Corvus brachyrhynchos (American crow): 103616855
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Entry
103616855 CDS
T08418
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03082
ATP-dependent chromatin remodeling
cbrc03083
Polycomb repressive complex
cbrc04110
Cell cycle
cbrc04330
Notch signaling pathway
cbrc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103616855 (HDAC1)
03083 Polycomb repressive complex
103616855 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
103616855 (HDAC1)
04350 TGF-beta signaling pathway
103616855 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103616855 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbrc03036
]
103616855 (HDAC1)
Enzymes [BR:
cbrc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103616855 (HDAC1)
Chromosome and associated proteins [BR:
cbrc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
103616855 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
103616855 (HDAC1)
BRAF-HDAC complex
103616855 (HDAC1)
REST complex
103616855 (HDAC1)
SHIP complex
103616855 (HDAC1)
MiDAC complex
103616855 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
103616855 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
103616855 (HDAC1)
Chromatin remodeling factors
NuRD complex
103616855 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
RNA_polI_A34
Dehydrin
Motif
Other DBs
NCBI-GeneID:
103616855
NCBI-ProteinID:
XP_008633314
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MINSFLLPGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYH
SDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQ
TDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFY
TTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKV
METFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNV
ARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFE
NLRMLPHAPGVQMQPIPEDAVQEDSGDEEEDDPEKRISIRNSNKRISCDEEFSDSEDEGE
GGRKNVANFKKAKRVKAEEEKEEEEKKEEKEEEKAKEEKAAAAAAVAAAAEPKGVKEETK
ST
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgataaactcctttctgcttccaggtgatgttgggaattattattatggccaagggcat
cccatgaaaccccacaggatccgcatgacccacaacctcctgctcaactacggcctctac
aggaagatggagatctatcgtccccacaaggcgaatgcagaggagatgaccaagtaccac
agcgatgattacatcaaattcctgaggtccatccgccctgacaacatgtctgagtacagc
aagcagatgcaaagatttaatgttggggaggactgccctgtgtttgatgggctcttcgag
ttctgtcagctctctgctggaggctctgttgccagtgctgtgaagctgaacaagcagcag
acagacatcgctgtgaactgggcaggaggcctccaccacgccaagaaatcggaggcttcc
ggcttctgctacgtcaacgacatcgtcctggccatcctggagctcctcaagtaccaccag
cgggtgctgtacattgacatcgacattcaccacggggacggggtggaggaggctttttac
accacagaccgtgtcatgaccgtgtccttccacaagtatggagaatatttcccaggaact
ggggacctgagggacattggggcaggcaaagggaagtactacgctgtcaattacccgctc
cgggacggcatcgacgacgagtcctacgaagccattttcaagcctgtgatctccaaagtg
atggagacgttccagcccagcgccgttgtcctgcagtgcggctccgattccctgtctggg
gacaggctgggctgcttcaacctcaccatcaaaggccatgccaagtgtgtggagtttgtg
aagagctttaacctgcccatgctgatgctgggaggaggggggtacacgatccgcaacgtg
gcccgctgctggacctatgagactgctgtggctttggacactgagattcccaatgaactt
ccatacaacgactactttgagtactttgggcctgacttcaagctccacatcagcccctcc
aacatgaccaaccagaacaccaacgaatacctggagaaaatcaagcagcggctcttcgag
aacctgcgcatgctccctcacgctcccggggtccagatgcagccaattcctgaggatgct
gtccaggaagacagcggggatgaggaggaggatgatcccgagaaacgcatttccatccga
aattccaacaagagaatatcctgtgatgaggaattctccgactccgaggacgagggggaa
ggagggcgcaaaaacgtcgccaacttcaagaaagccaaacgtgtgaaagcagaggaggag
aaggaggaagaggagaagaaagaggagaaggaagaggaaaaagcaaaagaggaaaaagca
gcagcagcagcagcagtggcagcagcagcagaacccaaaggggtgaaggaagagacaaaa
tccacctga
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integrated database retrieval system
