Corvus brachyrhynchos (American crow): 103617126
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Entry
103617126 CDS
T08418
Symbol
SMG7
Name
(RefSeq) LOW QUALITY PROTEIN: protein SMG7
KO
K14409
protein SMG7
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103617126 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrc03019
]
103617126 (SMG7)
Messenger RNA biogenesis [BR:
cbrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
103617126 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
103617126 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
103617126
NCBI-ProteinID:
XP_008633607
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQVQANLSLFLE
AASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSTIVKPQSSSCSYICQHCLV
HLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVK
FPFPAASTNLQKALSKALESRDEVKTRWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKL
EEQFKRLLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQHNYSQDEQLCWTQLLALFM
SFLGVLCKCPLQNDYQEDSGAAYPLPAVKVSMDWLKLRPSVFQEAVVDERRYIWPWLISL
LNSFQPHEEDLSSNNATPLPEEFELQGFLALRPSFRNLDFSKGHQAITGDKEGQQCRIRQ
QRLIFTGKWIADNQPRLIQCENEVGKLLFVTEIPELLLEDPSEAKESLALQETSMAEPLC
ADGSPGLKSVLSSGRSLNNSCDAGEKPMVTFKENIKPREMNREQGRIYPPKDLARERRDF
SKGIVANKNDGKKENNKRKNETKKCGLDKMQEAGKQNVAVQVKSQTEMRKTPVSEARKTP
VTQTPSQASSSQFIPIHHPGAFPPLPSRPGFPPPTYVVPPPVAFSMSTGYTFPGGVSVPG
TFLQPTAHSPAGNQVQGGKQSHIPYSQQRPSGPGPMTQGPQQTPPPSQQPLSSLPAQATA
QSTSQLQVQALAQQQQHQSPTKAVQGLGKSPPHHSGFQQYPQTDSSKQLWNPPQVQGSLG
KIMPVKQPYYLQAQDPLKLFEQSLQPPVMQQQPLEKKMKPFPMEPYNQNPSEVKVPEYYW
DSSYGMTDNRVMTQQSNMDRRGKRQGVFCSEQDAVSRMTFEDPKSSPLLPPDLLKSLAAL
EEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSQSSSFLSLSGFSLNQER
YPNNSMFNEVYGKNMNTSTKTEVTPSAAHQETSLYSLFEGTPWSPSLPASSDHSTPASQS
PHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDSRDRRVTDRWKTDKPAMGGFGLDYLPA
TSSSSESSWHQSSAPSGTWTAQGPPAMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQ
QKQKQQRGQGTMNPPH
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgacagattcgaagctgggtccagcagaagtctggacatccagacaggctctacaggac
ttatatcaaaaaatgctagtgactgatttggaatatgctttagataaaaaagtggagcag
gacctttggaatcatgcctttaaaaatcaggttcaggcaaacctttctctctttttagag
gcagctagtggcttctacacacagctattacaggaactgtgcacagtttttaacgtagac
ctgccgtgccgtgtgaagtcttcccagctggggatcattagcaataaacagacgcacacc
agcactattgtgaagccacagtccagctcctgctcctacatctgccagcactgccttgtc
cacctgggagatatcgctcgctataggaatcagaccagccaggcagagtcttactataga
catgcagctcagcttgtcccttctaatggtcagccttataatcagttggctatcctagct
tcttccaaaggagaccacttgaccacaattttctactactgcagaagcattgctgtgaaa
tttcctttcccagctgcctccactaacctacaaaaagcactttctaaagcactggaaagt
cgtgatgaggtgaagactcgatggagcgtgtctgacttcatcaaggcatttattaaattt
catggccatgtgtacctgagtaagagcttggagaagctgagccctcttcgagaaaagctg
gaagaacagttcaagaggttgttgttccagaaggccttcaactctcagcagttagtccat
attactgtgatcaacctgttccaactgcaccacctgcgagacttcagcaatgaaacggag
cagcacaactacagccaggatgagcagctctgctggacacagctcctggctctcttcatg
tcgtttcttggagttctgtgcaagtgtcctttacaaaacgactaccaggaggactctggg
gctgcatatcctcttccagctgtgaaggtttcgatggactggctgaaacttaggcccagt
gttttccaggaggcagtggttgacgaaagacggtacatatggccctggctgatctctctt
ctaaatagtttccagcctcatgaagaagatctatccagtaataatgcaaccccccttcca
gaagaatttgagttgcaaggattcctggctctgaggccctcgttcaggaacttggatttt
tccaaaggccaccaggcaattacaggggataaagaagggcagcaatgtcggatacggcag
cagcgcctgatcttcacaggcaaatggattgctgataaccagccaaggttgattcaatgt
gagaatgaggtaggaaagctgttgtttgtgacggaaatcccggagctcctactggaggac
cctagtgaagccaaagagagtctcgccttacaggagacatccatggcagagccgctgtgt
gctgatgggagccctggactcaaatcagtgctgtcctctggcagaagtctgaacaacagc
tgtgatgcaggagaaaaaccgatggtcaccttcaaagagaacatcaagccccgggagatg
aacagagaacaagggcgcatctaccccccaaaggacttagcgagggagagacgggacttt
agcaaaggaatagtagcaaataagaatgatgggaagaaagaaaacaataaaagaaagaat
gagactaagaaatgtggcttggataagatgcaggaagcaggaaagcagaatgtggcagtt
caggtgaaatcccagacggagatgaggaagactccggtgtcagaagccaggaaaacacct
gtaactcagactccaagtcaggccagcagttcccagttcatccctattcatcacccagga
gctttccctccccttcctagccggccaggatttcctcctccaacctatgttgtcccccct
cctgtggctttctccatgagcacggggtataccttcccgggtggtgtttctgtcccagga
accttcctccagcccacagctcactcgcctgcaggaaaccaggtgcaaggtgggaaacag
tcccacattccttacagccagcagcggccctctggaccagggccaatgacccagggacct
cagcaaacaccacctccttcccagcaacccctctcatctttaccagctcaggcaacagca
cagtccacaagccagttacaggtccaagctctggcccagcagcagcagcaccagtccccc
acgaaagctgtgcaaggcctggggaagagcccgccacaccactccggattccagcagtat
ccacagacagactcatcgaagcagctctggaacccccctcaagtccaaggctccctgggg
aagatcatgcctgtaaagcagccctattacctgcaggcccaggaccctctcaaactcttt
gaacagtcattacagcctcctgtgatgcaacagcaaccgctggagaaaaaaatgaagcct
ttcccaatggagccatataaccagaacccctcagaagtcaaggtgccagaatattactgg
gactcttcctacggcatgactgacaacagggtgatgacccagcagtcaaacatggaccgc
agggggaagcggcagggagtcttctgctctgagcaggatgctgtctccaggatgaccttt
gaggaccccaagagctcccctctgcttcctccggacctgttaaagagtctggctgccttg
gaggaggaggaagagctgattttctctaatcctcctgatctttacccagctctgctgggg
cctctcgcctctcttcctggacgaagcctctttaagtccctgctggaaaaaccatcagaa
ttgatgtctcagtcatcatctttcctgtccctcagtggcttttctctaaatcaggaaaga
tacccgaacaacagcatgttcaatgaggtatatggaaaaaacatgaataccagcacaaaa
acagaagtcaccccttcagctgcccatcaggagacttcactctattctctctttgaaggg
actccgtggtctccatcccttccagccagctcagatcattcaacaccagccagccagtct
cctcactcctccaaccccagcagcttgccaagctcccctccaacccataaccacaattct
gttcctttctccaactttggacccattgggactccagacagcagagaccggagagtcaca
gaccgctggaaaacagataagccagcaatgggagggtttggtctggactatctcccagca
acgtcgtcctcttcggagagcagctggcaccagtccagcgctcctagtggtacctggaca
gcccaaggccctcctgccatggaggactcctcagctgtgcttatggagagcctgaagtcc
atctggtccagttctatgatgcaccctggcccctcggccctggagcagctgttgatgcag
cagaagcagaagcagcagcgcggacaaggcaccatgaacccgccgcattga
DBGET
integrated database retrieval system
