKTTEITKEGSQPERVAEDWSSKDSPAS
RGLDEDGSRGGRRAEDSPRAEGEAQASLSTAGQKVVERPRYHTRRSSQGLLSSIENSEAD
SSEAKEGSTKKKKHIKVRSRSNSLEGKMKEGQPGSQSLEVSPQGNETKNSLEATKDEPEV
STGAAVTAEPGGLEIQVIPAAAGKAVGSGSSESPGALQDTSLEQNKGDASMESLSSSCVS
DQDGRAAEENQQEEKQTSTGDCAPAANVSGAEPSSLQSPECPSKRSKRVKKIKSCDCCFK
KPKQQVTEFKFMELKKEKTELEEPQTTPVETPVNVSGHSDLEESLALAPCAMSTPLHPPK
EPSTFSMESQGISVDNLQGSSVVVEENPEGSAGETTESIEEIKEPAELKEETEQVLPESA
PGEPRESCLDSRDQGEEPAAAEKEEVNENGQLEEVPQELNADSKPEEKEMKELEGNQEDK
GEAENTAGETCGVADEEVKEEPLETEIKVAENVALENMSVDSPLKVEGDPSVQVTESPTS
LQARCTWSPSASPSTSILKRGVKRNQEDDSLSPANKIRRVSFANPIFQEGLADDIDRRSP
VIRSHSSPSSRSLKTLSNMQHITTPTKGFLSPGSRTLKFKSSKKCLITEMAKESLPCPSE
FVYPALAGCKAPVDVILPQITSNICARGLGQLIRAKNIKTVGDLSTLTALEIKTLPIRSP
KVSNVKRALKGYHEQQVKSRVLEESTVPEDAEKPGNNVEEKSLCGDEEKLAADLVDAATT
NSSEQPPADLLGQIQALAAQLSSEDLHGYSGRQLFEMQEKLAGMASCILRNLQSRWQSPP
HEGPE
NT seq 6858 nt   +upstreamnt  +downstreamnt
atgaggttgtgccttcgcttgactggtgaaggaggcaaagcattcgccgcagatgtcagg
aaacacttccctcaactctgcaaggtgtttaaggcacacatttctagtccaaacttggag
ctcagtaatgcagcattgcaggccttgggattctgcacttttaattcaaataacacagct
gaattatctgccactgaaatccaggacctgctgtcagcagtgaacagcgttgctgtgaaa
tcctcagacaaaaacactcgcactcgggcactttgggtcatctctaagcaggcatttcct
ccagaaattgtgaaaaaggaggtgtccagtatcctctcgaccctggaaacaatcctgact
aaaggagaagttcagtctgttgtggttgaatatgaagcacttaatgttattatacgctta
atggagcaaactccagcccagatgggagaagaggctgtgaggtgggcaaagctgatcatc
cccctggttgtccactcagctcacaaagtgcagttaagaggtgccactgccctggagatg
ggaatgccactgctcctgcagaagcagcaggaggtggcagctgtcaccgagcacctgatg
accacaaaattaatttccgaacttcagaaattgttttctacaaaaaacgagacctttgtg
ttaaaactgtggcccctgtttgtgagattgcttggaaagactctgcatcgcagtggcagc
ttcatcaactccctgctgcagctggaggagctgggattccgcagtggctccccagtggtg
aagaaaattgccttcattgcatggaagagcctcattgataattttgctctaaatccagac
atcctgtgcagtgctaaaaggctgaaactgctgatgcagcccctgagctccatccatgtg
aggacagaggctctggcactgaccaaactggaggtgtggtggtatttactgatgagactg
ggacctcatctgccttcaaactttgaacaggtttgtatcccattaatccaaagcaccctg
agtgtggatcctgctgctgcattcccaggaacgccctcacgcctgccaagcaaccccagc
ttgggctcagcaacccctgggcagaaatcaggtcctttcccgtttgtgagcccaggcacg
cccaggatggccctgaacaccagcacagcaggagtggtgctgttcccttccatccagctc
ctgggaattgaaatgctgctccacttcctcatgggaccacaagttgtggattttgctaag
caaaacaaactggttcttagtttagagcctctccagtacccactgatcagtagcccttct
tttttttgtaagcatgccagcactctgataaatgctgttcaggatggctttattgcagtt
ggaaaagaagttcctgattgtttgctgaatgttatctggaaggacataaatggatatgta
aaaacagcaattgaagcaggaaacaagaaagaaaagcaaggctcagaaatactgaccatg
ttactccaggccttaaaaaacactgtgagatcaaattctcttcctgtgcagaaaatactg
tccctcattgacatcactgtcaaggagttgcctccaaaagtattgggatcaccggcttat
caggttgctgatatggatcttttaaatggaactccagctttgttcttaatccagctgcct
ttccataataacctcttggaatgctgtgtgacagatgagagattctttgtgattctggaa
actctggtgggttatgtcctgtctgggcccacctcggccctggctttcagtgagtctgtg
atctgtgtcattgaccagagtggaaagcaggtggggaacaaggagcacctctggagaatg
tggagtattgttgttaatcctctgactgagtggattaatcagactaacgaggtgaaccag
ggggatgccttggagcacaacttcagtgctgtgtacagtgctttgttgctgccagtatcc
cacatcttccctgctcagggattcccacagccaactttgaaatccttgttgcgcacgtgg
tcagacctgtaccgagcttttgctcgctgtgctgctctagttgcaacagcagaagaaaac
ctgtgctgtgaagaaatttgtgccaaaataatatctgggctagaaggtgaaactccagta
atgtttttcatgctggaaggcctcacccaccttgtgtcagtcatggtggactgcatcaac
tttgcaccctatggaactaaattccagccaaaaactagatctccccagacacccacagat
tgggctaagaagaaaaaggagccccttggcaagcttgcctctctcttcaagctcctgctg
atgctcctgaactctttccatgagttcagctccaaagaagcccattcagaatccctgatt
tctgtggggccttccctcctggctgctctccacaccatcatcagccacatctcgctgcct
tcactcattggcaccacatttgccattttttccaagcccttggcagtgttctatgaaaaa
accaagctccctgaggtacccaaagtctacagcaaccttaacagcaagcttgagaagctg
ctggcagagatcctgcagtgcctgcagtgtcactgcccgggctcctgtgacactgagctc
ctgcagcagctctgccccgtgctctgcgtgggcttccagcacaggaacaaacagatccgc
caccagtgtgcccagctctggaactccacctttgccaagacctcctctctgacttacccc
gaggaattaaaatctgtgttaagccaagccaaaaagaaaatccctctgctgctgcctggt
tttgaaagcattgagatgtctgaggagtgcagtggccccttctctgacacgatggagaat
tcccagctggatgcaaagatcagtggaatggaggtgaaggtgggacagaaacgagattcg
atattggcacagacgagtgaaccaaaaaatgatggcaaagacaagtccagcaacgtgcaa
gcaacacctgcaaagttgaaactagaattttcatctcctaagactacaagtgagacgctt
ctggaagaggagaaatctgttgattttgtgtttattcctcccgaaacaaaaccaagagta
ttgacagaacatcaaaaagaagtgctaaggtcaaagagagttgatattcctgccatgtac
aacaacttggatgcatcacaggacaccacctcattttcccagtacactcagagccaggaa
gattctttggaagtagcaccttcagtagaaaatgccaaagaagacactgcaaaccaacct
caggaggaaaacgcagggagtgaaggatgtcagtcagaggagagcccagcctgcaacaac
aagggggagtccaaaaatgagacagctgagatgatcccagaggaaacatcagttggagag
ggattggagacaagtgctatggaagcagcttccgaggaggcctcagcggggaaggagagc
acctcaaatatcagcaacagcgaggaggagtccaaaaatgagacagctgagatgattcca
gaggaaacatccattggagagggcctagacacaagttctgaggaagcagcttctcaggag
gcctcggcagggaaggagaacacctcaaatgtcagcaacagctcagcttccagcgacatc
atctctggcaccccccagcccgtgagccggcgccagtccttcatcaccctggagaaattc
ggggctgcagagaacaggcccttcagcccagccccactgaactctgtgttagagctctct
gggagtgctgctggggcacaggaaaacaccagtggcagcaaggccagtgctaaagcagag
aaatctggagaggaaaataaaaaccctccaaatcccgaggctgacgcgggggttacggcg
atccgcagggtgacgcgccggcagagcagaatggagctgcaagggaacaaatccaagctc
ctgagcaggtcagaggagtccctggcctctgacagcctggaaagcagtgctgagctgtgc
tttgcaggggaggacgtggagcatgtcctcctgagccagtcccaggctctgcactccgcg
gaagcagacatcaaaaaagccgaggatacaatcgcagaagtggaaaaggcccaggcactg
gacatggactcgaaggaaaacacccccccagataccaccagctgctctgagcaggcccca
ggggatgacagccaggtgccacaggtgtcccctcaccagaagcagctccggcgttcctcc
aggagacgctcagagactgtggagagctcctcagggagccaggagaaggaggatgggctc
ccaaagagagacaggaggaaagaggaggagaaggctgggcagaagaagctgtcacagggt
aaaggtgatggatcccaaaagcagaaaggaattcctgggaaaacaacagaaatcacaaaa
gagggcagccagcctgagagagtggcagaggactggagctccaaggactctcctgcttcc
cggggcctggatgaggatgggagcagaggtggcaggagggcagaggattccccaagggct
gagggggaagctcaggccagcctcagcacagcagggcagaaggtggtggagcgcccacgg
taccacaccaggagatcttcccaaggtttgctctccagcatagaaaactccgaggctgac
agctctgaggccaaggagggcagcacgaagaagaaaaaacacataaaagtgaggagtaga
agcaattctcttgagggtaaaatgaaagagggacagccagggagccagagccttgaggtg
tctccccaagggaatgaaactaagaattcactggaagccactaaagatgaacctgaggtc
agcacaggtgctgcagtgacagctgaaccaggtggcctggaaatccaggtaattcctgca
gctgctggaaaagctgtagggtctggcagctctgagagtcccggtgctctgcaggacacc
agcctggagcaaaacaagggtgatgcttccatggagtcactgagcagctcctgtgtgtct
gaccaggatgggagagcagcagaggaaaaccagcaggaggagaagcaaaccagcacaggg
gactgtgcaccagcagcaaatgtttcaggtgctgagccctcctctctgcaaagccctgag
tgtccaagcaagagaagcaaaagggtgaaaaaaatcaagagctgtgattgctgctttaaa
aagccaaagcagcaggtgactgaattcaagttcatggaattaaaaaaggagaaaactgag
ctggaggagccccagaccaccccagttgagacacctgtgaatgtttctggtcactcagat
ttggaggagagcttggccctggctccttgtgcaatgagcactccattgcaccctcccaag
gaacccagcaccttcagcatggaaagccagggaatttctgtggataacctgcagggcagc
agtgtggtggtggaggagaatccagagggttcagcaggtgaaaccaccgagtccatagag
gaaataaaggaacctgctgagctgaaggaggaaacagaacaggttctgcctgagagtgct
ccaggagagcccagggagagctgcctggactcacgggaccaaggggaagaaccagcagct
gcagaaaaggaagaagtaaatgaaaatggacaactcgaagaggtgccccaggagctgaat
gctgacagcaaacctgaggaaaaagagatgaaggagctagagggaaatcaggaggataaa
ggagaagctgagaacactgcaggagaaacttgtggtgttgcagatgaagaggtgaaggag
gaaccgttggaaactgaaataaaagtggctgaaaacgtggccttggaaaatatgagtgtg
gattcccctctgaaggtggaaggggacccctcagtgcaggtgactgaaagccccaccagc
ctccaggctcgctgcacgtggtccccctcagcctccccatccaccagcattctgaagaga
ggggtcaaaaggaaccaggaggatgactccctgtcacctgctaataagatccgccgagtc
tcctttgcaaatcccatttttcaggagggcctggcagatgacatcgacaggaggagtcct
gtcatcagatcccattcctcaccctcttccagaagtcttaaaaccctctctaacatgcag
cacattaccactccaaccaaaggatttctgtccccaggatctcgtacccttaaatttaag
agctcaaagaagtgtttaatcacagaaatggccaaggaatctctgccatgcccttcggaa
tttgtgtatcctgccttggctggctgcaaagctcccgtggatgtcattttacctcagatc
acatccaacatctgtgccaggggcctggggcagctcatccgagccaagaacatcaagacc
gtgggagacctgagcactctgacagctttggaaatcaaaactctccccatccgctctccc
aaagtctccaatgtcaaaagagctctgaaaggataccacgagcaacaggtgaaatctcga
gtgttggaggaaagcacagtgcctgaagatgctgaaaagcctggaaataatgtggaggag
aaatctctctgtggagatgaggaaaaacttgcagcagatttggtcgacgcagccaccacc
aacagcagcgagcagcccccggcagatctcctggggcagatccaggctctggctgctcag
ctgagctctgaagatctccatggatattctggcaggcagctgtttgagatgcaggagaag
ctggcagggatggcctcgtgcatcctgaggaacctgcagtcccgctggcagtcccctccc
cacgagggccccgagtag

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