Corvus brachyrhynchos (American crow): 103618578
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Entry
103618578 CDS
T08418
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04270
Vascular smooth muscle contraction
cbrc04625
C-type lectin receptor signaling pathway
cbrc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
103618578 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
103618578 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
103618578 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbrc04131
]
103618578 (ARHGEF12)
Membrane trafficking [BR:
cbrc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
103618578 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
103618578
NCBI-ProteinID:
XP_017593962
LinkDB
All DBs
Position
Unknown
AA seq
1538 aa
AA seq
DB search
MSGTQSTITDRFPLKKPSRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
ESRSETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSDVDLAAFGHMSPIMTSPHSP
GTSGNAERITSPVLMGEENNIVHNQKVEILRKMLQKEQERLQFLQEEYGRTSSTRLLKEI
QEAKKHIPQLQEQLSKATGCSQDGVLSSRSGSESLQISEGEAESGDSGSKLDFSGDSPSR
PNSDIADSPRSGLKERIYPDESPEKAELQDTDSQSSVGSPLSRVGTQIIGAEDDDFDTEQ
EQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYTDLYKQTNSKETRRVF
LEFYQFFLDRAANLKVPVPDEISLELDRRRPELLPEELHRQFIQTMQDKVCPEVQRNLED
FRQKRSMGLTLAEGELTRLDAERLRDRNAVEKERSCAEQIIAKIEEVLMSSQPLEEDKSS
TMQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEKEGEEKGKRRGFPNILG
PPRRPSRHDSSAIGRAMEMQKPRHPKHSPTASSVSPEPPEASKLRQSGSSSDGTDAPYPP
ANPMSPLAVGPFASPEGSKDSDTGLKQPGEAPPAGDSMDGTPRTPNNTFEFPSPLENLQE
EEGESERMVDMGTPKPFRKMDSVGFADVQSEDELYDFDMDMDPPNWQQLVSREVLMGLKP
YEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILSSSDKRKIFSNLEDILGLHV
ALNDQMKAVRKRNETSVIGQIGEDLLSWFSGAAEEKLKLATATFCSNQPFALEVIKSRQK
KDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELPEEKEKVKKA
ADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLHE
GPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKLN
TVLVRQVATDNKAFFVISMSEKGAHIYELVAQTVSEKNVWQDLIAQMAGTVKMGSSRRVI
PLPQSGPGEEEREEEEQQKLKEQHDIPASSLQSPDKDLGLESPLILNPQSSSPIMSEKAK
VEGLLGAEGQFEKVQQAELALKDSSACYEHTATSSASVPEGQWARDALRNLGLLRQLLVQ
QLGLAEKGTLEDRQRLPRFRTVSQEAQTESGNDLQPSDSRFQQPGADRTLPRTREPAAGH
GPRTAAECPASGDAMQLVGTEPGARGSLPMDSMNLEGSGSELEGLGAEESGEHFFDAREA
HSDENPAESELLDRKEDEEVQIRISGNYLILDGYGTVQESSTDEEVSALVLQCTSHSRPS
LDSAQQQQPLSPRDTQSDGGSSPFPEELLGSRWAGLEEPCPFLGSPQLPLETRVQLMQYI
QNIEDALEKLKEVEEDYSILRRQGLAGSASTGEPSDKS
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccacaatcacggacaggtttcctctcaaaaaaccttcgagacat
ggcagcattctgagcagagagtctccagctgacaagaagcagaaggttgaacgctgcagc
agcacccacgactttgatcccacagatagctcctccaagaagacaaagtctagttctgag
gagagtagatccgagacgtatggcctggtgcagaggtgtgtggtgatccagcgggatgag
aacggctttgggctgacggtcagcggggacaaccccgtcttcgtgcagtccgtcaaggaa
gatggagcagccatgcgggctggagtgcagacgggtgatagaattatcaaggtgaacggg
actctcgtaacacactcgaaccatttggaggtggtcaagctgatcaagtcgggttcctat
gtagctctcactgtccaggggcgccctccagggtcgccccagattcccttggcggattcc
gacgtggatctggcagcttttgggcatatgtctcccatcatgacatccccccactcgcct
ggcacgtcagggaatgcagaaaggatcaccagcccagtgctcatgggggaggaaaataac
attgtccacaaccagaaggtggagattctgaggaagatgctccagaaggagcaggagagg
ctgcagttcctccaggaggagtatggccgaacctcctccacccgcctgctcaaggagatc
caggaggcaaagaaacacattcctcagctgcaggagcagctgtccaaggccacgggctgc
tctcaggatggagtcttgtcctccaggtctgggtcggagtcgctgcagatcagtgagggg
gaggcagagagtggggacagtggcagcaaactggatttcagtggtgacagcccctccaga
cccaacagtgacattgctgatagtcctcgcagtggcctgaaggagaggatttatccagat
gagagcccagaaaaggctgagcttcaagatactgactcccagtccagtgttggaagcccc
ttgtcccgagtgggcactcagatcattggagcagaggatgatgattttgacacggagcag
gagcagatcaatgggcagtgcagctgcttccagaacatcgagctcctgaaatcccgccca
gctcacctggctgttctcctgcaccacgtggtgtcccagtttgatcctgcagccctgctg
tgctacctttacacagacctgtacaaacagaccaactccaaagagacccggcgtgttttc
ctggagttttaccagtttttcctggacagagctgcaaacctgaaagtcccagttccagat
gaaatctccttggaattagacaggagaaggccagaactgctccctgaggagctccaccgc
cagttcatccaaaccatgcaggacaaagtctgtccagaggttcagaggaacctggaggat
ttcaggcagaaacgcagcatggggctgaccctggccgagggggagctgaccaggctggac
gcggagcggctgcgggaccgcaacgccgtggagaaggagaggagctgtgcagagcagatc
attgccaagatcgaggaagtcctgatgtcatctcagcctctggaagaagacaagagctcc
acaatgcagtatgtgatcctcacctacatgaaacacctgggagtcaaagtcaaagagcct
cggaacctggagcagaagcgtggccggattggtttcctgccgaagatcaagcaaagcatc
aagaaggagaaagaaggagaggagaaaggaaagaggagaggcttccccaacattctgggc
cccccaaggagaccgagccgacacgacagcagtgcaattggcagggccatggagatgcag
aagcccaggcaccccaagcactcgcccacagcctcttctgtgagcccagagcccccagag
gccagcaagctgcgccagagtggctcctccagcgatggcaccgatgctccctacccccct
gccaaccccatgtccccgctggcagtggggccctttgcctctccggagggcagcaaggac
agtgacacaggtttgaagcagcctggggaagccccacctgccggtgactccatggatggc
actccccgcacacccaacaacaccttcgagttcccgtcccctttggaaaacctgcaggag
gaggagggagaatcagagaggatggttgacatgggaacaccaaagcctttccgcaagatg
gacagtgttggctttgcagatgtgcagagtgaggatgagctctatgacttcgacatggat
atggatcctcccaactggcagcagcttgtgagcagggaggtgctgatggggctcaaaccc
tacgaaatcaagcgtcaagaagtgataaatgagctgttctacacggagcgagcccacgta
cgcacgctcaaagtcctgcacaacgtcttctaccagagggtcaccagggagggcatcctc
agctccagtgacaagcggaaaatcttctccaacctggaggatatccttgggctgcatgtt
gcactgaacgatcagatgaaagctgtccggaaaaggaacgaaacttctgtcattggccaa
attggggaagatttgctctcctggttcagtggagcagcagaggagaagctgaaacttgcc
actgccaccttctgcagcaaccagcccttcgctctcgaggtcatcaagtcccgccagaag
aaggactcacgcttccagaccttcgtgcaggatgctgagagcaatcctctgtgccggcgg
ctgcagctgaaggatatcatccccacggagatgcagaggttgactaaatacccccttctg
ctggataacattgctaaatacacagagctgcctgaggagaaggagaaagttaagaaagca
gcagatcactgtcgccagatcctcaaccacgtgaaccaggctgtcaaagagtctgagaac
aagcagcatttggaggattatcagcggcgactcgacctgtcctacttgaagcagtcagag
gaccccatgatggatgagttcaggaacctggatctaacaaagaggaaaatgctccatgaa
gggcccctgacttggaaggtgaatcgtgacaaaaccatcgatctgtacactctgctgctg
gaggacatcctggtgctgctgcagaagcaagatgacaaactggtgctgaagtgccacagc
aagatcctggcgtccacagctgacagcaaacacaccttcagccccatcatcaaactcaac
actgtgctggttcgccaggtggccacagataacaaagctttcttcgtcatctccatgtca
gagaagggggctcacatctacgagctggtggcacagactgtctcagagaagaatgtctgg
caggaccttatagctcagatggcaggaactgtgaagatggggagcagcagaagagtgatc
ccattgcctcagtcaggccctggcgaagaggagcgtgaagaagaggagcagcagaagctc
aaagagcagcatgacattcctgccagcagcctgcagagtccagataaagatttgggcctg
gagtctcccttaatactgaaccctcagtcttcttcacccatcatgtctgaaaaggccaag
gtggaagggctgctgggggccgagggacagtttgagaaggtgcagcaggcagagctggca
ctgaaagactcctctgcctgctatgaacacacagccaccagctcagcctcggtgccagag
gggcagtgggcacgggatgctctgaggaacttggggttgctgaggcagctcttggtgcag
cagctcggcctggctgagaaggggaccctggaggacagacaacgcttgcccaggttcagg
accgtgtcccaggaagcccagacagagagtgggaatgatctgcagccctctgacagcaga
ttccagcagcctggagcggacagaacccttcccagaactcgagagcccgcggctgggcac
ggcccccggactgcagctgagtgcccggcctcaggggatgccatgcagctggtgggcaca
gagcccggtgccaggggcagtttgcccatggacagcatgaacctggagggctctggctcg
gagctggaggggctgggggccgaggagagcggggagcatttcttcgatgctcgggaagcc
cacagcgacgagaaccccgcggagagcgagctgctggacaggaaggaggacgaggaggtg
caaattcggatctcaggaaattatttgatccttgatggatatggaacagtgcaggagagc
tccacggacgaggaggtgtcagccctggtcctgcagtgcacctcccacagccggccctcc
ctggacagtgcccagcagcagcagcccctgtccccaagggacacccagtcggacgggggc
agctccccgttccccgaggagctgctgggctcgcgctgggcagggctggaggagccctgc
cccttcctgggcagccctcagctccctctggagacccgtgtgcagctcatgcagtacatc
cagaacatcgaggatgccctggagaagctaaaggaggtggaggaggactacagcattctg
cgacgccaggggctggctggctcagcctccacaggagagccctcagacaaaagctag
DBGET
integrated database retrieval system
