KEGG   Corvus brachyrhynchos (American crow): 103618440
Entry
103618440         CDS       T08418                                 
Symbol
NPC1
Name
(RefSeq) Niemann-Pick C1 protein
  KO
K12385  Niemann-Pick C1 protein
Organism
cbrc  Corvus brachyrhynchos (American crow)
Pathway
cbrc03265  Virion - Ebolavirus, Lyssavirus and Morbillivirus
cbrc04142  Lysosome
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
    103618440 (NPC1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    103618440 (NPC1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cbrc02000]
    103618440 (NPC1)
Transporters [BR:cbrc02000]
 Solute carrier family (SLC)
  SLC65: NPC-type cholesterol transporter
   103618440 (NPC1)
SSDB
Motif
Pfam: NPC1_MLD NPC1_N Sterol-sensing Patched MMPL ACR_tran
Other DBs
NCBI-GeneID: 103618440
NCBI-ProteinID: XP_017593739
LinkDB
Position
Unknown
AA seq 1280 aa
MGRAGISLQLLLPLQLLLPVRVLPQKCVWYGECGVASGDKRYNCAYDGPPKALPEDGYDL
MQELCPGLFFGNVSTCCDVHQLQTLKNSLQLPLQFLSRCPSCFYNLINLFCELTCSPSQS
DFLNVTSTIPYYDPVLKENRSSITELEYFIGDRFANAMYNACRDVEAPSSNVKALGLLCG
KDVKDCSATNWIEYMFSKDNGQTPFSIIPIFSDVPVLGMNPMNNATKGCNESMDDSTGPC
SCQDCSIVCGPKPQPPPLPPPWLLFGLDAVYVIMWISYMGFLLIFFALVFGVWCYRRRHF
VSEYTPIDSNVAFSVNSHGDNGKITCGERLGERFENGLRMTFTSWGAFCVRNPRPVILFS
VVFIAMCCSGFVYIKATTNPVDLWSAPSSQARKEKEYFDMHFGPFFRTEQVIIQAPKSHP
ETYSPYPSGDDVPFGPPLTKDILHQVLDLQDAIVNITASYDNETVMLKDICLAPLAPYNN
NCTILSVLNYFQNSHSVLDHTVGDEFFVYADYHTHFLYCVRAPASLNDTSLLHDPCLGTF
GGPVFPWLVLGGYDDDNYNNATALVITLPVNNYYNDSKKLMKALAWEKEFINFLKSYNNS
NLTISFSAERSIEDEINRESNSDISVVLISYLVMFVYISIALGHIQSCRRLLVDSKISLG
IAGILIVLSSVACSIGIFSYFGIPLTLIVIEVIPFLVLAIGVDNIFIMVQTLQRDERLQG
ETLDQQIGRVLGDVAPGMFLSSLSETVAFFLGTLSTMPAVHTFSLFAGMAVLIDFILQVT
CFVSLLGLDIKRQERNRLDILCCIKSSEETGGVQHSESMLFLFFKNQFSPYLLKDWMRPI
VIAVFVGILSFSAAVMHNVEIGLDQSLSMPDDSYVIDYFSHISKYLHAGPPVYFVLEEGH
NYTSLEGQNMVCGGMGCNNDSLVQQVFNAAEIGSYTRIGYAPSSWIDDYFDWVKPQSSCC
RVYNTTGQFCNASVSDPSCTSCRPLTQEGKQRPQGKDFMTFLPMFLSDNPNPKCGKGGHA
AYNSAVNFINNKTDIGATYFMTYHTVLKTSSDFIDAMRKARIIADNITETMGIKEKNYRV
FPYSVFYVFYEQYLTIVHDAIFNLCISLGSIFLVTTVLLGFEVWAAVVVSITIAMIIVNM
FGVMWLWGISLNAVSLVNLVMSCGIAVEFCSHVTRAFTVSTKGSRVERAEEALSHMGSSV
FSGITLTKFGGIVVLAFSKSQIFKIFYFRMYLAMVVLGATHGLIFLPVLLSYIGPSVNKA
KTRAAQERTRGTERERLLYF
NT seq 3843 nt   +upstreamnt  +downstreamnt
atggggagagctggcatttccctccagcttcttcttcccctccagcttcttctgcccgtg
cgggtacttccacaaaagtgtgtctggtatggagaatgtggagttgcttctggagacaag
aggtacaactgtgcttatgatggaccaccaaaagcactaccagaagatggctatgactta
atgcaggaactctgtccaggtttattctttggcaatgttagcacttgctgtgatgttcat
cagcttcagactttgaaaaatagcttgcagctgcctctgcagtttctctccagatgtcca
tcgtgtttttacaacttgataaacctcttctgtgaactgacttgtagtccaagtcagtct
gactttttgaatgttacaagcaccataccttactatgatcccgttttaaaagagaacaga
agtagcattacagagctggagtactttattggagatcgatttgcaaatgcaatgtacaat
gcctgcagagatgtggaggctccatcaagcaatgttaaagcactggggttgctgtgtggg
aaggatgtcaaggactgcagtgcaaccaactggattgagtacatgttcagtaaagacaat
ggacaaactcctttcagcataattccaatcttttcagatgttcctgtccttggcatgaat
cctatgaataacgctaccaaaggctgtaatgagtccatggatgattcaacaggaccatgc
agctgtcaggactgttcaattgtttgtggtccgaaacctcaaccccctccactgcctcct
ccttggctattgtttggcttggatgctgtgtatgtcatcatgtggatctcctacatgggc
tttcttctcatattttttgcactggtttttggagtctggtgttacaggaggcggcacttt
gtctcggagtacaccccaattgacagcaatgtagccttttctgtgaattcccacggcgac
aatggaaaaattacctgtggtgaaaggcttggtgaaaggtttgagaatggcctgaggatg
acattcacatcatggggggctttctgtgtcagaaatccacgtcctgttatcctcttctct
gtggtcttcattgcaatgtgctgctcaggctttgtatatattaaagcaactacaaatcct
gtagatctctggtcagccccaagcagccaagcccgcaaggagaaggaatactttgacatg
cactttgggcctttcttccgtactgagcaagttattattcaagcaccaaagagccaccca
gagacatactcaccttacccatcaggagatgatgtaccttttgggcctccccttaccaaa
gatattctccatcaggtactggatttgcaggatgctattgtcaacataactgcttcttat
gacaatgagactgtaatgctgaaggacatttgcctggctcctcttgctccctacaacaac
aactgcactatcctgagcgtactcaactactttcagaacagccattctgttctggatcac
actgttggggatgagttctttgtctatgctgattaccacactcacttcttatactgtgtt
cgggctccagcatcactgaatgacacgagcttgcttcacgatccctgcttaggaacgttt
ggtggacctgtatttccatggctggtgttgggaggatatgatgatgataactataataat
gctacagctcttgttattactcttcctgtgaacaactactacaatgactcaaaaaagctg
atgaaagccttggcatgggaaaaagaatttattaactttctgaagagctataataattca
aacttaactatatcattttctgctgaacggagtattgaagatgagatcaaccgtgaaagc
aacagtgatattagcgttgtgttgataagctatcttgtgatgtttgtgtacatctccata
gctttgggacatatccagagctgtagaagactgctggtggattcgaagatctctctgggc
attgcaggcatcctgattgtactgagctcagtagcatgttctataggcattttcagctac
tttggaatccccctgacactgattgtgatagaagtaattcctttcttggtgctggctatt
ggagtggacaacatcttcattatggttcagacacttcagagagatgaacgccttcagggt
gaaactctggatcaacagattggcagagttttgggagatgtggcacctggtatgtttctc
tcatccctttcggagactgtggcattcttccttgggacactgtctacgatgccagcggtt
cacacgttctccctgtttgctggaatggctgtgctcatagactttattcttcaagtcact
tgctttgtgagtctcctgggcttggatattaagcgtcaagagaggaatagactggatatt
ctgtgttgcatcaaaagcagtgaagaaacgggtggagtccagcattctgagagcatgtta
tttctgttcttcaaaaatcagttttctccatatctgcttaaggattggatgagaccaata
gtaatagcagtgtttgtgggtatcctgtcattcagtgctgcagttatgcacaatgtagag
attggactggatcagtctctctcaatgccagatgactcctatgtaatagattacttcagc
cacatcagcaaatatctgcatgcgggtccccctgtctacttcgtcctagaagaaggacac
aactacacttctttggaagggcagaacatggtgtgtggtggaatgggatgtaataatgat
tcacttgtccagcaagtcttcaatgctgcggaaattggtagctacacgaggataggctat
gccccatcgtcctggattgatgactactttgactgggtgaagccacagtcgtcctgttgc
agagtctacaataccactgggcagttttgcaatgcttcagtcagcgatccatcctgcact
agttgtcgaccactgactcaagaaggcaagcagagaccacagggcaaagacttcatgacc
tttttgccaatgttcctgtcggacaaccctaatcctaaatgtggcaaaggaggacatgct
gcctataattctgctgtcaactttataaacaacaaaactgacattggagccacttacttt
atgacttaccatactgtactgaaaacatcatctgattttattgatgctatgaggaaagct
cggattatagcagacaacattactgaaaccatgggcatcaaagagaagaactaccgggtg
tttccttacagtgtgttttatgtcttctatgaacaatacttgacaattgtgcatgatgct
atctttaacctctgcatctccttgggatcaatatttttggtgacaactgtgcttcttggt
tttgaagtatgggctgctgttgtggtttcaataactattgctatgatcatcgtcaacatg
tttggagtgatgtggctctggggcatcagcttgaatgcagtttcattagtaaatcttgtc
atgagctgtggtattgctgtggaattctgcagtcatgtgacaagagcattcactgttagt
accaagggcagtcgagtagagcgtgcagaagaagctctgtctcacatgggcagctcagtt
ttcagtggtatcacactgaccaaatttggaggaattgtagtattggctttttccaaatct
caaatcttcaagatattctacttcaggatgtatctagctatggttgtgctgggagcaaca
catggactgatatttcttccagttctccttagttacataggcccatcagtaaataaagct
aaaactcgtgctgcacaagagaggaccagaggtacagaacgggagagactcctctacttc
tag

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