Corvus brachyrhynchos (American crow): 103617533
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Entry
103617533 CDS
T08418
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103617533 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbrc04131
]
103617533 (TGFBRAP1)
Membrane trafficking [BR:
cbrc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103617533 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
103617533
NCBI-ProteinID:
XP_008634054
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MSVKAFKLVSAIEREMLMGDKNYINIECIECCGKNLYIGTNDCFIYHFLLDEKVSTAGKI
TFAATKQLHKYLGLKKPVSELKAASALTRLLVLCDNTITLVNMINLEPVPTGARIKGAVT
FTLNENPVSGDPFCVEVCIISVKRRTIQMFMVFEDRVQIVKEVFTPEQPCAVAVDGYYLC
LALTTQYIILNYNTGVSQDLFPYCSDEKRPIVKRIGRQEFLLAGPGGLGMFATVDGISQR
APVHWSENVIGAALCFPYVVALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGKVIVAT
NKGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYKRILQQAGFIQF
AQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFIRSHPPLHEYADLNQLTQGDQEKM
TKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEANHESLLDLLVSENFCLLTDSAA
WLEKHKKYFALGLLYHYNGQDAAALQLWVKIVDGDIQDSTRSDLYEYIVDFLTFCSDQDL
VWKYSEWILQKNEEVGVQIFTKRPLEEQEKNNINPDDIVSCLNKYPKARVKYLEHLVLER
KIEKEKYHTHLAVLYLEAILQLKSVTTDNCTETTELLLKLRSLLQKSDLYRIRFILEKIQ
GTDLHMESAILYGKLEEHEKALHILVHELKDFRAAEEYCIWNSEKRDVQYRQRLFHMLLS
VYLTPGTSDCALVMAAVDLLNNHAAEFDAGLVLQVVPDSWSVQLLSPFLAGAVRQSIHTK
RMTQVALGLAQAENLIYKHEKVKQKGSPILLSDKKVCQVCQNPFCEPVFVRYPNGSMAHT
HCAANRHLNSNVTHHSPSSSNQT
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttaaagctttcaagctcgtttctgctattgagcgggagatgttaatgggagac
aaaaattacatcaacatcgagtgcattgagtgttgtgggaagaacctctatattggaacc
aatgactgctttatctatcactttctgttggatgaaaaggtatcgacagctggaaaaata
acttttgctgccaccaagcaactacacaaatacctgggcttgaagaagcctgtgagcgag
ttgaaagcagcctctgccctcaccagactgcttgtgctttgtgacaacacgataacacta
gtgaacatgatcaacttggaacctgtccccactggtgctaggatcaaaggagctgtgacg
ttcacactgaatgagaaccctgtgagtggggatcctttctgcgttgaagtttgcattatc
tcggtcaaacgtcggaccattcaaatgttcatggtgtttgaagacagagtccagatagtg
aaggaagtgtttactccagaacaaccctgtgctgtggctgtagatggttactacttatgc
cttgcccttactacacaatatataattttgaattataatactggtgtctcccaggaccta
tttccatattgcagtgatgagaaacggccaattgtgaaaaggataggcagacaagagttt
ctgttggctggccccggaggcctaggcatgtttgctactgtagatgggatttcgcagcgt
gccccagtgcactggtcggagaatgtgattggggcagctttgtgctttccttacgtggtt
gctctcgatgatgagttcattacggtgcacagcatgctggaccagcagcaaaagcaaacc
ctgccttttaaagaaggtcacattctacaggactttgaaggaaaggtgattgttgctact
aacaagggtgtgtatatcttggttccactacctttggaaaaacagattcaggatcttcta
gctagccacagagtggaagaagcccttgttctagcaaaaggagctcgaaggaatattcca
aaagagaaatttcaggtaatgtacaaacgaatcctgcagcaagcaggttttatacagttt
gcacagcttcagttccttgaagcaaaagaactcttcagaagcggccagcttgatgtccgg
gagctgatctctctctaccccttcctgttgcctacttcctcttcatttatccggtctcat
ccccctctgcacgagtacgcggacctgaaccagctgacccaaggggaccaggagaagatg
acaaaatgcaaacgattcctcatgagttatttgaatgaagtccgcagcactgaggttgca
aatggctacaaggaggatatcgacacagctttactcaagctgtatgcagaggcaaatcat
gaaagcctgctggatctcctagtttcagagaacttctgtcttctaacagatagtgctgct
tggctggaaaaacacaaaaagtattttgcacttggtctcctgtatcactacaatggtcag
gatgctgcagcactgcagttatgggtgaaaatagttgatggagatattcaagattctaca
cgttcagatctctatgagtacatagtagacttccttacattctgctcggaccaggaccta
gtgtggaagtactctgaatggattctacaaaaaaatgaagaggttggcgtacagattttc
actaaaagacctttggaagaacaggagaaaaacaacattaatccagatgatatagtcagt
tgccttaacaaatatcctaaagcacgtgtcaaatatctagaacatctagtactggaaaga
aaaatagagaaagaaaagtaccatactcatctagctgtcttgtacttggaggcaatactt
cagctaaaatctgtgaccacagataattgtacagaaacaactgaactgctgttgaaactt
cgcagtctgcttcagaaatctgatctttatagaattcgttttattttagaaaaaatccag
ggcacagaccttcatatggaaagtgcaattttatatgggaaattagaagaacacgagaag
gctttgcatatccttgtccatgagttgaaggacttccgtgctgctgaagaatactgtata
tggaactctgagaagagagatgtgcagtacagacagaggcttttccatatgctgctgtca
gtgtatttaactccaggcacttcagattgtgcacttgtcatggctgctgtggatctcttg
aataaccatgctgcggaatttgatgcaggtctagttctgcaggtggtgcctgacagctgg
tcagtgcagctcctctccccattcctggctggagcagtgagacaaagcattcacacaaaa
agaatgactcaggtggcacttgggttagcacaagctgaaaacttaatctacaagcacgag
aaggttaaacaaaaaggatccccaattcttctttcagacaagaaggtgtgtcaggtgtgc
caaaatcctttctgcgagcctgtgtttgtaagatacccgaatgggagtatggcccacaca
cactgtgctgcaaacagacatctcaattccaatgtgactcatcactctcccagctccagc
aatcagacttga
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