Corvus brachyrhynchos (American crow): 103619113
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Entry
103619113 CDS
T08418
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103619113 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbrc03041
]
103619113 (DDX5)
03009 Ribosome biogenesis [BR:
cbrc03009
]
103619113 (DDX5)
Enzymes [BR:
cbrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103619113 (DDX5)
Spliceosome [BR:
cbrc03041
]
Complex A
U1 snRNP components
U1 related factors
103619113 (DDX5)
Complex B
103619113 (DDX5)
Ribosome biogenesis [BR:
cbrc03009
]
Eukaryotic type
Pre-60S particles
Helicases
103619113 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
103619113
NCBI-ProteinID:
XP_017594634
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERG
DGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATP
GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE
VRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTI
VFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGL
DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQ
AINPKLLQLIEDRGSGRSRGDRRDRYSAGKRGGFSSFRERENFERTYGALGKRDFGAKTQ
NGAYSAQSFSNGTPFGNGFAAAGMQAGFRAGGNPAGAYQNGYEQQYGSNIANMHNGMNQQ
QYAYPATGAAPMIGYPMPTSYSQ
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaattcagaggcagaacttcactgaaccaactgctattcaagcacaaggttgg
cctgttgcattgagtggattggatatggtcggagtggcacagactggatcagggaaaaca
ctctcttacttactgcctgctattgtgcatataaatcatcagccattcctggagcgagga
gatggacctatttgtcttgtgctggcaccaacccgtgaactggcccaacaagtgcagcag
gtggctgctgaatacagcagagcgtgtcgtttgaagtccacatgtatttatggaggtgct
ccaaagggaccacaaatccgtgacctggaaagaggtgtggaaatctgtattgcaacacct
ggaagacttatagacttcttagaagctggaaagaccaatctcaggaggtgtacttacctt
gtccttgatgaagctgacaggatgcttgacatgggatttgaacctcagatcagaaaaatt
gtggatcagataagacctgacaggcagactctgatgtggagtgccacatggcctaaggaa
gtgaggcagctggccgaagatttcttgaaagaatatgtgcacatcaacatcggtgcactg
gaactgagtgcaaaccacaacattcttcagattgtggatgtgtgtcatgatgtcgagaaa
gatgacaagcttattcgtttgatggaagaaatcatgagtgagaaggaaaacaaaacaatt
gtttttgtggaaaccaaaaggcgttgtgatgatcttaccagaaaaatgaggagagatggg
tggccagcgatgggtattcatggtgataaaagtcagcaggagcgggactgggttctaaat
gaattcaaacatggaaaagcaccaatcctgattgctacagatgttgcatccagaggtcta
gatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggactat
atccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacattcttt
actcctaacaatattaagcaagtaaatgacctcatctctgtgcttcgggaggctaatcaa
gccatcaaccccaaattgcttcagctgattgaagacagaggttcaggtcgttcccgaggt
gaccgacgtgacagatactctgcgggcaaaaggggtggatttagtagttttagagagagg
gagaactttgagagaacctatggtgcgctaggcaagagagactttggagcaaaaacccaa
aatggggcttacagcgcccagagtttcagcaatggaactccctttgggaatggctttgca
gctgcaggcatgcaggctggcttcagggccggtggtaaccccgcaggagcgtaccagaac
ggctatgagcagcagtatggcagtaacattgccaacatgcacaatggcatgaaccagcag
cagtatgcctatcctgccactggtgctgctcctatgataggttaccccatgcccacaagt
tattctcaataa
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