Corvus brachyrhynchos (American crow): 103618440
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Entry
103618440 CDS
T08418
Symbol
NPC1
Name
(RefSeq) Niemann-Pick C1 protein
KO
K12385
Niemann-Pick C1 protein
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cbrc04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
103618440 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
103618440 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbrc02000
]
103618440 (NPC1)
Transporters [BR:
cbrc02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
103618440 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
103618440
NCBI-ProteinID:
XP_017593739
LinkDB
All DBs
Position
Unknown
AA seq
1280 aa
AA seq
DB search
MGRAGISLQLLLPLQLLLPVRVLPQKCVWYGECGVASGDKRYNCAYDGPPKALPEDGYDL
MQELCPGLFFGNVSTCCDVHQLQTLKNSLQLPLQFLSRCPSCFYNLINLFCELTCSPSQS
DFLNVTSTIPYYDPVLKENRSSITELEYFIGDRFANAMYNACRDVEAPSSNVKALGLLCG
KDVKDCSATNWIEYMFSKDNGQTPFSIIPIFSDVPVLGMNPMNNATKGCNESMDDSTGPC
SCQDCSIVCGPKPQPPPLPPPWLLFGLDAVYVIMWISYMGFLLIFFALVFGVWCYRRRHF
VSEYTPIDSNVAFSVNSHGDNGKITCGERLGERFENGLRMTFTSWGAFCVRNPRPVILFS
VVFIAMCCSGFVYIKATTNPVDLWSAPSSQARKEKEYFDMHFGPFFRTEQVIIQAPKSHP
ETYSPYPSGDDVPFGPPLTKDILHQVLDLQDAIVNITASYDNETVMLKDICLAPLAPYNN
NCTILSVLNYFQNSHSVLDHTVGDEFFVYADYHTHFLYCVRAPASLNDTSLLHDPCLGTF
GGPVFPWLVLGGYDDDNYNNATALVITLPVNNYYNDSKKLMKALAWEKEFINFLKSYNNS
NLTISFSAERSIEDEINRESNSDISVVLISYLVMFVYISIALGHIQSCRRLLVDSKISLG
IAGILIVLSSVACSIGIFSYFGIPLTLIVIEVIPFLVLAIGVDNIFIMVQTLQRDERLQG
ETLDQQIGRVLGDVAPGMFLSSLSETVAFFLGTLSTMPAVHTFSLFAGMAVLIDFILQVT
CFVSLLGLDIKRQERNRLDILCCIKSSEETGGVQHSESMLFLFFKNQFSPYLLKDWMRPI
VIAVFVGILSFSAAVMHNVEIGLDQSLSMPDDSYVIDYFSHISKYLHAGPPVYFVLEEGH
NYTSLEGQNMVCGGMGCNNDSLVQQVFNAAEIGSYTRIGYAPSSWIDDYFDWVKPQSSCC
RVYNTTGQFCNASVSDPSCTSCRPLTQEGKQRPQGKDFMTFLPMFLSDNPNPKCGKGGHA
AYNSAVNFINNKTDIGATYFMTYHTVLKTSSDFIDAMRKARIIADNITETMGIKEKNYRV
FPYSVFYVFYEQYLTIVHDAIFNLCISLGSIFLVTTVLLGFEVWAAVVVSITIAMIIVNM
FGVMWLWGISLNAVSLVNLVMSCGIAVEFCSHVTRAFTVSTKGSRVERAEEALSHMGSSV
FSGITLTKFGGIVVLAFSKSQIFKIFYFRMYLAMVVLGATHGLIFLPVLLSYIGPSVNKA
KTRAAQERTRGTERERLLYF
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggggagagctggcatttccctccagcttcttcttcccctccagcttcttctgcccgtg
cgggtacttccacaaaagtgtgtctggtatggagaatgtggagttgcttctggagacaag
aggtacaactgtgcttatgatggaccaccaaaagcactaccagaagatggctatgactta
atgcaggaactctgtccaggtttattctttggcaatgttagcacttgctgtgatgttcat
cagcttcagactttgaaaaatagcttgcagctgcctctgcagtttctctccagatgtcca
tcgtgtttttacaacttgataaacctcttctgtgaactgacttgtagtccaagtcagtct
gactttttgaatgttacaagcaccataccttactatgatcccgttttaaaagagaacaga
agtagcattacagagctggagtactttattggagatcgatttgcaaatgcaatgtacaat
gcctgcagagatgtggaggctccatcaagcaatgttaaagcactggggttgctgtgtggg
aaggatgtcaaggactgcagtgcaaccaactggattgagtacatgttcagtaaagacaat
ggacaaactcctttcagcataattccaatcttttcagatgttcctgtccttggcatgaat
cctatgaataacgctaccaaaggctgtaatgagtccatggatgattcaacaggaccatgc
agctgtcaggactgttcaattgtttgtggtccgaaacctcaaccccctccactgcctcct
ccttggctattgtttggcttggatgctgtgtatgtcatcatgtggatctcctacatgggc
tttcttctcatattttttgcactggtttttggagtctggtgttacaggaggcggcacttt
gtctcggagtacaccccaattgacagcaatgtagccttttctgtgaattcccacggcgac
aatggaaaaattacctgtggtgaaaggcttggtgaaaggtttgagaatggcctgaggatg
acattcacatcatggggggctttctgtgtcagaaatccacgtcctgttatcctcttctct
gtggtcttcattgcaatgtgctgctcaggctttgtatatattaaagcaactacaaatcct
gtagatctctggtcagccccaagcagccaagcccgcaaggagaaggaatactttgacatg
cactttgggcctttcttccgtactgagcaagttattattcaagcaccaaagagccaccca
gagacatactcaccttacccatcaggagatgatgtaccttttgggcctccccttaccaaa
gatattctccatcaggtactggatttgcaggatgctattgtcaacataactgcttcttat
gacaatgagactgtaatgctgaaggacatttgcctggctcctcttgctccctacaacaac
aactgcactatcctgagcgtactcaactactttcagaacagccattctgttctggatcac
actgttggggatgagttctttgtctatgctgattaccacactcacttcttatactgtgtt
cgggctccagcatcactgaatgacacgagcttgcttcacgatccctgcttaggaacgttt
ggtggacctgtatttccatggctggtgttgggaggatatgatgatgataactataataat
gctacagctcttgttattactcttcctgtgaacaactactacaatgactcaaaaaagctg
atgaaagccttggcatgggaaaaagaatttattaactttctgaagagctataataattca
aacttaactatatcattttctgctgaacggagtattgaagatgagatcaaccgtgaaagc
aacagtgatattagcgttgtgttgataagctatcttgtgatgtttgtgtacatctccata
gctttgggacatatccagagctgtagaagactgctggtggattcgaagatctctctgggc
attgcaggcatcctgattgtactgagctcagtagcatgttctataggcattttcagctac
tttggaatccccctgacactgattgtgatagaagtaattcctttcttggtgctggctatt
ggagtggacaacatcttcattatggttcagacacttcagagagatgaacgccttcagggt
gaaactctggatcaacagattggcagagttttgggagatgtggcacctggtatgtttctc
tcatccctttcggagactgtggcattcttccttgggacactgtctacgatgccagcggtt
cacacgttctccctgtttgctggaatggctgtgctcatagactttattcttcaagtcact
tgctttgtgagtctcctgggcttggatattaagcgtcaagagaggaatagactggatatt
ctgtgttgcatcaaaagcagtgaagaaacgggtggagtccagcattctgagagcatgtta
tttctgttcttcaaaaatcagttttctccatatctgcttaaggattggatgagaccaata
gtaatagcagtgtttgtgggtatcctgtcattcagtgctgcagttatgcacaatgtagag
attggactggatcagtctctctcaatgccagatgactcctatgtaatagattacttcagc
cacatcagcaaatatctgcatgcgggtccccctgtctacttcgtcctagaagaaggacac
aactacacttctttggaagggcagaacatggtgtgtggtggaatgggatgtaataatgat
tcacttgtccagcaagtcttcaatgctgcggaaattggtagctacacgaggataggctat
gccccatcgtcctggattgatgactactttgactgggtgaagccacagtcgtcctgttgc
agagtctacaataccactgggcagttttgcaatgcttcagtcagcgatccatcctgcact
agttgtcgaccactgactcaagaaggcaagcagagaccacagggcaaagacttcatgacc
tttttgccaatgttcctgtcggacaaccctaatcctaaatgtggcaaaggaggacatgct
gcctataattctgctgtcaactttataaacaacaaaactgacattggagccacttacttt
atgacttaccatactgtactgaaaacatcatctgattttattgatgctatgaggaaagct
cggattatagcagacaacattactgaaaccatgggcatcaaagagaagaactaccgggtg
tttccttacagtgtgttttatgtcttctatgaacaatacttgacaattgtgcatgatgct
atctttaacctctgcatctccttgggatcaatatttttggtgacaactgtgcttcttggt
tttgaagtatgggctgctgttgtggtttcaataactattgctatgatcatcgtcaacatg
tttggagtgatgtggctctggggcatcagcttgaatgcagtttcattagtaaatcttgtc
atgagctgtggtattgctgtggaattctgcagtcatgtgacaagagcattcactgttagt
accaagggcagtcgagtagagcgtgcagaagaagctctgtctcacatgggcagctcagtt
ttcagtggtatcacactgaccaaatttggaggaattgtagtattggctttttccaaatct
caaatcttcaagatattctacttcaggatgtatctagctatggttgtgctgggagcaaca
catggactgatatttcttccagttctccttagttacataggcccatcagtaaataaagct
aaaactcgtgctgcacaagagaggaccagaggtacagaacgggagagactcctctacttc
tag
DBGET
integrated database retrieval system