Corvus brachyrhynchos (American crow): 103618533
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Entry
103618533 CDS
T08418
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04140
Autophagy - animal
cbrc04148
Efferocytosis
cbrc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103618533 (VPS11)
04148 Efferocytosis
103618533 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103618533 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbrc04131
]
103618533 (VPS11)
Membrane trafficking [BR:
cbrc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103618533 (VPS11)
Hops complex
103618533 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
TPR_GEMI5
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
zf-C3HC4_3
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
103618533
NCBI-ProteinID:
XP_008635177
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MCLNCDLNMEGQIWFLPRSLQLSSFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKV
WNLEKRDGGNPLCTRIFPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDR
HSKTQLLHEGSYPVTGLAFRQSGKTTHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRC
SSLSDPSQDLQFIVAGNECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKERKTSPK
SEFAGNEAQNSDKQVLNIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEK
DTQTKLEMLFRKNLFEMAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTI
GKLEPSYVIRKFLDAQRIHNLTAYLQMLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIK
TSESEVHFDVETAIKVLRQAGYYSHAVYLAEKHEHHEWYLKIQLEDIKNYQEALHYIGKL
PFEQAESNMKRYGKILMHHVPNETTELLKVLCTDYRPSGGNEGPGMLEGKKANSEEFIPV
FANNSRELKAFLEHMTEVQADSPQGVYDTLLELRLQNWAHEQDEQIKEKLHNEALTLLKS
GRFKTVFDKALVLCQMHSFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQE
ACLWEQALGYFARKEENCKEFIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLV
NKLQKQSRQIEQDEQRIQKYREETMRIRLEIEELKASPKIFQKTKCSICTSALELPSVHF
LCGHSFHQHCFESYSESDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFS
VVADYFGRGVFNKLTLITDLPSGKTATTIEAGLQRELLIHTKRST
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgtgccttaactgtgatctaaatatggaaggtcagatttggtttttgcctcgttccctt
caactcagcagtttccaagcttacaagctaagggtcacacatctgtaccagctgaagcag
cacagtatcctggtttctgttggtgaggatgaagaaggtattaatcctttggtgaaagtc
tggaacctggagaaacgagatggcggtaatcctctttgcacacgaatttttccagcaata
ccaggtaacaagcccacggttgtatcctgcctaactgtccacgagaatcttaatttcatg
gctatcggttttgcagatggaagcgttgtactcactaaaggagacatcactcgagatcgg
catagcaagacccagctcctacatgaaggcagttacccggttactggccttgcttttcga
cagtctggcaaaacaacacatctgtttgtggtgaccaccgagaatatccagtcttatatg
ctttcagtgaaagactatcctcacctggagctggacactcacggttgtggattgcgctgt
tcatctctcagtgacccctcccaggatctccagttcattgtggcaggaaatgaatgtgtg
tacctttatcaaccagacgaacgtggcccctgctttgccttcgagggacaaaagctgatt
gttcactggtatcgggggtacctcatcattgtctccaaggagcgaaagacttccccaaag
tcagaatttgctgggaacgaggcacagaattcagacaaacaagtcctgaatatctatgac
ttgtgcaacaaattcattgcatacagctcaatctttgatgatatagtggatgtcttggca
gagtggggttctctgtatgtactgaccagagatgggaagatccatgtactgcaggagaag
gatacacaaaccaaactcgagatgctgttcagaaagaacttatttgaaatggccattaac
ctggccaagagccaccacttggacagcgatggtttgtcagagattttccggcagtatggc
gatcatctctataacaagggaaaccacgatggagccatccagcagtatatccgaactata
gggaagctagaaccatcttacgttattcggaaattcctggatgctcagcgtatccacaac
ctcactgcttatctacagatgctccatctgcagtccctggccaatgcagatcatactaca
cttctgctgaattgctataccaaactcaaagacagctccaaactggaagagttcattaag
acaagtgagagtgaggtccactttgatgtggaaacggctatcaaggtgcttcgccaagct
ggttactactcccacgccgtgtacctggcagagaagcacgagcatcatgaatggtacctc
aaaatccagttagaggacatcaagaactaccaagaggctttgcactacattggaaaactg
ccctttgaacaggcagagagtaacatgaagcggtatggtaaaatcctgatgcaccatgtc
cctaatgagaccactgaattgctgaaggtcctttgcactgattaccggccctcgggaggt
aatgaaggccctgggatgctggaaggaaaaaaggctaattcagaggagttcatcccagtc
tttgcaaacaactcccgagaactgaaagcttttctggagcacatgactgaagtgcaggct
gactctccacagggtgtctatgacactttactggaacttcgattgcagaactgggcacat
gaacaagatgagcagatcaaggagaagttgcacaatgaagccctcaccctcctgaagagt
ggaaggttcaaaacagtctttgataaggccttggtcttatgtcagatgcacagtttcaag
gatggtgttctgtacctctatgagcagggcaaacttttccaacagatcatgcactaccac
atgcagaatgagcagtacaagaaggtgatcgaggtgtgtgagctgtatggagaccaagag
gcttgtctctgggaacaggctcttggctactttgcgcggaaggaggagaactgcaaagag
tttattgctgcagtgctgaaacacatcgagaacaagaatcttatgcctccactgcttgtt
gtgcagacgctggctcataactccacagccaccctgtctgtgattaaggattatcttgtc
aacaagctgcagaagcaaagccgccagatagagcaggatgagcagagaattcagaaatat
cgagaagaaactatgaggatccgcctggaaattgaagagctaaaagcaagtcccaagatt
tttcagaagaccaagtgtagcatttgcaccagtgcattggagctgccttcagtccacttc
ctgtgcggtcattcctttcaccagcactgctttgaaagctactctgagagtgattcggaa
tgtcctacttgcatgccagaaaaccgcaaagtgatggacatgatccgagcccaggagcag
aagagagatctgcacgaccagtttcagcatcagctcaagtgttcaaacgatggcttctca
gtcgttgctgactactttggtcgcggcgtcttcaataagctcaccctgatcacggacttg
ccctcgggaaagacagctacgaccatcgaggctggcctgcagcgggagctgctcatccac
accaagcgcagtacctga
DBGET
integrated database retrieval system
