Corvus brachyrhynchos (American crow): 103618743
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Entry
103618743 CDS
T08418
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103618743 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrc03019
]
103618743 (DROSHA)
03009 Ribosome biogenesis [BR:
cbrc03009
]
103618743 (DROSHA)
03036 Chromosome and associated proteins [BR:
cbrc03036
]
103618743 (DROSHA)
Enzymes [BR:
cbrc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
103618743 (DROSHA)
Messenger RNA biogenesis [BR:
cbrc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
103618743 (DROSHA)
Ribosome biogenesis [BR:
cbrc03009
]
Eukaryotic type
90S particles
RNase
103618743 (DROSHA)
Prokaryotic type
rRNA processing factors
103618743 (DROSHA)
Chromosome and associated proteins [BR:
cbrc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
103618743 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
YcaO
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
103618743
NCBI-ProteinID:
XP_008635399
LinkDB
All DBs
Position
Unknown
AA seq
1336 aa
AA seq
DB search
MSFHSGRGCPRGQGGPGARTSSQTYRPQNLRQLHPQQPSVQYQYEQQTAPPTTYSNPPTT
GYMPPRPDFVPYPPPVPPSTQNPISQCPMRPPFPNHQMRQSFPVPPCFPPTPPPVPNPSN
TPVPGTPAGQSTFPYMMPPPTVPHPPPPPVMPQQVSYQPVYSAGYSQQSFPPPSFSSYQH
TSGSFPSSTASSSASSSHFRHTGQYQGEKSQSDRRSPDRSKHYDEHRHREHGHMHGDRHR
STNHGDRRERGRSPDRRRQESSRHRTDYDRGRISPHHRSYERNRERERERHRHRDSRRSP
SPDRSYKKDYKRAGSRSPSRERKRTRWEEDRERWSENQNSSKEKNHTAVKDKESEENASE
KNEEEDEELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSKLRDLYEKFDEELGKRQAK
AKAARPPWEPPKTKLDEDLESSSESECDSEDDSSCSSSSDSDVIDVIAEIKRKKAHPDRL
HEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLYHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVRGLELFSSYLFKDILELYDWNLKGPSLENDSVSCPRYHFMPRFVRFLPDGGKEVLS
MHQILLYLLRCSKALVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLD
REQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKL
SQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHVRYHQCLMH
LDKLIGYTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHIHMR
KKGINTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYYLFPTLEEGGLAT
YRTAIVQNQHLAMLAKKLELERFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLE
EAKQLFGRLLFNEKDLRDVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGVIF
THVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLR
SSLVNNRTQAKVAEELGMQEFAITNDKTKRPVTLRTKTLADLLESFIAALYIDKDLEYVH
TFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTY
TVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKELRWE
REHQEREPEETEEARK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattctgggcgaggatgtccccgtggccaggggggaccaggagcaagaact
tcgtcacagacctaccgccctcagaacctccgtcagcttcacccacagcagccctctgta
cagtaccagtatgagcagcaaactgcccctccaacaacctattccaaccctccaaccacc
ggttacatgcctcccaggccagactttgtgccctatcctcctccagtgcccccttccaca
caaaatcccatcagccagtgtcccatgaggccgccatttccaaaccaccagatgaggcag
agcttcccagtacctccatgtttccctcccactcctccaccagtgccaaatcctagcaac
actcccgtgccaggaacacctgctggacaaagcaccttcccttacatgatgcctcccccc
acagtaccgcaccctccccccccgccagtcatgccccagcaggtcagctaccagcctgtg
tactctgcagggtactcgcagcagtcgttcccaccgcccagcttcagcagctaccagcac
acctccggctccttcccgagcagcactgccagcagcagtgccagcagcagccacttccgg
cacacggggcagtaccagggagagaagtcccaaagtgatcggcggtccccagacaggagc
aagcactatgatgagcaccggcaccgcgagcatggtcacatgcatggcgacaggcatcgc
tccactaaccacggggatcgtcgggagcgcggccgcagtccggatagaaggaggcaggaa
agcagtcggcaccggacagattatgacagaggaaggatatcgcctcatcacagaagttac
gagcgaaacagggaacgggagagggagaggcataggcaccgtgacagcagaagatcacca
tcaccagacagatcctacaaaaaggattacaagagagcaggaagccggtctccaagcaga
gagagaaagagaacccgatgggaggaggacagagaaaggtggtctgagaaccagaactcc
agcaaagagaaaaatcatactgctgtcaaagacaaagaatcagaagagaatgcatctgaa
aaaaatgaagaggaagatgaggaattgcttaagccagtctgggttcgctgtacccattct
gaaagctattattccaatgaccccatggatcaagtgggggattctactgtggtaggaaca
agcaagctccgagatctgtatgaaaagtttgatgaggagttaggaaagcgacaggcaaag
gccaaagcagccaggccaccatgggagccaccgaaaaccaagctggatgaagatttagag
agctccagtgagtcagagtgtgactctgaagatgacagcagctgctccagcagttcagat
tcagatgttattgacgtcattgcagaaattaagcgtaaaaaagcacaccctgatcgtctc
catgaagaactgtggtacaatgatccaggacagatgaatgatggacctttgtgcaagtgc
agtgctaaagcccggcgaacgggaataagacatggcatttatcctggcgaagagcccatt
aaaccatgtcgccccatgaccaacaatgctggaagactgtaccactatcgaattactgtg
tcacctcccacaaatttcttaacagacagacctactgttattgagtatgatgaccatgaa
tatatctttgaagggttctccatgtttgcacatgccccactaacaaatattcctctatgc
aaagtaatcaggtttaacattgactataccattcatttcattgaggagatgatgcctgag
aatttttgtgtgagaggccttgagctgttttcttcatatctattcaaagatattttggag
ttgtatgactggaatcttaaaggtccttcacttgaaaatgattctgtttcctgtcccaga
tatcacttcatgccgcggtttgtgagatttcttccagatggaggaaaagaagtactctca
atgcatcagattcttctctacttgttacgatgcagtaaagctttggtgcctgaagaggag
attgccaacatgcttcagtgggaagaactggaatggcagaaatacgcagaagaatgcaaa
gggatgatcgttaccagccctggaatgaaaccaagctcagttcgtattgatcaactggac
cgcgaacaattcaatcctgatgtaattactttccctattattgtgcactttgggatacga
cctgctcaactcagttatgctggagatcctcagtaccaaaagctgtggaagagttacgtg
aagctgcgtcacctgctggctaatagtcccaaagtcaaacaggctgataaacagaaatta
tcacaaagagaggaagcactgcagaaaattcgtcagaagaacacaatgaggcgtgaagtg
acagtggagttgagcagccaggggttctggaaaacggggatacgctctgacgtctgccag
cacgcaatgatgcttcctgtcctcacccaccatgtccgctaccatcagtgtctgatgcac
ttggacaagttgataggctacacttttcgagataggtgcttgctgcagcttgccatgact
cacccaagccatcatctaaattttgggatgaatccggatcatgccagaaattccttatcc
aactgtgggattcgacagcccaagtatggagatagaaaagtccaccatatacacatgaga
aagaaagggataaacaccctgataaatattatgtcccgtttgggacaggatgatccagct
ccttccaggattaaccacaatgagcgtttagaatttctgggagatgctgtggtggagttc
ttaacaagtgtccacttatactacctgtttcccactctggaggaaggaggattagctacg
taccgcactgccatcgtacagaaccaacacctggccatgctggctaagaagctggaacta
gaacgattcatgctttatgctcatggtccagacctttgcagggagtcagatctccgtcat
gccatggccaactgctttgaagccctcataggagctgtttatctagagggaagcctagaa
gaagcaaaacaattatttggacgtttgctcttcaatgaaaaggacctgcgggatgtatgg
cttaattatccactacatccactccaactgcaggagtccaatactgacaggcaactcatt
gagacctctccagttcttcaaaagcttacggagtttgaggaggcaattggagtcatcttt
actcatgttcggcttctagcacgtgcgttcactctgagaacagtgggctttaaccatttg
actctaggccacaaccagaggatggaattcctaggtgactccataatgcagttggtagcc
acagagtatttattcatacatttccccgatcatcatgaggggcacttaacgctgttgaga
agttctttggtgaacaacaggacacaggccaaggtggcagaagagctgggtatgcaagag
tttgccatcactaatgacaagactaaaagacctgtaactcttcgaactaagactttggct
gatctcttggaatcctttattgctgccctgtacattgataaagatttggaatacgttcac
actttcatgaatgtttgcttttttccacggctaaaggagtttattttaaatcaagattgg
aatgatcctaaatctcagcttcagcagtgctgcttgactctcaggacagaaggaaaagag
ccggacattcctctttacaagaccttgcagacagtgggaccttctcatgccaggacatac
acagtagctgtttacttcaaaggggaaagaataggatgtggtaaagggccaagtattcag
caagcagaaatgggagctgcaatggacgcacttgaaaaatataactttccccagatggcc
catcagaaacggttcattgaacggaagtacagacaggagttgaaagaattgaggtgggaa
agagagcatcaagagagagagccagaggagactgaagaagcaaggaaataa
DBGET
integrated database retrieval system
