KEGG   Corvus brachyrhynchos (American crow): 103619099
Entry
103619099         CDS       T08418                                 
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
cbrc  Corvus brachyrhynchos (American crow)
Pathway
cbrc04622  RIG-I-like receptor signaling pathway
cbrc05164  Influenza A
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    103619099
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    103619099
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cbrc04121]
    103619099
Enzymes [BR:cbrc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103619099
Ubiquitin system [BR:cbrc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    103619099
SSDB
Motif
Pfam: SPRY PRY zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 ANCHR-like_BBOX zf-RING_2 zf-RING_5 zf-B_box RING_XB3-XBAT31 zf-RING_4 AHH
Other DBs
NCBI-GeneID: 103619099
NCBI-ProteinID: XP_017594639
LinkDB
Position
Unknown
AA seq 630 aa
MAALESESGLSGLEEELTCSICLCLFSTPVTGPCGHNFCASCLELTWAGLSGGFSCPQCR
ATFAGRPQLQKNTVLCRVVEQLQGHAGAKGEEEGQEEGEPAGCWAGEPPVSCDSCREAPA
VQTCLTCTASFCAEHLRPHRDSPAFRDHQLCPPLRDLQQRKCPQHNRLFEFFCSKHGVCI
CSLCLLGHKLCPTSPLEQAKAAAQSVLKKKLVELHSQSERTARAMSTVKTNQNQSAETAS
RKKELVRNEFTEIKAVIEERENEIMKAITEEEKRVWNKFDYIYSVLGNKKNEIQSLKDQI
EMALTESDDVLFLKRAAALQRTSTKEAFVPVVEMDQNVMHSTYQSAINLKEIVKISVIQS
REKKEEVKLVKIKAPPVAHPNKTPVGKKPYGPHYTHQEKTLPQAQTTSQVETDTKEKKKA
AKVAPTTTPTTTAAASKELISSFLKKPREELLQYAANITLDYNTAHNTVVLSENYTKMSI
SDTSAGHRYHPQRFTDYRQVLGFQCFKRGIHYWEVELQHNSFCGVGICYGSMERQGPESR
LGRNSKSWCIEWLNSKISSWHNDTEKCLPITKATKIGVLLHCDGGFVIFMAVGEKHNLIY
KFKAQFTEALYPAFWLFSSDAAVSLCQMKA
NT seq 1893 nt   +upstreamnt  +downstreamnt
atggcagcgctggagtcggagtcgggcctgtcggggctggaggaggagctcacctgctcc
atctgcctctgcctcttcagcacccccgtgacggggccctgcgggcacaacttctgcgcc
tcctgcctggagctcacctgggccgggctctcggggggcttcagctgcccgcagtgccgg
gccacgttcgcgggccgcccgcagttgcagaagaatacggtgctatgccgggtggtggag
cagctccagggccacgccggggccaagggcgaggaagaggggcaggaggagggggagcca
gcagggtgctgggcgggggagccccccgtgtcctgcgacagctgccgggaggcgccggcc
gtgcagacctgcctgacctgcaccgcgtccttctgcgcagagcacctgcggccgcaccgc
gacagccccgccttccgcgaccaccagctctgcccgcccctgcgcgacctgcagcagcgc
aagtgcccccagcacaacaggctcttcgagttcttctgcagcaagcacggcgtctgcatc
tgctccctctgcctgctcgggcacaagttgtgccctaccagccctttggaacaggcaaaa
gccgctgcccagtcggtgctgaagaagaaactcgtggagctgcatagtcagagtgaaaga
actgcccgggcaatgagcacagtgaaaacaaaccagaaccaatctgctgagacagcttca
agaaagaaggaattggtcagaaatgagtttacagaaattaaagctgtaattgaagaaaga
gaaaatgagatcatgaaagcaattacagaggaagaaaagagagtttggaataagtttgat
tatatttacagtgttctgggaaataagaagaatgaaattcagtctctcaaagatcagatt
gagatggcactgactgaaagtgatgacgttctgtttttgaagagagcagcagcactgcaa
cgaacatcaacaaaagaggctttcgttcctgtagttgaaatggaccaaaatgtgatgcat
tccacttaccagtctgccattaaccttaaagaaatagtgaaaatttcagtgattcagagt
agggagaaaaaagaagaagtcaaacttgtgaaaattaaggcccctccagtggctcatcca
aacaaaacccctgttggaaaaaagccttatggaccacactacacccaccaagagaaaacc
cttccccaggctcaaaccacttcgcaggtggagacagataccaaagagaaaaagaaagct
gctaaagttgcaccgaccaccacaccaaccaccacagctgctgcttctaaagagctcatt
agcagcttcctgaagaaacccagagaggagctcttgcagtatgctgccaacatcacactg
gattacaacacagctcacaacaccgtggttctgtctgagaactacaccaagatgtccatc
tcagacacctccgcaggtcacaggtaccaccctcagcgcttcaccgattaccgccaggtg
ctgggcttccagtgcttcaagagaggcatccactactgggaggtggagctgcagcacaac
agcttctgcggcgtcggcatctgctacggcagcatggagcggcagggccccgagagccgc
ctgggcaggaacagcaagtcctggtgcatcgagtggctcaactccaaaatatcatcctgg
cacaatgacactgaaaagtgcttgcccatcacaaaggctaccaagattggggtgctactc
cactgcgacgggggctttgtgattttcatggcagtgggggagaagcataacttgatctat
aaattcaaagcccagttcactgaagccttgtacccagccttctggctgttttccagtgat
gctgctgtctctctctgtcaaatgaaagcataa

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