Entry |
|
Symbol |
HBS1L
|
Name |
(RefSeq) HBS1-like protein
|
KO |
K14416 | elongation factor 1 alpha-like protein |
|
Organism |
cbrc Corvus brachyrhynchos (American crow)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cbrc00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103619434 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cbrc03019]
103619434 (HBS1L)
Messenger RNA biogenesis [BR:cbrc03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103619434 (HBS1L)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
678 aa
CFCLIDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATFAEPLEEEYGYEGTDAAAD
CFPSTHQLTEVDRARLNSCLDQMREVLAESIPEQAMVQAVLDTKFDVQKALDLVLSQGSK
QNVKTKNKDAVILAKTTKGKTRDSQSTRMESEIVPKITKMTVSGKKQSMGFEVPCAIAEE
NGHTNTPQKGLLPEDARVASGVLEAVSKSTLPPQVVQVSEEQNMVPSPAKKSSKAKPQID
VKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGKAS
FAYAWVLDETGEERERGVTMDVGMTKFETPTKVITLMDAPGHKDFIPNMITGAAQADVAI
LVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITSKLG
QFLKQAGFKESDVAYVPTSGLGGENLVTRGQSSDLTQWYKGKCLLEQIDSFKPPQRSVDK
PFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLHDEPVDWAAA
GDHVNLTLTGMDIIKINVGCVFCDPKEPIKACTRFRARVLIFNIEVPITKGFPVLLHYQT
VSEPATITRLLSVLHKSTGEVTKKKPKFLAKGQNALIELQTQRPVALELYKDFKELGRFM
LRYSGSTIAAGVVTEIKE |
NT seq |
2037 nt +upstreamnt +downstreamnt
tgtttttgcctcatagactttgaagatgatgatgtgtatggccaatcagtagaagatgat
tattgcatttctccttcaacagcagctcaatttatttactccagacgagacaaaccagcc
acatttgctgagccattagaagaagaatatggctatgaaggtaccgatgctgctgctgat
tgttttccatccacgcatcagttgactgaagttgatagagcccgtcttaattcatgcctt
gatcaaatgagagaagttttggcagagtccataccagaacaagcaatggtgcaagcagta
ctggatactaaatttgatgtacaaaaggctttggatcttgtgctttcacaaggcagtaag
caaaatgtgaagaccaagaataaggatgctgtgattttagcaaagactacaaaaggaaaa
acaagggattcccagtcaaccagaatggaatctgaaattgtgccaaaaattaccaaaatg
acagtgtctggaaagaaacaatctatgggatttgaagttccatgtgcgattgctgaggaa
aatggccacactaacacacctcagaaaggactgttacctgaagacgccagagtagcttct
ggggtacttgaggctgtctcaaaatctactcttccacctcaagtagtgcaggtttcagaa
gagcagaatatggtgcctagtccagcaaaaaagtcaagcaaggcaaaaccacaaatagat
gtgaaagcagagttggagaagagacaaggaggaaagcaactgctgaatttggtggtaata
ggacatgttgatgcaggcaaaagtactttaatgggtcatttgctctaccttttgggaaat
gtgaacaaaagaactatgcacaaatatgaacaggaatctaaaaaggctggtaaagcttca
tttgcctatgcatgggtcttggatgaaactggtgaagaaagagaaaggggagtgacaatg
gatgtgggtatgaccaaatttgagacaccgactaaagtaattacgctgatggatgctcca
ggccacaaagacttcattccaaatatgatcacaggagctgcacaggctgatgtggcaatt
ttggttgtggatgccagcagaggagagtttgaggcaggatttgagacaggtggacaaact
cgagaacatggattattagtgcgctctcttggagtgacgcagctggctgttgcagtcaat
aaaatggaccaggttaattggcaacaggaaagatttcaggaaattacaagtaagcttggc
caatttcttaagcaagctggctttaaggaatcagatgtggcttatgttccaacaagtggc
cttggtggtgaaaacctagtcacaaggggtcagtcaagtgacctcacacaatggtataaa
ggaaagtgtttgttagagcaaattgattctttcaaaccaccacagagatcagtggataaa
ccatttagactgtgtgttgctgatgtttttaaagaccaagggtcaggattttgtgtgact
ggtaaaatagaagcaggctatattcaagttggagaacgacttctggcaatgcctcccaat
gaaacttgcactgcaaaaggaatcacactgcacgatgaaccagttgattgggctgcagca
ggagatcacgttaatctcactttgaccggcatggatatcatcaaaatcaatgtgggctgt
gtattttgtgatcccaaggaacccattaaagcttgcactcggttcagagctcgagttctc
atcttcaatattgaggttccaatcactaaaggatttcctgtgcttttacactatcaaaca
gtaagtgaacctgctactattacaaggctgttgagtgtcctgcacaaaagcactggtgaa
gtgacaaagaaaaaacctaagttcttggctaaaggacagaatgctctaatagaactacaa
actcaaagacctgttgctttagagttgtacaaagattttaaagagctggggaggtttatg
ttacgctacagtggttccactattgctgcaggagttgttacagagattaaagaatga |