Corvus brachyrhynchos (American crow): 103619353
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Entry
103619353 CDS
T08418
Symbol
SCAF8
Name
(RefSeq) LOW QUALITY PROTEIN: protein SCAF8
KO
K13191
RNA-binding protein 16
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbrc03021
]
103619353 (SCAF8)
03041 Spliceosome [BR:
cbrc03041
]
103619353 (SCAF8)
Transcription machinery [BR:
cbrc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103619353 (SCAF8)
Spliceosome [BR:
cbrc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103619353 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103619353
NCBI-ProteinID:
XP_008636109
LinkDB
All DBs
Position
Unknown
AA seq
1326 aa
AA seq
DB search
MTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFA
PRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDXTPVLPSTTAAM
SNNTPGTPVTPVTPANVAQSLPDPWVSQIANTDTLAAVAQILQSPQGQQLQQLIQTLQIQ
QQKPQPSLLQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQSVSFNKKLMDRFDFGEES
EQNEEPKKETPSSQLPLVPESVNNSLFHQLAEQLQQQNLEHLRQQLLEQQQPQKASPEEN
QEGNFGSEHSASPSQGSSQQQFLEVETNVDDSMDIQQQDMDIDEGQDIAEEEIFEQEEKK
SAVRSRSRTRSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAR
EREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRG
CAYVCMVHRQDAYRALQKLSSGSYKIGSKIIKIAWALNKGVKTEYKQFWDVDLGVSYIPW
EKVKLDDLEGFAEGGMIDQETVNTEWETARSSEAAKENTQTTQSAAVDKSTVITTQTEAY
TQPVTMLQIPVAPAVPAVSLVPPAFPVTMSVPPPGYSPIPPPPFLRASFNPSQPPPGYMP
PPVPPVVPPPVVPPPVVPPVVPTSLVQPPLPIAQETMKDVPFTSLVLPVGTVTSNLATPT
LSAGSVFNPLPINKPESDDKGSHLTDLQISSSENNRSVQSDVSSSSGLVGGVQPPSVSSN
SGLSGEGPPPTVSSSSGLAGGVQPPSVSSNSGLGGGVQPPTVSSNSGLAGGMQLPAVSSS
SSLAGGIQPTNASSSSGLVAGVPPPNVSSSSGLLAGVHPPSVSSSPGLLTGMQPPSVSSS
SGVLAGVQPPNVSSNSGLLIMPPPNVSTSSGLMGVPPPNISSNSGLLAMQHPAAVPNMPH
LNISNQRMPGMHLIDIRPGLMPHSPGPRFPLMQPGLPPQRSIPPPAILDPSLHPPPPRGP
FPPGDIFNQTERPFGTPGRQNIDNISSNPEKRLLPLGGDNIQQEGDRDYRFPPVENRDNL
NRPSPVDVRDSVGRPPVDPREGIGRPPVDGREHFARPHIDMRENFGRPGIDNLGRREHFG
FNSDKHWGQRGDYDEREHHAFPIYGGPKGFHEDRERFRHVNYRFDSRSGPSWNRGFEQDA
HRDFDDRRRPWERQRDRDDRDFNFCREINGNRFGRDRMSNNWIPPPHPRVFEYFDGATSQ
RKADDMPQVNGENTETESQPPTAQVQDDPELYEKLSSSVEINKEKSDTEADIESEPVVES
TETEGT
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgacacagatcaccaaggcagcaatcaaggctataaagttctacaagcatgttgtacag
agtgttgagaaattcattcaaaagtgcaaaccagagtacaaggtgcctggtctgtatgtc
attgactccattgtgagacagtcccggcatcagtttggacaagaaaaggatgtgtttgca
ccaaggttcagcaataacatcatcagcacgttccagaacttgtaccgttgtcctggtgat
gacaagagtaaaattgttagagtgctaaatttatggcagaagaataatgtgttcaagagt
gaaattattcagcctctcttggatntgacccctgtcttgcccagcactacagctgctatg
agcaacaatacgccaggtacacctgtgactccagttaccccagccaatgtggcgcagagt
ttacctgatccttgggtatcccagattgctaacacagacacccttgctgctgttgcacag
attttacagagtcctcaaggccagcagcttcagcagttgatacagacactgcagatacag
cagcagaaacctcagccttcactacttcaagccctggatgctggtcttgtcgtccagtta
caggccctcacggcacaactcacagctgctgctgctgctgctaacacacttaatccactg
gaacagagtgtctcttttaataagaagctgatggacaggtttgactttggcgaagaatcg
gaacaaaatgaagagcctaaaaaggaaactccctcttcccaattgccattagtaccagaa
tctgtgaacaactcactttttcaccaactagctgaacagctacagcaacaaaatttagaa
catctcagacaacagcttttggagcagcagcagcctcaaaaggcaagccctgaggagaat
caagaaggaaattttggttcagagcactctgcgtcaccatcacaagggagcagtcaacag
cagtttttagaagtggaaactaatgtagatgattcaatggatattcaacaacaggacatg
gatatagatgaaggtcaggatattgctgaagaagagatttttgaacaagaagaaaagaaa
tcagctgttcgttcaagatcaagaactcgttcaagatctcgttcaaggtcaccaaggaaa
cgaaggtctagatcacggtctggttctcgtaaacggaaacacagaaagcgttcacgctca
agatcaagagaaaggaagagaaagtcatctcggtcatactccagtgaaagaagggctcgg
gaaagggaaaaagaacgtcagaaaaagggattgcctcctatacgttcaaaaacactaagc
gtttgcagtactactctttgggtaggtcaagtagacaagaaggctacacagcaggattta
acgaacttgtttgaagaatttggacaaatagagtcaattaatatgatccccccaagagga
tgtgcttatgtctgtatggtacatagacaagatgcatatcgtgctcttcagaaacttagc
tctgggtcttataaaattggatctaaaattattaagattgcttgggctttgaataaaggt
gtgaaaacagaatacaagcaattctgggatgtggatctgggagtttcctatattccatgg
gagaaagtgaaattggatgatttggagggctttgctgaaggtggcatgattgaccaggaa
acagtaaatacagagtgggaaacagccagaagctcagaagctgctaaagaaaatactcaa
acgacgcagagtgctgcagttgataagagtaccgttattacaacacagacagaagcttac
acacaaccagtcactatgctgcagattccagtagctccagctgtgcctgctgttagcttg
gttccacctgcatttcctgtcacaatgtctgtccctcctcctggttatagcccaattcct
cctccacccttcctgagagcaagtttcaacccttcacagccacctccaggttatatgcct
cccccagttccacctgttgtcccgccacctgttgtcccaccacctgttgtcccaccagtt
gttccaacatctttggtacagcctccattaccaattgcacaagagacaatgaaggatgtt
ccttttactagccttgttctaccagttggcacagttactagcaatctagctactccaaca
ttatctgctggaagtgtttttaatcccctgccaatcaacaaaccagaatcagatgacaaa
ggatcacatcttacagaccttcagatttcttctagtgaaaacaatagatctgtgcaaagt
gatgtctcaagtagctctggacttgttggaggagtgcagccacccagtgtctcaagcaat
tctgggctttctggagaagggccaccacccactgtctcaagtagctctggacttgcaggg
ggagtacagccacccagtgtttcaagcaactctggtcttggaggaggagtgcaaccacca
actgtttccagcaattctggtcttgcaggaggaatgcagctacctgctgtttccagtagc
tcttctcttgctggcgggattcagccaactaatgcctcaagtagctctggacttgtggct
ggagtgccaccaccaaatgtctcaagtagctcagggcttctggctggagtgcatccaccc
agtgtctcaagcagccctggccttctgacaggaatgcagccacccagtgtgtccagcagc
tcaggagttctggcaggagttcagccaccaaatgtttcaagcaactctgggcttctcata
atgccaccacccaatgtttcaactagttctggacttatgggagtgccaccaccaaatatt
tcaagtaattctggacttctggcaatgcagcatccagctgcagttccaaacatgcctcat
ttaaatatcagtaatcaaagaatgccaggaatgcatcttatagatatccgtccaggccta
atgccccattcgcctggaccaaggtttccattaatgcagccaggactgccaccacagcgt
agtattcctcctcccgcaatccttgatccatctcttcacccaccaccacctcgaggtcct
tttcctccaggagatatttttaatcaaacagaaagaccttttggaacaccaggaagacaa
aatatcgataacatttcttctaatccagagaaaagactactaccacttggaggtgataac
attcaacaggagggagacagagattatcgctttcctccagtggaaaaccgagataatctt
aacagaccatctccggtggatgtcagagattctgttggacgaccaccagttgatccaaga
gagggtataggaaggcctccagtagacggaagagagcactttgcaagaccacatatagac
atgagagaaaattttggaagaccaggtatagataaccttggccgaagagagcattttggt
ttcaattcagacaagcactggggacagagaggagattatgatgaaagagagcaccatgcc
ttccctatttatggtggccctaaaggcttccatgaagacagagagaggtttcggcatgtg
aactataggtttgatagtagaagtggtcccagttggaatagaggatttgaacaagatgct
cacagagattttgatgaccgcagaagaccctgggaaagacagagggatagggatgacaga
gattttaatttttgcagagaaattaatgggaacaggtttggaagagacagaatgtcaaac
aactggatcccgcctccacatccacgggtgtttgagtattttgatggggccacttctcaa
cgcaaagctgatgatatgcctcaggtaaatggtgaaaatacagagacagaaagtcagcca
ccaactgcacaggtgcaggatgatccagaactttatgaaaaactgtcatcttccgtcgag
ataaacaaagagaagagtgacacagaagctgatatagagagtgaaccagtggtagaaagc
acagaaactgaggggacataa
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