Corvus brachyrhynchos (American crow): 103618978
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Entry
103618978 CDS
T08418
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7 isoform X1
KO
K12597
protein AIR1/2
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103618978 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrc03019
]
103618978 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
cbrc03016
]
103618978 (ZCCHC7)
Messenger RNA biogenesis [BR:
cbrc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
103618978 (ZCCHC7)
Transfer RNA biogenesis [BR:
cbrc03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
103618978 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
zf-CCHC_3
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
103618978
NCBI-ProteinID:
XP_008635673
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MFAGYDGSENTEVYEDELYPEESSSEQSVDSEVEFHLYSQIHYSQDLGEISTLEMDEEAG
VAEVMGHSSGLTEKQDEDEKLTEFTGGGTQLSDEPEIIILSDTPDEDSIYKSKAKRSRCS
STQGKTHIHMVSSTPNHTKAAGCNVLCPPESDVGTPRQRNSTSGRPTPVCSAGPQAIHDV
LVIDNSSEEESLISDSDNVESWMLLGAGADDKDGDIMLNLEGCATPVSEGEMDVDWSISH
KDLEARISNYTGMRHSSMRYYKNVTCRNCDRPGHLSKNCPTPKKVPPCCLCAGRDHLQHS
CPARFCLNCCLPGHYFRECLERAYWNKHCNRCDMKGHYADACPEIWRQYHLTTKPGPIKA
AGSQSERSVAVYCYNCSRKGHFGYECSEKRMQGNMFPSSPFVYYYDDECDIKRRANRLKR
KVADLQEAGLLPEQSETPLQEEQPEVHSHKKKSKLWKEQRGKNSKNSEQQKKMKVSRAKK
PQEEKHRRGVEIRCEPKEDFPRGYKQQVCKGSRVRHKSLFQAFSGSKAMCVQQPLEGAKR
KKKWKKQKNASPDSRDNLFLIKQRKKKSKQKSW
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccgggtatgatggttctgagaatactgaagtatatgaagatgagctatatcct
gaggagtcatccagtgagcagagtgttgatagtgaggtggagtttcatctctatagccag
atccactattcccaggatcttggagaaatcagtacactggaaatggatgaagaagctggt
gttgcagaagtcatgggtcatagttcaggtctaactgagaaacaggatgaagatgagaag
ctcactgaattcactggtggtggtactcaactttcagatgagcccgagatcatcatcctg
tctgatacaccagatgaagacagcatctacaaaagcaaggcaaagaggtcaagatgctct
tcaactcaaggtaaaacacacatccacatggtatcctccacaccaaatcacaccaaagct
gctggatgtaatgtcctgtgtccccctgaatcagatgtgggcacaccaaggcagagaaac
agcactagtgggaggcctacccctgtctgttctgctggacctcaagccatccatgatgtg
ttggtaatagacaacagctcggaggaggagagcttgatctctgacagtgataacgtcgaa
agctggatgcttttgggagctggcgctgatgacaaggatggagacatcatgttgaacctt
gagggctgtgccactcctgtcagtgaaggagaaatggatgtggactggtccatctctcat
aaagacttagaggcacggatctccaactacacgggtatgaggcacagcagcatgcggtac
tacaaaaacgttacttgtaggaactgcgacaggccaggacatttgtccaagaactgtccc
actccaaagaaagttcccccttgttgcctgtgtgcaggaagagaccatctacagcacagc
tgcccagcacgtttctgtctgaactgctgtttgcctgggcactatttcagggaatgccta
gagagagcctattggaacaaacactgcaaccgctgcgacatgaagggccactatgctgat
gcttgcccagaaatatggaggcagtatcacctaacaacaaagccaggacccatcaaggca
gctggttcccagtcggagcgctctgtggccgtgtactgctacaactgttcccgcaaagga
cacttcggatacgagtgctcagagaagcggatgcagggaaacatgttccccagctctccc
ttcgtctactactacgatgatgaatgcgatatcaagaggagagcaaacaggttaaaaagg
aaggtggcagacctgcaggaagctggccttctgccggaacagtctgaaacaccgttgcag
gaagaacagcctgaggtgcacagccacaagaaaaagagcaaactttggaaagaacaacgt
gggaagaacagcaagaacagtgaacagcaaaagaagatgaaggtgtcccgggcaaagaaa
ccccaagaggagaagcacaggaggggtgttgaaatccgctgcgaaccgaaggaggacttc
cctcgggggtacaagcagcaggtgtgcaagggcagcagggtccgccacaagtcccttttc
caggcattctcaggcagcaaagccatgtgtgtgcagcagcctctggaaggtgccaaaagg
aagaagaaatggaaaaagcagaaaaatgctagtcctgacagcagggacaatctattcctt
ataaaacagcggaagaagaagtccaaacagaagtcctggtga
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