Corvus brachyrhynchos (American crow): 103617427
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Entry
103617427 CDS
T08418
Symbol
DCHS2
Name
(RefSeq) protocadherin-23
KO
K16507
protocadherin-16/23
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cbrc04515
]
103617427 (DCHS2)
Cell adhesion molecules [BR:
cbrc04515
]
Cadherins
Cadherin related
103617427 (DCHS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
103617427
NCBI-ProteinID:
XP_017592236
LinkDB
All DBs
Position
Unknown
AA seq
2662 aa
AA seq
DB search
MSKSFTSFIFTSVVSLQVKATDADADQFGEIEYSLYDGFNFYEKSKAFQIDPHTGQIFVS
QDIDREGDPTTYDLLVKATDGGGLSAQAFVRIEIEDINDNQPVFEQDIYVTSISSHTQLG
TEIINVVATDRDSGIFGVVTYELVPGEFSSFFTVDTSTGIIYLTSALGQLAHSALFLTVS
ARDGGGLPSASNAAVTVNILQTVLVPAIFERSRYTFSVPEDAPEDSVIGTVKAREPPNSL
EVVSYRICSGDPHGKFSIDPQFGIIRTKKQLDHEAQSVVVLTVQSQLGNSPVYSSTQVNI
SVTDINDNPPVFLTKSDKVTISHTQPPGTAVYIAHAEDKDSGLNGAIKYSIASKQSNAFS
IDPKDCGSPPLTSLLVLTVFVEEQTMGPTLVFQSLVYQVEISEATSPGAQILQVQAHSLD
PHSITSNLTYSLEPSTDSVAFGISSDTGWIYLRKHLNYECAQMLSFRALVSASEDENLRQ
NASASIIVNVLDENDHSPMFMRESYFFEVEENPIPSGVVGTITAVDKDSGRNGQLSYFLL
SDGKYFKMNSNTGEIINWAALDREERAHHELRVLATDAGCGMELFRSPTCESAILKMCEV
LEGQPSGTLVTTVFAKDFDSGNNGIILYSIEPEEDIGYFQIDAVSGELRTTRPLSHAERS
DYRMRVTAKDQGMPSLQGHATVYIQVIPLPNRRSGFSQDFKHFVVPENFKPAQVLDSLKV
PDNHLAPNRKLHFSIAKDDDNVHFEIDSLTGDLYLSKELDYETDSHFLLQVIIKDYNNPP
QNSTVFLSIDVEDKNDHSPYFQDDFVVIGVEENVPVGTLVYTFNAKDGDGGFLNSKIEYS
LEMSNMSKNPFLIHPLYGSLTTASPLDREITRSVILTVFAEDQAINLTERRLDSLAVKIV
ILDINDNSPSFMSSPLSYVMEDVEVGFLVHHIVAKDPDEGRNGQVTYHILSGNENKAFVL
DKITGLLTTAHLLDHEVQERYSLTVMALDDGSPALSATQVLTIIVLDVNDETPVFLKQLY
KTAVHENQDPGEFVIKVEAVDRDAGLNSMLQYEILPGAGYEKFKMNSNSGELITAAPLDR
ETQEVFSIKVLVRDSGTPSLSSTVTVICTVLDENDHSPTFLLPPSEIFIPENQEPSVVYI
IRAIDMDAGYNGALRYKIIGGNVGEYFTLNNTSGKLLVTRSLDREDISNFTLVIECHDLG
SPSRSSTAQIYLTVLDENDHSPLFAKTQYQISVTEDLEEGSAILDLSASDEDDGLNGEVM
YSLIDDTYGAFAINSVTGSIVSTKALDRETKSQYTFRAVASDCSTHFPRSTTVSVVVHID
DVNDNDPVFLQSPIKAFVPAETAVNETVATVRAEDVDLGSNGAIVFNLMMAEPVFQIDVK
TGDIILREPLASKDFSTQLLVTASDQGISPRTATAVVIIFTEEQEEAISFSHSLYEASVP
ENSAAGTSLLTVGAYEHKLTGEDIKYSIFSGQEMFSIHPITGTITVKEPKYLDYEVKCKI
HLTVVAENSFNSAFCGVTVLIQDMNDNVPKFEQSYYKASVWEGQSPKTDIIQVFATDLDS
GLNGETEYSILSGNENGAFLIDSTRGILATNTGLDYENTSSYRLVVQAADKGNPRFSATS
IVKIQVLDINDNAPVVQPLGKVEVPENALPGFIVTRVSASDADSRPALQFGFISDNSPGM
KFAIDQYSGVILVVEPLDFEETAVYTLHIIVSDSVHQTAAELTILVLDINDNPPVFTQDF
YQVNVPEFISMDATILTLSAMDRDSERNGMISYQILSSSEGFSIDHKNGTVFTTEAVTQL
KNISIFHLLIEATDGGSPPLSAVTSMEVHVEDVNDCAPRFTKVLYNLSVSEDASVGESIL
LFSAIDCDWTCENTYVEYSIIAGNAENLFSIETSVMGSETSYKLVGSLVLSSALDRERAS
SHQLVLLASDHGTPSLNSTATVLITVLDVNDNPPVFSSPEYHVHVKESIPIGSHITLVSA
KDCDASTNAEITYVIISGNDRGHFCLDGRTGSVNLMKTLDYEDTMKFTLIIQATDGGNYI
KNMAFAVVLVSILDDNDYAPLFLFPSLSCIVSENLPTFSFVCAVCALDFDKGSYGHLTYS
IHSSCLAHREATRDHDMFFIDPLTGDIHTKQMFDYESQNRYCLIIQAKDKGDSLATTTVQ
VDIEGRDEFDPVFTQEHYFFNLPEKNEAGQLIGRVTASDSDGGLDGVVHYSLLKPSPFFS
VNQTSGNIYLTQTVHRKKNGIKRNDDTLELLVRAHSPKIESRFTVCTVFVNVSSSPESDP
TLSAHSLMVSVSTSLTVFLLLAVSLITLTLRLKQKNLMNACVKKEAVSSSATDVNSVRED
EDCQKIQSTESSMLPMGTIAKWLSLAGIGEGKDDDVSCRHSDSSGHGSAEGETAEDEEIK
RIYEYPCRKSISSALSEHGSQMPDSGIPREPDQFSCQSAETDVTATMQSMENMQTIKGES
REEACDTAYAHKILSQTVAKTGIKEKGIMTDLTREYVLMSDRQDSGYDLLATVDTSDEDL
GGSYNWDYVLSCEPRFQPLASVFNDIAELKDENFHIHNFSKDKSLVFPPPLITSVAQPGI
RTVPPRMPNITSGQAFNKCRYPPLIHNHGYPPPTMTPRFSPTLSLLTMQTPSVSPVVSDG
KMIGTCLIDPSYELATEEEIQV
NT seq
7989 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagagtttcactagcttcatttttacctctgttgtctccctgcaggtcaaagca
acagatgcagatgctgaccagtttggagaaattgagtattctctttacgatggatttaat
ttttatgaaaaatccaaagctttccagattgacccacacactggtcagatctttgtgtct
caagacattgacagagaaggagatccaaccacttatgatctcttagtaaaagctacagat
gggggtggtctgagtgcccaagcttttgttcgcatcgagatagaagatattaatgataat
caacctgtttttgaacaagacatctatgtgacaagtatcagcagtcacacacagctggga
acagaaatcatcaatgttgttgccacagacagagattcaggaatatttggcgttgtcaca
tatgaactggtcccaggagaattttcttcttttttcacagtggatacatccacaggaatt
atttacctgacctcagctcttggccagctggcacattctgcactcttcctgactgtttct
gcacgggatgggggtggccttccctctgccagcaatgcagctgtcacagtaaacatcctt
cagactgttttggtccctgccatatttgagagatcccggtataccttttctgttccagaa
gatgcacctgaagacagcgtgattggcaccgtaaaggccagagagcctccaaattcgtta
gaagtggtttcttaccgaatctgctctggtgatccacatggaaagttctccatcgacccc
cagtttggcattatccgcaccaagaaacagcttgaccacgaggctcagtctgtggtggtg
ctcactgttcagtcacagctgggtaactcccccgtctacagcagcactcaagtcaacata
tctgtgacagacattaatgacaaccctccagtatttcttaccaaatctgataaggtaacc
atctcacatacccagcctcctggcactgctgtctacattgctcatgcagaagacaaagac
agtggcctaaatggggcaatcaaatacagtattgcaagcaagcagtcaaatgcttttagc
attgatccaaaggactgtggaagtcctcctctgacttctttgctggtcttgacagtgttt
gttgaagagcagacgatgggccctactttggtttttcaaagcttggtgtatcaagtagaa
atcagtgaagctacctctccaggtgcccagatccttcaggttcaagcccactcgcttgat
ccacacagcattacctccaatctgacatattccttagagcctagcactgattctgttgca
tttggaatcagctctgatactggctggatttatcttcggaaacatttgaactacgaatgt
gcacagatgctaagttttagagccttggtcagtgcctctgaggatgaaaaccttaggcaa
aacgcaagcgcatctataatagtcaatgtcctggatgaaaatgatcattctcccatgttt
atgcgtgagagctacttctttgaagttgaggaaaatccaattcccagtggtgtggttggc
actattacagctgttgacaaagactccggaagaaatggacagctttcctatttcctcttg
tctgatggaaagtatttcaagatgaattccaacacaggtgaaatcataaactgggcggcg
ctggaccgcgaggagcgggcgcaccacgagctgcgggtgctggcgacggacgcgggctgt
gggatggagctctttcggtctccgacctgcgagtctgccatcctaaagatgtgtgaggtt
ttggaagggcagccatcagggacgcttgttactactgtctttgcaaaagactttgattct
ggaaacaacggcatcatattatattcaatagaaccagaagaggatatagggtacttccag
attgatgctgtcagtggagagttaagaacaacccggcctctgtcacatgctgagagatca
gactacagaatgagggtcacagccaaggaccaggggatgccttcgcttcaaggacatgct
acagtttacatccaggtgatcccacttcccaataggagatctggcttctcacaagacttc
aagcactttgttgtacctgaaaattttaagcctgcacaagtgttggactctctgaaggtg
cctgataaccatctagcacctaacaggaaactgcatttcagtattgctaaagatgacgat
aatgttcattttgaaattgacagcttgacaggagacctttacctttccaaggagcttgac
tatgaaacggattcgcactttcttttgcaagttattataaaggattacaataatccccca
caaaatagcactgtcttcctaagtattgatgtagaagataagaatgatcattctccatat
tttcaagatgactttgtagtgattggcgtagaagaaaatgtacctgttgggactctggtt
tacacattcaatgcaaaagatggagatggcggttttctgaacagcaaaatagagtattcc
ttagaaatgagtaacatgagtaaaaatccatttcttattcaccctttgtatggctccttg
accacagcatctccactagacagggagattactcgttctgtgatcttgacagtgtttgca
gaagaccaggcaataaatctgactgagcggaggctggattccctggctgtgaaaattgtt
attttagatatcaatgacaacagtcccagttttatgtcttcgcccctttcctatgtcatg
gaggatgtggaggtaggcttccttgtacaccacatagttgcaaaggatcctgatgaggga
agaaatggacaagttacgtatcacattctttcaggcaatgaaaacaaagcatttgtactg
gataaaatcacaggactcttaactacagcccaccttctagaccatgaggttcaggagcgc
tacagtttgacagtcatggctcttgatgacggcagcccagctctctctgccacacaagtt
ctaaccatcattgttcttgatgtgaatgatgagaccccagtatttctgaagcaactttac
aagactgcagttcatgaaaaccaagatccaggggagtttgtcataaaagtggaggctgtg
gaccgagatgcaggactgaattccatgcttcagtatgaaatcttaccaggagctggttat
gagaaattcaagatgaactcgaacagtggagaactcataacagctgcaccactggacagg
gaaacccaggaggttttcagtattaaagttttggttcgggacagtggaaccccgtcgctg
tcaagcacagtgacagtaatctgcacagtgctggatgaaaatgatcactctcccacattt
cttcttcctccctctgagatcttcattccagagaaccaagagccttctgttgtttacatt
atccgggctatagatatggatgctggctataacggagctctaagatacaaaataattggt
ggaaatgttggagaatacttcacactaaataacacatcaggcaaattgctggtcactcgt
agcttagacagagaagacatcagcaatttcactcttgtaattgagtgccatgacctaggc
agtccctcaagaagctccactgcacagatctatctaacagtcttggatgaaaatgaccac
agcccgttgtttgcaaagacccagtaccaaatctctgtgacagaagacctggaggaaggc
tcagccatcctggacctctctgcttctgacgaagacgatggcctgaatggtgaagttatg
tactccctcattgacgacacctacggagcatttgctatcaacagtgtcacaggatccatc
gtttctacaaaggcactggaccgggaaaccaagtcccagtacacatttagggctgtagca
agtgactgtagcacccattttccaaggagcaccactgtcagtgttgtggtgcacattgat
gatgtcaatgacaatgatcctgtttttttgcagagtcctatcaaggcctttgtgcctgct
gaaactgctgtgaatgagacagtagccactgtgagagcagaggatgtggatctgggatcc
aatggagctattgtttttaatttgatgatggcagaacctgtatttcagattgatgtgaag
acaggtgacatcattctccgggagcccttggcttccaaggacttcagtacccagctgcta
gtgacagcttcagatcaaggcatctcacctcgaacagccacagctgtggtcattatcttt
acagaagaacaagaggaggccatctcattcagccacagcctgtatgaagcaagtgtgcct
gagaacagtgcagcaggtacatcacttctaacagtaggagcttatgaacacaaacttaca
ggagaagacataaaatacagcatcttcagtggccaggaaatgttctccatacaccctatt
acaggtacaatcacagtaaaagagccaaagtaccttgattatgaagttaagtgtaaaata
catcttacagttgtggctgaaaatagcttcaattcagcgttctgtggggtgacagttttg
attcaagatatgaatgacaatgtacctaaatttgagcaaagctattacaaagcatcggta
tgggaaggccagagtcctaaaacagacatcatacaggtatttgcaaccgaccttgacagt
gggctgaatggagaaactgaatactcaattttatctggtaatgaaaatggagcatttcta
attgattcaacgcgaggaattctagcaactaatacaggcctagattatgaaaacacttcg
tcttacaggttggttgtacaagctgctgataaaggaaaccccagattctctgctacaagt
attgtgaagatacaagtgttagatattaatgacaatgctccagttgtccaaccactaggt
aaagtggaggtcccagaaaatgccctgcctggttttatagtgactcgagtgtcagcaagt
gatgcagactccagaccagcacttcagtttggttttatttctgataatagtcctggaatg
aaatttgccatcgatcaatacagtggtgtaatcttggtggtggaaccattagattttgaa
gaaactgctgtatatacactgcatatcatagtttcagactctgtgcatcaaacagcagca
gaactcaccattcttgtcttggacatcaatgataaccctccggtgtttactcaagacttt
tatcaggtgaacgtgccagagttcatttctatggatgccactattctgacactctctgcc
atggatagggattctgaacgtaatggaatgatttcctaccaaatcctctcttcctctgag
ggattttccattgatcataagaatggtacagtgttcaccacggaagcagtcacacagctg
aaaaatatttccatttttcatctcctgatagaagccacagatggtggcagtccccctctg
agtgcagttacctccatggaggtgcatgtagaagatgtaaatgactgtgcccctcgcttc
acaaaggttctgtacaatctcagtgtgagcgaggatgcctcagttggagaaagtatcctc
ctgttctcagccatcgactgtgactggacatgtgaaaacacctatgtcgaatactctatt
attgctggcaatgctgagaatttattctccatagaaacaagtgtcatggggtcagaaaca
tcctacaaacttgtgggcagtcttgttttgagcagtgctcttgacagggaaagagcttct
tctcaccagttggtcctccttgcctctgatcatggaacaccctccttgaattcaactgct
acagtactaataactgtgctggatgttaatgataatcctccagtatttagcagcccagag
taccatgttcatgtcaaagaaagcatccctataggcagtcacatcactttggtttcagca
aaagactgtgatgccagcactaacgcagagatcacttatgttatcatctctggaaatgac
agagggcatttttgcttggatggtagaacaggatctgtgaatttgatgaaaacactggat
tatgaggataccatgaaattcactttgattatccaagccacagatggaggaaattatatt
aaaaatatggcttttgctgttgttcttgttagcatcctagatgacaatgattatgcccca
ctttttttgtttcccagtctgagctgcattgtcagtgaaaatctgcctaccttttctttt
gtgtgtgctgtttgtgcactggattttgacaaaggctcctatggacaccttacctactcc
attcactcttcatgtttggctcatcgtgaagctactagagaccatgacatgttctttatt
gatcctttaacaggagatattcatacaaagcaaatgtttgattatgaaagtcaaaatagg
tactgtctaataatccaagcaaaagacaaaggtgactcactggctaccactacagttcag
gtagatattgaggggagagatgaatttgacccagtgtttacacaagaacattatttcttt
aatctccccgagaagaacgaagcaggccagttgattggcagagtaacagcatctgacagt
gatggtggactggatggagttgttcattactcccttctaaaaccttctccattcttttct
gtgaatcaaaccagtggtaatatttatttgactcagactgttcacagaaagaaaaatggc
atcaaaaggaatgatgatactctggaattgttggtaagagctcatagccccaaaattgag
tcgaggttcacagtatgcacggtttttgtaaatgtttccagttctcctgagagtgatccc
acactgtcagcacacagcctgatggtgagtgtttctacctcactgacggtgttcctgctg
cttgctgtcagtcttatcacacttaccctgagacttaaacagaaaaatttgatgaatgct
tgtgtgaaaaaagaagcagtatcctcctcagctactgatgtgaattcagtaagagaagat
gaggactgccagaaaatccaaagtactgagagcagtatgcttcccatgggcactatagca
aaatggctgagcctagcaggaatcggagaggggaaggatgacgatgtctcttgcaggcat
tcagactccagtggccacggttctgctgaaggagagactgcagaggacgaggaaatcaaa
aggatctatgagtatccttgcagaaaaagcattagctcagcactgagtgagcatggctca
cagatgccagattcggggatcccaagagagcctgatcagttctcctgtcagtctgcagaa
acggatgtcacggctaccatgcaaagcatggagaacatgcagaccattaaaggagaaagc
agagaagaagcctgtgacacagcctatgcacacaaaattttgtctcaaacagttgcaaaa
actggaataaaagagaaaggcataatgacagacctcacaagagaatatgtcctgatgtca
gataggcaagactctgggtatgatttgcttgcaactgttgacacctctgatgaggatctt
ggaggtagttataactgggattatgtgctcagctgcgaacccagatttcaacctcttgcc
tcagtgtttaatgatattgcagaactgaaagatgaaaattttcacattcacaacttctct
aaggataaatctcttgttttccctcctcccttgataacatcagtagcacagcctggcata
aggacagtgccaccaagaatgccaaatataacatcagggcaagcttttaataaatgccgt
tatcctccccttatccataatcatggataccctccaccaaccatgacccccagattttct
cctactctctctttacttactatgcagacaccttctgtttctccagtagtgtctgatggg
aaaatgataggaacatgtcttattgatccaagctatgaacttgcaacagaggaagaaatt
caggtctag
DBGET
integrated database retrieval system