Corvus brachyrhynchos (American crow): 103616976
Help
Entry
103616976 CDS
T08418
Symbol
ZC3H12A
Name
(RefSeq) bifunctional endoribonuclease and deubiquitinase ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrc03019
]
103616976 (ZC3H12A)
Messenger RNA biogenesis [BR:
cbrc03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
103616976 (ZC3H12A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
103616976
NCBI-ProteinID:
XP_008633452
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
FFRKLGYSSEEIRVVLQKLGLGADTNTVLGELVKHGPAERDGPEAPPEPSEAPLVPRGGA
GNKSPAPGPEETESDNLKPIVIDGSNVAMSHGNKEVFSCRGILLAVQWFWDRGHKDITVF
VPSWRKEQPRPDVLITDQYILRDLEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAHESDG
IVVSNDTYRDLQNERPEXXXXXXXXXXXXXYLFFLRFMPPDDPLGRHGPSLDNFLRKKPV
IPEHKKQQCPYGKKCTYGIKCKFYHPERINQPQRSLADELRANARLSPTRSTSAKEEKKG
KRGSQAELLCSVPTESDKSSLQKVSAERKSLAHKAKASDIPLQAKGCVSGSVSPDRYQQP
HMDSLSYISQEHLDSGIGSLENQLSDMWPHRCTSHCDHSHAEQVAVCTCGRQRPVYPHSP
SLEQNGLISYKHGSHKSSSSGASFLQYGPEMSHSGAPHSLSGYGVPVHPGTAGQYSLPSE
FSAALPHSREFWSEPYALPQVRSPGVRDPRAVQRAPGPAYGDSGPWAGSEQFAEERASVH
VKLCGIFHPHLVDAVMSRFPRMLDPQRLAAEILTYKAQNPGM
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
ttcttccgcaagctcggctactcctcggaggagatccgcgtcgtgctgcagaagctgggc
ctgggcgccgacaccaacacggtgctgggggagctggtgaagcacggcccggccgagcgg
gacggccccgaggctccgcccgagcccagcgaggccccgctggtccctcggggcggcgcc
ggcaataagtccccggcgcccggccccgaagaaacggagagcgacaacctgaagcccatc
gtcatcgatggcagcaacgtggccatgagccatgggaataaagaagtgttctcctgccga
ggtatccttctggctgtccagtggttctgggacaggggacacaaggatattacagtcttt
gtgccatcatggaggaaggagcagccccgaccagatgtactcataacagaccagtacatt
ctgcgtgaccttgagaagaagaagatcctggtgttcacgccatcgcggcgggtcgggggc
aagcgtgtggtgtgctatgatgaccggttcattgtgaagctggcgcacgaatccgatggc
atcgttgtgtccaatgacacctaccgggatctgcagaacgagcgtcccgagnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatttgtttttccttaggtttatgcctcca
gatgatcccttagggcgtcatggccccagcctggataacttcctcaggaagaaacctgta
attccagaacacaagaaacagcagtgcccttatgggaaaaaatgcacctacggaattaaa
tgtaagttctaccatcctgaaaggatcaaccagccccagcgctcgttagctgatgaactc
cgtgccaacgcaaggctgtctccaaccagaagtaccagtgccaaggaggagaaaaagggc
aaaaggggttcccaggcagagctcttgtgttctgtgcccacagagagcgacaaaagctct
ttgcagaaggtctctgcagagaggaagagcttggcgcacaaagccaaggccagtgacatt
ccgcttcaggccaaaggctgtgtgtcgggcagtgtctcccctgacaggtaccagcagcct
cacatggactctctgtcttacatctctcaggagcatctcgactcaggcattgggtctctg
gagaaccagctgtctgacatgtggcctcacagatgtaccagtcattgtgaccattcccat
gcggagcaggtggccgtctgcacctgtggtaggcagagacctgtctacccacattctccc
agcttagagcagaatggtctgatctcttacaagcatggctcccataaatcttcttcctct
ggtgctagcttcttgcagtacggccctgagatgtctcactcaggagcaccccactctctc
tcaggctatggagtacctgtgcacccaggtaccgcggggcagtacagcctgcccagtgag
ttcagtgctgccctgccccactctcgggagttctggtccgagccgtacgcactgcctcag
gtgaggtcccccggtgtgcgtgacccccgtgcggtgcagagggccccagggccggcgtac
ggggactcggggccctgggctggctcagagcagtttgctgaggagcgggccagcgtgcat
gtcaagctctgcggcatcttccacccacacctggttgatgctgtgatgagccgcttcccc
cggatgctggacccccagaggttggcagcagagatcctcacctacaaggcccagaaccca
ggtatgtga
DBGET
integrated database retrieval system
