Corvus brachyrhynchos (American crow): 103619434
Help
Entry
103619434 CDS
T08418
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103619434 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrc03019
]
103619434 (HBS1L)
Messenger RNA biogenesis [BR:
cbrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103619434 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
Astrovir_pp_1
AAA_22
DO-GTPase2
GIP1_N
MMR1
Motif
Other DBs
NCBI-GeneID:
103619434
NCBI-ProteinID:
XP_017594907
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
CFCLIDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATFAEPLEEEYGYEGTDAAAD
CFPSTHQLTEVDRARLNSCLDQMREVLAESIPEQAMVQAVLDTKFDVQKALDLVLSQGSK
QNVKTKNKDAVILAKTTKGKTRDSQSTRMESEIVPKITKMTVSGKKQSMGFEVPCAIAEE
NGHTNTPQKGLLPEDARVASGVLEAVSKSTLPPQVVQVSEEQNMVPSPAKKSSKAKPQID
VKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGKAS
FAYAWVLDETGEERERGVTMDVGMTKFETPTKVITLMDAPGHKDFIPNMITGAAQADVAI
LVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITSKLG
QFLKQAGFKESDVAYVPTSGLGGENLVTRGQSSDLTQWYKGKCLLEQIDSFKPPQRSVDK
PFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLHDEPVDWAAA
GDHVNLTLTGMDIIKINVGCVFCDPKEPIKACTRFRARVLIFNIEVPITKGFPVLLHYQT
VSEPATITRLLSVLHKSTGEVTKKKPKFLAKGQNALIELQTQRPVALELYKDFKELGRFM
LRYSGSTIAAGVVTEIKE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
tgtttttgcctcatagactttgaagatgatgatgtgtatggccaatcagtagaagatgat
tattgcatttctccttcaacagcagctcaatttatttactccagacgagacaaaccagcc
acatttgctgagccattagaagaagaatatggctatgaaggtaccgatgctgctgctgat
tgttttccatccacgcatcagttgactgaagttgatagagcccgtcttaattcatgcctt
gatcaaatgagagaagttttggcagagtccataccagaacaagcaatggtgcaagcagta
ctggatactaaatttgatgtacaaaaggctttggatcttgtgctttcacaaggcagtaag
caaaatgtgaagaccaagaataaggatgctgtgattttagcaaagactacaaaaggaaaa
acaagggattcccagtcaaccagaatggaatctgaaattgtgccaaaaattaccaaaatg
acagtgtctggaaagaaacaatctatgggatttgaagttccatgtgcgattgctgaggaa
aatggccacactaacacacctcagaaaggactgttacctgaagacgccagagtagcttct
ggggtacttgaggctgtctcaaaatctactcttccacctcaagtagtgcaggtttcagaa
gagcagaatatggtgcctagtccagcaaaaaagtcaagcaaggcaaaaccacaaatagat
gtgaaagcagagttggagaagagacaaggaggaaagcaactgctgaatttggtggtaata
ggacatgttgatgcaggcaaaagtactttaatgggtcatttgctctaccttttgggaaat
gtgaacaaaagaactatgcacaaatatgaacaggaatctaaaaaggctggtaaagcttca
tttgcctatgcatgggtcttggatgaaactggtgaagaaagagaaaggggagtgacaatg
gatgtgggtatgaccaaatttgagacaccgactaaagtaattacgctgatggatgctcca
ggccacaaagacttcattccaaatatgatcacaggagctgcacaggctgatgtggcaatt
ttggttgtggatgccagcagaggagagtttgaggcaggatttgagacaggtggacaaact
cgagaacatggattattagtgcgctctcttggagtgacgcagctggctgttgcagtcaat
aaaatggaccaggttaattggcaacaggaaagatttcaggaaattacaagtaagcttggc
caatttcttaagcaagctggctttaaggaatcagatgtggcttatgttccaacaagtggc
cttggtggtgaaaacctagtcacaaggggtcagtcaagtgacctcacacaatggtataaa
ggaaagtgtttgttagagcaaattgattctttcaaaccaccacagagatcagtggataaa
ccatttagactgtgtgttgctgatgtttttaaagaccaagggtcaggattttgtgtgact
ggtaaaatagaagcaggctatattcaagttggagaacgacttctggcaatgcctcccaat
gaaacttgcactgcaaaaggaatcacactgcacgatgaaccagttgattgggctgcagca
ggagatcacgttaatctcactttgaccggcatggatatcatcaaaatcaatgtgggctgt
gtattttgtgatcccaaggaacccattaaagcttgcactcggttcagagctcgagttctc
atcttcaatattgaggttccaatcactaaaggatttcctgtgcttttacactatcaaaca
gtaagtgaacctgctactattacaaggctgttgagtgtcctgcacaaaagcactggtgaa
gtgacaaagaaaaaacctaagttcttggctaaaggacagaatgctctaatagaactacaa
actcaaagacctgttgctttagagttgtacaaagattttaaagagctggggaggtttatg
ttacgctacagtggttccactattgctgcaggagttgttacagagattaaagaatga
DBGET
integrated database retrieval system
