Corvus brachyrhynchos (American crow): 103619199
Help
Entry
103619199 CDS
T08418
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc02010
ABC transporters
cbrc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103619199 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103619199 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbrc02000
]
103619199 (ABCA1)
Transporters [BR:
cbrc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
103619199 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
103619199
NCBI-ProteinID:
XP_017594835
LinkDB
All DBs
Position
Unknown
AA seq
2277 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECKYQTQQ
LYPECLLFHAFNSTLEASLNLILYMVNGIICNANNPCFRYPTPGESPGIVGNFNASIVSR
LFSDARRLLLYSQQDTSIKDVQKVLGKLHKLGNSSALDLKLRDFLIDNETFSDFLHHNVS
MPSSAVEELLDAGVNLQQVIVSGYRMRLQDLCKNSTLSEFLTIQNQTAATDSEAFICTLS
KEKLHAAEQAFRANLNPLKPLQRRLSFNSSLWDLSETVETLRESIGKLVKELLSMKSWSD
MRQEVMFLTNVNASNSSTQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTE
DDVINFYDNSTTPYCNEIMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAVRKVMSEVN
RTFQELGVFRDLGGMWEEISPKIWTFMESSQEMDLIRTLLKGKALWDLHLPASNWTVEDV
ARFLSNNPEDFETENGSLYTWMDAFNETDRAIQTISRFMECVNLDKLEPVPTEVQLINKS
LELLDERRFWAGIVFTEIAPDSTDLPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPF
EDMRYVWGGFVYLQDVVEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDVFLRVMSRSMPLF
MTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNGILWLSWFISSLVPLLMSAGLLVLI
LKMGNLLPYSDPSVVFIFLSIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVL
CVAWQDHISFSLKIFASLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITT
SAVMMLFDTFLYGVMTWYIESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRQHPHPDQKGS
SEVCKEEEPVHLSLGVSIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTM
SILTGLFPPTSGTAFILGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGL
PEKKVKEEMEQMATDVGLPHKLKARTSRLSGGMQRKLSVALAFVGGSKVVILDEPTAGVD
PYSRRGIWELLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGT
GYYLTLVKKDVDSSLSSCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAIS
NLITKHVPEARLVEDIGHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTL
EEIFLKVADDSGVDAETSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPESRE
TDLLSGMDGKGSYQMKGWKLSKQQFVALLWKRMLIAKRSRKGFFAQIVLPAVFVCIALMF
SLIVPPFGKYPSLELQPWMYDEQYTFVSNDAPEDAGTHKLLDALLDKPGFGTRCMQGHSI
PDTPCTVGQKEWTTASVPESVLDTFLKGNWSMENPSPSCECSSEKIKKMLPVCPPGAGGL
PPPQREQDTADILQNLTGRNISDYLVKTYAQIIGKSLKNKVWVNEFRYGGFSLGASSSLV
LPPSHEVTDAIKQVKKILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIAS
FVNVINNAILRASLQQGENPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFA
MSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVVIIFICF
QQKSYVSSSNLPVLALLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVA
TFVLELFTNNKLKDINDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGEDRFVSPL
SWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIIS
GGGQSDILEIKELTKIYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTD
VTGGEAFLKGNSILSNIQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKV
GEWAIRKLGLVKYGEKYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLW
NCALSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVR
IAGANPDLKPVEEFFGHAFPGSVLKEKHRNMLQYQLPSSPSSLAKIFSILSQNKKRLHIE
DYSVSQTTLDQVFVNFAKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6834 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagctggggttgctgctatggaagaactttacctacagaagaaga
cagactttccagctgctgattgaagttgcctggcctctgtttatcttctttatcctgatc
tctgtaagactttcatatccgccctatgagcagcatgaatgtaagtaccaaacacagcag
ctgtacccagaatgcttgttgtttcatgcattcaacagcacacttgaagcttccttaaat
ctcatactttacatggtgaatgggatcatctgcaatgccaacaacccatgtttccgctac
ccaactcctggggaatcccctggtattgttggaaacttcaatgcctccattgtttcccgc
ctgttctcggatgccaggaggttactgttgtacagccaacaggacacaagtataaaggat
gtccagaaggtcctgggaaaactacacaagttgggaaattcctctgccttagacctgaaa
cttcgggatttcctgattgacaatgagacattctctgacttcctccatcataatgtgtcc
atgccatcatctgcagtagaggagctgctggatgcaggggtcaacctccagcaggtcatt
gtgtctggttatcgaatgcgactgcaagatctctgcaaaaactcaacattgtctgaattt
ctcaccatccaaaatcagacggcagccacagactctgaagccttcatttgcaccttgtca
aaggaaaaactccatgcagctgagcaagccttccgtgctaaccttaatcctttgaagcct
cttcagagacgactttctttcaattcctccttgtgggatctctcagaaactgtggaaact
ttgagagagagcattgggaagcttgttaaagagctgctgagcatgaagagctggagtgac
atgaggcaagaggtgatgttcctgaccaatgtgaatgcctcaaactcctctacgcagatc
tatcaggctgtgtcacgcatcgtgtgcggccatcctgagggtggagggctcaaaattaaa
tccctcaactggtatgaggataacaattacaaagcactgtttggaggcaacagcactgaa
gatgatgtgattaacttctatgataactccacaacaccctactgcaatgagataatgaag
aacctggaatccagcccgctttccaggattatctggagggctttgaaacccttactgatt
gggaagatcttgtacactccagatacgccagctgtaaggaaggtcatgtctgaggtgaac
aggacattccaggagctgggtgtgtttcgtgacctcgggggaatgtgggaggagataagc
ccaaagatttggacatttatggaaagtagtcaggaaatggatctcattcggacgttgctg
aaaggcaaagccctctgggacctgcatttgccagcttccaactggacagtggaagatgtt
gctcgtttcctgtcaaacaatccagaggactttgagacagaaaatggctctctgtatacc
tggatggatgccttcaatgagacagaccgggctatccagaccatctcccgcttcatggag
tgtgtcaacttggacaaactggagcctgtgcccacagaagtccagctcataaacaagtcc
ttggagcttctggatgaaaggaggttctgggccggcatagtcttcactgaaatagctcct
gacagcacagaccttcctcagcatgtgaaatacaagatacgcatggacattgataatgtg
gagaggaccaacaagatcaaggatgggtactgggatcctggtccccgtgctgaccccttt
gaggacatgcgctatgtctggggaggctttgtctacctgcaggatgtggtagaacaggcc
atcatcagagttcagacaggcacggagaagaagacaggagtttatgtgcagcagatgccc
tacccatgttacgtggatgacgtatttctgcgtgtcatgagccgctccatgcctctcttc
atgactctagcttggatctactcagtggctgtgataattaagggcattgtgtatgagaag
gaagcccgcctgaaagaaacaatgaggattatgggacttgacaatggcatcctttggtta
agttggttcattagtagccttgtccctctcctgatgagtgcaggattgctggtgctgatc
ctgaagatggggaatctgctgccctacagcgaccctagtgtggtgttcattttcctctca
atcttcggtgttgtgaccatcctccagtgcttcctcatcagcaccgtgttctccagggcc
aacctggcagctgcctgtgggggcattgtctacttcacgctgtacctaccttatgtgctg
tgtgttgcctggcaggaccatatcagcttctcactcaagatttttgcgagcctgctgtct
ccagtagccttcggtttcggttgcgagtacttcgcactgttcgaggagcagggagttggt
gttcagtgggacaacttctttgagagcccattggaagaagatggctttagcatcaccaca
tcggctgtcatgatgctgtttgatacttttctgtatggagtcatgacctggtacattgaa
tctgtcttcccaggccagtatgggattcccagaccctggtactttccttttacaaagtcc
tattggtttggggaggaaccacaggacaggcagcatccccatcctgaccagaaggggtct
tcagaagtctgcaaggaagaagagccggtgcatctgagtcttggtgtttccatccagaac
ctggtcaaagtttaccgtgatgggaagaaggttgctgtagatggtctcacacttaacttc
tatgaaggacaaatcacctcctttctgggacataatggagcagggaaaaccactaccatg
tcgattttgactggcttgttccccccaacttcgggtacagccttcatcctgggcaaagat
atccgctctgagctgagcaccatcaggcagaacctgggagtatgtccacaacacaatgtg
ctgtttgacttgctgactgtagaggagcacatctggttctatgctcggctcaaagggctg
ccagaaaagaaggtgaaagaggagatggagcagatggcaacagatgttggtttgcctcac
aaactgaaagctaggacaagcagactctcaggtggcatgcagaggaagctctctgttgcc
ttagcatttgtcggtggctccaaggttgtcattctggatgagcctacagctggggtagat
ccttattctcgcagagggatatgggaactgcttctgaagtatcggcaaggtcgcactatc
attctctccacacaccacatggatgaggcagacattctgggggaccggattgccatcatt
tctcatggcaagctctgctgtgttggctcttctctcttcctgaagaaccagctgggaaca
ggctattatttgaccctggtcaaaaaggatgtggattcctctctaagctcctgccgaaac
agcagcagcacagtttcctatctgaaaaaggatgacagtgtctctcagagcagctctgat
gctggccttggcagtgaccatgaaagtgacacactgacaatagatgtctctgcaatttca
aatctcattacgaagcatgttcctgaggcaagactagtagaggacataggccatgaatta
acctatgtcttgccatacaaagctgctaaagagggagcttttgtagagctgttccatgaa
attgatgaccgtctttccgatcttggcatttccagctatggcatctccgaaactactctg
gaggagatcttcctgaaagtggctgatgatagcggtgtggatgcagaaacctcagatggg
acgttgccagccagaaggaacagacgtgtgtttggagacagacagagctgccttcgtcca
tttacagaagacgatgcatttgatcctaatgactcagacatagatccagaatccagagag
acagaccttctcagtggcatggatgggaaaggctcctaccagatgaagggctggaagctc
tccaagcagcagttcgtggctctgttgtggaagaggatgctcattgccaagagaagccgg
aagggcttctttgcccagattgtgcttccagctgtctttgtgtgtattgctctcatgttc
agcctgattgttcctccttttgggaagtatcccagcctggaattacaaccctggatgtat
gatgagcagtacactttcgttagcaacgatgctccagaagatgcaggcactcacaagctg
ttggacgcccttcttgataagcctgggtttgggacacgctgtatgcagggacattccatc
ccagacactccttgtactgtggggcagaaggaatggaccactgcttcagtcccagagtca
gtcctggacaccttcttgaaaggcaactggagcatggagaacccttccccatcttgcgag
tgcagcagtgagaagatcaagaagatgctgcctgtgtgcccccctggtgcaggcgggctg
ccacccccacagcgtgagcaagacacagctgacatcctccagaatctgacaggccgcaat
atatcagactacctagtgaagacctacgcacagatcattgggaaaagcttaaagaataaa
gtctgggtgaatgagttcaggtatggtggcttttccttgggagccagcagttccctcgtg
cttcctccaagccatgaagtcactgatgccattaagcaggtgaagaaaatcttggagctg
gcacaggggagttctggagatcgatttctcaacagcttatcaagtttcatgaagggcctg
gatacaaagaataacgtgaaggtgtggtttaacaacaagggctggcatgccattgcatcc
ttcgtgaatgtgatcaacaatgccatccttcgggccagcctccagcagggtgaaaacccc
agtgcttatgggatcactgccttcaatcacccactcaacctcaccaagcagcagctctct
gaagtagccctgatgaccacctctgtagatgtcctcgtctccatctgtgtgatctttgcc
atgtcctttgttcctgccagctttgtggttttccttattcaggaacgtgtcagcaaggct
aaacacttgcagttcatcagtggtgtgaagcctgtgatctactggctggccaattttgta
tgggatatgtgcaactacattgttccagctacactagttgtcatcatcttcatctgcttc
caacagaagtcctatgtatcctcctccaacttgcctgtgctggctctccttctgtttctc
tatgggtggtccatcacccctctcatgtatccagcctccttcgtgttcaaaatccccagc
acggcctatgttgtgctgaccagtgtgaaccttttcattggcatcaatgggagtgtggcc
acctttgtcctggagctcttcaccaacaataagctgaaggacatcaatgacatcctgaag
tctgtcttcctcatcttcccccacttctgcctggggcggggactcattgacatggtgaaa
aaccaggctatggctgatgctctggagagatttggagaggatcgttttgtgtcccctctg
tcatgggacctggtgggaaggaatctctttgccatggcagtagagggcgttgtctttttt
ctcatcacagtgctcatccagtacaggttcttcatcaaacccaggcctgtctatgccaag
ctgcctcctgtgaatgatgaagatgaggatgtaaccagagagaggcagaggataattagt
ggaggaggacagagtgacattttggaaatcaaggagctaaccaagatttacagaatgaag
agaaaaccagcagttgataggatctgtgttggaatcccccctggagagtgctttggactc
ctgggagtaaatggtgctggcaagtcatccacttttaagatgctaactggagatacagat
gtgacaggaggagaagctttcctcaaaggaaacagtatcttgtccaacatccaagaagtc
catcagaacatgggctactgcccacagtttgatgctgttaatgaactgctgacagggcga
gagcacctggagttctttgcactcctgagaggtgttccagagaaagaagtctgcaaggtt
ggcgagtgggcaattcggaaactgggccttgtgaaatatggagaaaaatatgctgggaat
tacagtggagggaacagacgcaagctttccacagccattgccctcattggagggccacct
gtggtgttcttggatgagccaacaacagggatggatcccaaagcacgtcgtttcttgtgg
aactgtgctctgagtgtaatcaaggaggggagatcggtggtgctcacatctcacagcatg
gaagaatgtgaagccctgtgcactcgaatggcaataatggtcaatgggcgatttaggtgc
ctgggcagtgtccagcatctaaagaacaggtttggagacggttacaccatagtggtgaga
attgcaggggcaaacccagacctgaagcctgttgaggagttctttgggcatgccttccct
ggaagcgtcctgaaggaaaaacatcggaatatgctgcagtaccaacttccctcttcacca
tcctccctggccaaaatattcagtattctctcccagaacaaaaagagactccacatagaa
gactactccgtttctcagaccacacttgaccaagtttttgtaaattttgctaaggaccaa
agtgacgacgaccatactaaggacctgtcactgcataaaaaccagactgtggtagacatt
gcaatccttaactccttcctgcaagatgagaaggtaaaagaaagttgtgtgtga
DBGET
integrated database retrieval system
