Corvus brachyrhynchos (American crow): 103619774
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Entry
103619774 CDS
T08418
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase LRSAM1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbrc04131
]
103619774
04121 Ubiquitin system [BR:
cbrc04121
]
103619774
Enzymes [BR:
cbrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103619774
Membrane trafficking [BR:
cbrc04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
103619774
Ubiquitin system [BR:
cbrc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103619774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
LRR_8
SAM_1
SAM_2
LRR_14
LRR_4
Prok-RING_4
AftA_C
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
103619774
NCBI-ProteinID:
XP_017595825
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MPLFSRKKKPSDDARKRLEYQMCLAKEAGADDTLDISKCELSEVPYGAFATCKVLQKKVL
IIHTNNLTSLVPKSCSLLSLITVKVLDLHNNQLASLPAXXXXPGKRCAAASQVLNLERNL
LKSLPQSIGDLTQLQVLNVKGNKLRELPGSMSGLRSLRALDVHPALAPSLPSLLPSAGSV
CSLLQTLTLDASSMTYPSPEICSAGTEAIQQFLCKECGIAYYPPSQYLLPMLESDGGGTS
VDGVDRTVEKYLEEESKWQNKFLDYEKRKEKKKQEKLEFERRLNVGQREQALLVQQLNSH
KDEILQTVREEQQRLEQGLSKHQRYLEEERLKLLQQLKDTEQGIASRIQKLLEDNQRQKQ
SSDILKSLENERIRMEQLMAITQEEMEQLRRREVASAMQQMLAETYKNKLLQMTSESRRQ
DLVSQACSSLAEMDQKFQQIQAWQQLDQNKAVSQILQQIEMQKVAFEALQVKKDLMHRQI
RNQIKLIETELLQLTQLEVKRQELDTEMLQEAVMEQRRALSCLLQQLLKEKKQREEELQQ
LLLEMEAKSETKQENYWLIQYFWRRLTQKLLSLKLQEKGLEQQLVNLLLELSADQYVPIF
AHHRISLEMLGTMSASDLEKLGVTEAGLQHAILRRAQEILAVAATIPELRREEDTAVPAA
PEPSAPPEEPAGPTAPPLPWDEKKSECVVCMEQEPQTIFLPCGHVCCCQGCCERLHSCPL
CRRDIAQRIRIFQSA
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcttctccaggaagaagaaacccagcgatgatgcccggaagcgccttgagtac
cagatgtgcctggcaaaagaagctggtgctgatgacacccttgacatatccaaatgtgag
ctctccgaggttccttatggggcctttgcaacttgcaaggtcttgcaaaaaaaggtgctg
attattcatacaaataatctgacatctttagttccaaagtcctgcagcctcctgagtctc
ataactgtgaaggttctagacctgcataacaaccagctggcatcacttcctgctgnnnnn
nnnnntccaggtaaaagatgtgcagctgcatcccaggtcctaaaccttgaaaggaatctt
ttaaaaagccttccacaatctataggagacctcacccagctccaggtcctcaatgtgaaa
gggaacaagctgagggagctgcccgggagcatgagcggcctgcggagcctgcgggctctg
gatgtccacccagccctggctccatcccttcccagcctgcttccctcagctggctctgtg
tgttctcttttgcagacgctgaccctggatgcctcttccatgacctacccatcccctgag
atctgcagtgcgggtacagaggccatccagcagttcctctgcaaggagtgtggaattgca
tactaccctccctcacagtacctgctccccatgctggagagcgatggaggaggaacttca
gtggatggggtggacaggacagtggagaagtacctggaggaggagagcaagtggcagaac
aaattcttggattatgagaagaggaaggaaaaaaaaaagcaggagaagctggaatttgag
cggcgcctgaacgtggggcagcgagaacaggccctgctcgtgcagcagctcaacagccac
aaggatgagatcctgcagacagtgagagaggagcagcagaggctggagcagggtctgtcg
aagcaccagcgctatttggaggaggagaggctgaagctgctgcagcagctgaaggacaca
gagcagggcattgccagccggatccagaagctgctggaggacaaccagaggcaaaaacaa
agttcagacattttgaagtccttggagaatgagagaatcaggatggaacagctgatggca
ataacccaggaggagatggagcagctgcgcaggcgggaagtggcctctgccatgcagcag
atgctggctgagacctacaagaacaagctcctccaaatgacctctgagtctcgtcggcag
gacctcgtcagccaggcctgctccagcctagctgagatggatcagaagttccagcaaatc
caggcttggcagcagctggatcagaacaaagctgtcagtcagatcttgcagcagattgag
atgcagaaagttgcctttgaagctctccaggtgaagaaggatcttatgcacaggcagatc
aggaaccagattaaattaatagaaacagagttattgcagctgacacagctggaggtaaag
aggcaagaactggacacagagatgctgcaggaggccgtcatggagcagcgccgggcgctc
agctgcctcctgcagcagctgctcaaggagaagaagcaaagggaggaagaactgcaacaa
ctcctgctggaaatggaggcaaagagtgaaaccaaacaggagaactactggctgatccag
tacttttggcggcggctgacccagaagctcctctccctgaaactccaggagaagggtttg
gagcagcagctggtgaacctcctgctcgagctctctgctgaccagtacgtgccaatcttc
gctcaccaccgaatatccttggaaatgctcggcaccatgagtgccagtgacctggaaaag
ctcggtgtgacagaggctggtctgcagcatgccatcctcagacgggctcaggagatcctg
gctgtggccgcgaccatcccagagctgcggagggaggaggacaccgcggtccctgcggcc
ccagagcccagcgctcccccggaggagcccgcgggccccacggcccctccgctgccgtgg
gacgagaagaagtcggagtgcgttgtgtgcatggagcaggagccccagacgattttcctg
ccctgtggccacgtctgctgctgccagggctgctgcgagcggctgcactcgtgtcccctg
tgccgccgggacatcgcgcagcgcatccgcatcttccagagcgcatag
DBGET
integrated database retrieval system
