Corvus brachyrhynchos (American crow): 103617929
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Entry
103617929 CDS
T08418
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103617929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrc03019
]
103617929
Messenger RNA biogenesis [BR:
cbrc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103617929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
103617929
NCBI-ProteinID:
XP_017593036
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MCETDSSQQKQSQARRMDFFVRHTESAHPLQDAPQESRPVNNEDREMSQHALPSGEDDED
DSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYGASASAKLQPKGIDLDAAGN
INGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWKAYCEKQRRLQLGLDPAPPIS
TENKITVQQGRTGNAEKEVENNIIKTEFKTDFLALVGGRMKAGPPPNRKLGGTIDVIGGQ
AGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPPQQPQQPSQPQQPPQQQPFAPPAGPP
PPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLFPPPLAPPPALLIPTLDGQP
ASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTVDKGTSSSSSSHWEYSGSRRERER
ERERERDRERDRDRDRTPTTSEYNNDDERYRYYSRERSYDFERDYRRSRDRSREREERHR
ERRHRDKDDSSKHKSSRRKQHESEEGESHRRHKHKKNKRSKEEKEASEDGAQEGEEQDTK
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaaactgattcttcccagcaaaagcaaagccaagccaggaggatggattttttt
gtcaggcacacagaatctgctcatcctctgcaggatgctccccaggagagccggcccgtc
aacaacgaggacagagagatgtcccagcacgcccttcccagtggtgaggatgatgaggat
gacagtgacagtgacagcgatgacgatgacgtgaaggttacaattggcaacatcaaaacg
ggagcgccttcctacatgggaactcctatgaatctaaacttaaaaacgggtagaggctat
ggagcatcagcttcagccaaattgcagcccaaaggtattgacttggatgctgcagggaat
ataaatggattgcctgtgatagaagtggatttggattcatttgaagacaaaccatggagg
aaaccaggtgctgatctttccgattactttaattatggattcaatgaagaaacatggaaa
gcttattgtgaaaagcagcggcggcttcagctggggctggaccctgctcctcccatcagc
actgagaacaagatcacggttcagcagggaagaactggaaatgctgaaaaagaagtggaa
aacaacatcatcaaaacagagttcaaaacagacttcctggccctggtgggaggacgaatg
aaggctgggcctcctcccaacaggaagctgggtgggaccattgatgtcatcgggggccag
gcaggcacgatccggagggtggagggaagacgccgggataaacacgcctcggaggagaac
cccattcaggtcctgggagaccatggaagcaagccacagcccccccagcagccccagcag
ccttcccagccccagcagcctcctcagcagcagccattcgctccaccagcagggcctccg
cctcccccactcgctgggcctcctcctccacatttccttcaccctcctcctccagtgact
tctgttccacctcccctgcatcctccgggcctgccacctccaggtccaattccagggttg
ttcccacctcctctggcaccaccaccagctctcctcatcccaaccttggatgggcagcca
gccagctacaacaacaggcagccgcctccctttggctacaactctgcagattcaggtttc
atcagctatccccccatctccacgtcccacacgccctgggtgaccacggtggacaagggc
acgagcagctccagcagcagccactgggaatattcgggctccaggcgggagagggagcgc
gagcgcgagcgggagcgggacagggagcgagaccgggaccgcgaccgcaccccgaccacc
agtgaatacaacaatgacgacgagcggtaccgctactacagccgcgagcgcagctacgac
ttcgagcgcgattaccggcgcagccgcgaccgcagccgcgagcgcgaggagcggcaccgc
gagcgccgccaccgcgacaaggacgacagcagcaaacacaaatcctcccgcaggaagcag
cacgagagcgaggagggcgagagccaccggcgccacaagcacaaaaagaacaagcggagc
aaggaggagaaggaggccagcgaggacggggcccaggagggcgaggagcaggacaccaag
gagtga
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