Corvus brachyrhynchos (American crow): 103617919
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Entry
103617919 CDS
T08418
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103617919 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbrc03000
]
103617919 (ATRX)
03036 Chromosome and associated proteins [BR:
cbrc03036
]
103617919 (ATRX)
Transcription factors [BR:
cbrc03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
103617919 (ATRX)
Chromosome and associated proteins [BR:
cbrc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
103617919 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
103617919
NCBI-ProteinID:
XP_017593039
LinkDB
All DBs
Position
Unknown
AA seq
2338 aa
AA seq
DB search
MENSRDEGSSSSERTKSLGLSRSKRKPTVVTKYVGSDDEQIVDETVNEDISNENSENDVD
MQSLPKEEGLHGIVSCTACGQQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDG
MDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTILDENNQWHCYICHPEPLLD
LVTACDSVFENLEQLLQQNKKKMKVENEKSKIYDHTVKFSPKRNNANCNGEEKKLDNSYS
GSLTYSYKALMVPKDLLKKTKKLVETTTNLNSSFVSFLKNAAENVEISPTVQLCQLKAFK
SVLSDMKKAHLSLEEGLNLEIQALNVKIKDKNTKEKKTEVRSEKNEVKKDEGKEHVALKE
DDAVQTQKKVVSERPDSEPMDQSVPSVEQTDNKAAPGEEKKSGRNEEPQYEPNSTEALDM
DIVSIPSSVPEDIFETLESAMEIQMPSDEQDSGNTAADHETLNPNTKLTTPVKDTKGGTK
LKSSAKGTKELIVKLTPVSLSESTLKAEDQDNSVEKDSKDVDASKDVDASQPKAANCDSV
KQNHNVGSEPSTENEAVPVEDADLRRSPRVKTTPLRRPTDISPLTSNSEEDSNDTSNEKR
KRKSSKQPRRKNDKRNSSDSTADGPSPNKLSKSKKPYDLDHSSDSDEMPAVLKEAGMMSR
SSSDSESNSEVPANNQKTSDFQKSQPVKDENGKRKRKSSSSGSDLDAKRGKSAKNAAAAK
KKRQNYSDSSNYDSELEKEIKMLSKIEAAKKSKKTYSQKDDSYDSSEEEQRKKVSSKRKV
NLKKKRGKSSEDDDAEKSSPEKEINHSSKDKKTGKRSAAKEKINRDSKEKSAKGKHDESS
DVEKSSLEKEESPEVKKKKDLKKKKAQDDSSSESTEKSAKKEHKLESSKDRLKNKKGSES
KAKQSEKLKKKGLKKEQGDSSSDLDKSSPEKGSSNSSENDKIKKEPVFTEKRNLRERVAK
RVHIDLSSDTEKSPQKEESSSDDAVRCKKRTETKEKKKISHKKKISKKEQNDSSSSDEES
YEDTKKKIKRGSVKESKKSNLKKKVAKKKVVVTSSSSSDKEENDDQNSTGDGSSDEQKIR
PVTESLMLSADAGFCQSSGDEGEALSRTIPMEEEEDDDDDDPENRIAKKMLLEEIKANLS
SDEDTSSDEQPEEGKKKPAKQTENTGDDGENEKEDNKSEKEEGNSESDSEEEETSKKPRY
RHRLLRHKLTVSDGESGEEKKVVKPKDKKEGGKRRNRRKVSSDDSNDSEFHESAVSEEVS
ESEDDQRPRTRSAKKAEAEENQRSYKQKKKRRRIKVQEDSSSENENKSNSENEDNDDSKS
PGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPLKCP
ITTKLVLDEDEETKEPLVQVHRSIVTRLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCIL
AHCMGLGKTLQVVSFLHTVLLCDKLDFRTALVVCPLNTALNWLNEFEKWQEGLEDEERLE
VCELATVKRPQERSYMLQRWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPG
PDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGS
IKEFRNRFINPIQNGQCADSTLVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYE
YVLEVRMTPIQCKLYQYYLDHLTGVGGGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLD
YISKENKGYFDEDSMDDFIASDSDETSMSLSSDDYAKKKKSKGKKVKKESSSSGSGSDND
VEVIKVWNSRSRGGGEGNVEDLTNNPASTKSDEGKATSSSNPGSPAPDWYKDFVTDADAE
VLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDFLELANREKSDRDKPPIYKG
EGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVI
IFDASWNPSYDIQSIFRVYRFGQNKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQ
QVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQINKEYIVGYHE
HDSLLDHKEEEELTEEERKAAWAEYEAEKKGMTMRFNMPTGTNMIPTNFNSQTYIPYNLG
ALSAMSNQQLEDLINQGREKVVEATNSVAAARIQPLEDIISSIWKENLTLTESQVQALAL
NRQASQELDVKRREAIYNDVLGKQQMLIGCVQRILMNRRLQHQENQQQQQQMSYQQAAMG
HLMMPKPPNLIMNPSSYPTIDVRGMYQSVSGGMQPPPLQRAPPPMRGKNPGPSQGKSM
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagtagggatgagggaagtagttcttcagaaagaaccaaatccttaggatta
tcccgttccaaaaggaaacctacagttgtaacaaaatatgttgggtcagatgatgagcaa
atcgtagatgaaactgtaaatgaagatatttcaaatgagaactcagaaaatgatgtagat
atgcaaagcttgcctaaagaagaaggactccatggaattgtaagttgtacagcttgcggg
cagcaggtgaaccattttcaaaaggattcaatctatagacaccctacactgaaagtgctt
atatgtaagacttgctacaagtattacatgagtgatgacattagtcgtgactcggatggg
atggatgaacagtgtaggtggtgtgctgaaggtggaaatttgatttgctgtgacttttgc
cataacgccttctgtaaaaagtgcattttgcgcaacctgggccgaaaggagctctcgact
atcctggatgaaaataaccagtggcactgctatatttgccatccagagcctttgttggac
ttggtcactgcgtgtgacagtgtctttgaaaatttagaacagttacttcaacaaaacaaa
aaaaagatgaaagttgaaaatgaaaaaagtaaaatatatgaccacacggtcaagttttct
ccaaagagaaataatgcaaattgtaatggggaagaaaaaaaattagataattcatattca
ggttcgctaacatattcgtataaagcactaatggtgccaaaagacttgcttaagaaaaca
aaaaaactggttgaaactacaacaaatctgaattctagctttgtaagctttttgaaaaac
gctgcagaaaatgtagaaataagcccaactgtgcaactgtgccagctgaaagcttttaaa
tctgtgctgagtgacatgaaaaaagctcatctgtcactagaagaaggcctgaacctggag
attcaagcattgaatgttaaaatcaaagataaaaataccaaagagaaaaaaactgaggtt
agatcagaaaaaaatgaggtgaaaaaagatgaaggaaaggaacatgtggcattaaaagag
gatgacgctgtacagacacagaaaaaagttgtgtcggagcggcctgacagtgagcccatg
gatcaaagtgttccctcagtggaacagacagataacaaggcagctcctggggaagagaaa
aaatctggcagaaatgaagaaccacagtatgagcccaacagtacagaggctttagacatg
gatattgtgtccatcccctcgtctgttcctgaagatatttttgagactctggaatctgct
atggagattcagatgccatcagatgagcaggacagtggaaacacagcagcagatcatgag
actctaaatccaaatacaaaattgaccactcctgtgaaagataccaaaggtggtaccaag
ttaaaatcgtcagcgaaaggaacaaaagaattgattgtcaaattgactcctgtttccctt
tcagagtctacacttaaagctgaagatcaagacaacagtgtagaaaaggacagtaaagat
gttgatgcatctaaagacgttgatgcatctcaacctaaagcagcaaactgtgattctgta
aaacaaaaccataatgttggcagcgagccctccacggagaacgaggctgtgcccgtggag
gacgcggatctccggaggtcgccgcgcgtcaagaccaccccgctgaggcgccccacggac
atcagccccctgacatccaactcagaggaggacagcaatgacacgagcaatgaaaaacgg
aagagaaaatcatccaagcagccaaggaggaaaaacgataaaagaaattcttctgacagc
actgctgatggtcctagtcctaacaaactttccaaatccaaaaagccatatgacttagat
cacagctcagactctgatgagatgccagctgtccttaaagaggcagggatgatgagtcgc
agctcctcagacagtgaaagcaacagcgaagtgccagcaaataatcagaagacttcagat
tttcaaaagagtcaaccagtaaaggatgaaaacgggaaacgaaaaaggaaaagttccagt
tccggttcagatttagatgctaaaagaggcaaatcagctaaaaacgctgctgctgctaaa
aagaaacgacaaaactactcagattcttcaaactatgattctgagttggaaaaagagata
aaaatgttgagtaaaattgaggctgcaaaaaaatcgaagaaaacatactcccaaaaagat
gatagttatgattcatctgaagaagagcagaggaaaaaagtaagcagtaagagaaaggta
aatctgaagaagaagagaggtaaatcttctgaagatgatgatgctgagaagtcttcccca
gagaaggaaattaatcactcttctaaagataaaaaaacgggtaagaggtcagctgctaag
gagaagataaacagagactcaaaagaaaaatctgcaaagggaaaacacgatgagtcttct
gatgttgagaagtcttcgctggagaaagaggagagtcctgaagttaagaaaaagaaggat
ttgaaaaagaaaaaggcacaggatgattcttcttctgagagtactgagaaatctgcaaag
aaagagcacaagttggagtcttccaaagacagactcaagaacaaaaaaggatcggaaagc
aaagcaaagcaatctgaaaaactgaaaaagaaaggtttgaagaaagaacaaggtgattcc
tcttctgatcttgataagtcatctccagagaaaggaagtagcaattcttctgaaaacgac
aaaattaaaaaggaacccgtgtttacagaaaagaggaatttgagagagagagtagctaaa
agagtgcacattgatttatcctctgatactgagaaatctccccaaaaagaggagagttct
tctgatgatgccgtgcggtgtaaaaaacgaactgaaacgaaagaaaagaaaaaaataagc
cacaaaaagaaaatttccaagaaagaacagaacgactcatcctcttctgatgaggagtcc
tatgaagacactaagaaaaagattaaaagaggatcagtaaaagaaagtaaaaagagcaac
ttaaaaaagaaggtggcaaaaaagaaggtggttgtcacttcctcttcctcgtctgataag
gaagaaaatgatgatcagaattccacaggcgatggaagcagcgacgagcagaagatcagg
ccggtgaccgaaagcttgatgctgtctgctgatgcaggattttgtcagtcatcaggagat
gagggagaggctctatcaaggactatcccaatggaggaggaggaagatgatgatgatgac
gaccctgagaatagaattgccaagaaaatgcttttagaagaaatcaaagccaatctttcc
tctgatgaggatacgtcttcagatgagcagccggaggaaggaaagaagaaacctgcgaag
caaactgaaaacacaggagatgatggagagaatgaaaaggaagacaataagtctgaaaag
gaagaaggtaattctgagtcagattcagaggaagaagaaacatctaagaagcccagatac
agacacagactgctgaggcacaagctcaccgtgagtgatggggaatctggagaagaaaaa
aaggtggtgaaaccaaaagacaaaaaagaaggggggaagcgcagaaatagaaggaaagtg
agcagtgatgactcaaatgactccgagttccacgagtctgcagtgagtgaggaggtcagt
gagtctgaggatgaccaacgaccaaggacaagatctgccaaaaaagctgaggcagaagaa
aaccagcgcagctacaaacagaaaaagaaacgaaggaggataaaggttcaggaggattcg
tcaagtgaaaatgagaataagagtaactccgagaatgaggacaatgatgactcaaagtct
cctggaaaaggcaggaagaaaataagaaaaattattaaagatgataaacttcgaacagaa
acgcaaaatgcacttaaagaagaagaagaaagaagaaaacgtatagcagagagagaacgg
gagagagagaaattgagagaggtgatagagatcgaagatgcttcacctctgaaatgtccc
attacaaccaagctggttttagatgaagatgaagaaaccaaagaaccattagtgcaggtt
cacaggagtatagtgaccagactgaaaccacaccaagtagatggtgttcagttcatgtgg
gattgctgttgtgaatctgtaaaaaaaaccaagacatctcctggctctggctgcattctt
gctcactgtatgggcctggggaaaacattacaggtagtaagttttctccacacagtcttg
ctatgtgacaaactggattttcggacagctctggtcgtgtgtccactcaacactgccttg
aactggctgaatgagtttgaaaaatggcaagaaggtttggaagatgaggaaagactagag
gtctgtgagctggcaactgtgaaaaggcctcaggagaggagctacatgctgcagcgctgg
caggacgagggaggtgtgatgatcattggctacgagatgtaccgaaatctggcccaaggc
aggaatgtgaagagtagaaaacttaaagaaatatttaataaagctttagtcgacccaggt
cctgactttgtggtgtgtgatgaaggtcacatattgaaaaatgaagcatctgcagtctct
aaggcaatgaattctattcggtctaggagaagaataattctgacagggacaccactgcag
aataatcttatagaatatcactgcatggttaacttcattaaggagaatttgcttggctca
attaaggaattccggaatcgattcatcaatcccatccagaacggtcagtgcgcagactcc
actctggtggatgtcagagtgatgaagaaacgtgctcacatcctctatgagatgttggct
ggctgtgttcagaggaaagattacacagcattaacaaagttcctgccccccaaatacgag
tacgtgctcgaggtgcggatgaccccgatccagtgcaagctgtaccagtattacctggat
catttgacaggtgtaggtggtggaaatgaaggtgggagaggcaaagctggagctaaacta
ttccaggatttccagatgttgagcagaatctggactcacccttggtgtttgcagctggat
tatattagcaaagaaaataagggctattttgatgaagacagcatggatgacttcatagct
tcagattccgatgaaacttccatgagcttaagttctgatgattatgcaaagaaaaaaaaa
tccaaggggaaaaaggtgaagaaagagagtagctcaagtggaagtggcagtgataatgat
gttgaagtcattaaagtctggaattcaagatctcgtggaggtggggaaggaaatgtagaa
gatcttacaaacaaccctgcatcaacaaagtcagatgaaggcaaagctacatcatcttcc
aatcctggtagcccagctccagactggtacaaagattttgtcactgatgcagatgctgag
gtgttggaacattctgggaaaatggtgcttctctttgaaattcttcgaatggcagaggag
ctgggagacaaagtcctagtgttcagccagtccctaatatctctggatttgatagaagat
ttcctggagctggctaacagggagaagtctgacagagataagcctcctatctataaaggt
gaaggaaaatggttcagaaatattgattattatcgcttggatggctcaaccacagctcag
tccagaaagaaatgggctgaagagttcaatgatgaaactaatgtgagaggccgcttgttt
atcatatccactaaagcaggttccctgggaataaacctggtggctgctaacagagtcatc
atctttgatgcctcttggaacccctcctatgatatccagagcatcttcagggtttatcgc
tttgggcagaacaagcctgtgtttgtctacaggtttttggctcagggaaccatggaggac
aagatctacgaccggcaggtgacgaagcagtcgctgtccttcagggtggtggaccagcag
caggtggagcgtcacttcaccatgaacgagctcaccgagctctacaccttcgagccagac
ctgctggatgaccccaactcggagaagaagaagaagagggacacccccatgttgccaaaa
gacacgatcctggcagagctgctccagatcaacaaggagtacatagttgggtatcatgaa
catgattcactcctggaccataaggaggaagaggaactcactgaagaagaaaggaaggca
gcctgggcagaatatgaagcagaaaagaagggcatgaccatgcgtttcaacatgccaaca
gggaccaacatgattcccacaaatttcaactctcagacatatattccttacaacttgggt
gctctgtcagcaatgagtaaccaacagctggaggacctcattaatcaaggaagagagaag
gtagtggaagcaaccaacagtgtggctgcagcgagaatccagccccttgaagacatcatt
tcatccatatggaaagaaaacttaaccctgacagagagccaggtgcaggccctggccctg
aacagacaggcaagccaggagctggatgtgaagcgccgagaagccatttacaacgacgtc
ctcggcaaacagcagatgttaatcggttgtgtccagaggatcctgatgaacaggcggctc
cagcaccaggaaaaccagcagcagcagcagcagatgtcctaccagcaagcagccatgggc
cacctcatgatgccaaagccaccaaatttaatcatgaatccttccagctacccaaccata
gatgtgagaggaatgtatcagtcagtgtctggtgggatgcagccaccacccctacaacga
gcaccacccccaatgagaggcaaaaatccagggccttcccaagggaaatcaatgtga
DBGET
integrated database retrieval system
