Corvus brachyrhynchos (American crow): 103619784
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Entry
103619784 CDS
T08418
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04010
MAPK signaling pathway
cbrc04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103619784 (CACNA1B)
04020 Calcium signaling pathway
103619784 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbrc04040
]
103619784 (CACNA1B)
Ion channels [BR:
cbrc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
103619784 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
103619784
NCBI-ProteinID:
XP_017595775
LinkDB
All DBs
Position
Unknown
AA seq
2200 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQTGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGEEVGDFPCGEEPPARQCESGTTCREYWQGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAAIKKSKNDLI
HAEEGEDHFTDICSVGSPFARASLKSGKNESSSYFRRKEKMFRFFIRRMVKAQSFYWVVL
CVVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGLFLTEMSLKMYGLGPRNYFHSSFNCF
DFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSI
ISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQILTGEDWNAVM
YHGIESQGGVHSGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEAT
NQKLALQKAKEVAEVSPMSAANISIAAFVKQTRGTVSRSSSVSSVNSPKQQNSSKSKSVW
EQRTSQIRMHNFRASCEALYNELDPEERVRYATTLHIRPDMKTHLDRPLVVEPRSEGRNN
ITKLSPVDVQEVVEHPKVTSADGAEAPRKHHRHRDKEKLGEQEKGDVTKDEGGETSVGNK
EERHRQPRSGGTGAATGARGERRSRHRGGSRSGNRDGELGAKGDNGEEPHRRQRLRNRAL
STYESVEKDNGEKEGEAGEKEHRNHQPKENQCELEASGSGSVPGSVPVHTLPSTYLQKVP
EQPEDADNQKNVTRMIQPPLDKTTTVNIPVTITAPPGDTTVIPMNNVEFESKTEEKKDVD
DLTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAEDPVQ
AESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAF
AFSSFMGGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYM
LFMFIFAVIAVQLFKGRFFYCTDESKELEKDCRGQYLDYEKNEVEAQPREWKKYEFHYDN
VLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYRMEMSIFYVVYFVVFPFFFVNI
FVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKMWKFVVS
PPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFGVLNY
FRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQGYTIRILLW
TFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDETSINRHNNFRTFLQALMLLFR
SATGEAWHEIMLSCLSNRACDPLSGLTKKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIM
DNFEYLTRDSSILGPHHLDEFVRVWAEYDPAACGRISYTDMYEMLRHMSPPLGLGKKCPA
RVAYKRLVRMNMPISPEDLTVHFTSTLMALIRTALEIKLASGGVKQHQCDAELRKEISLV
WPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKNSREQVQPAGGLCQPGPVSL
FHPLKATLEQTQPAAFSNAKAFLRQKSSASLNNGGALPPPEGGIKESSSWGTQRTQDVFY
ETRSPAFERGHSEEIPIERVVEMKEISPTVANGEPQPGLESQGRAASMPRLAAETQPIPD
TSPMKRSVSTLTPQRPHAMHLYEYSLERMPPEQGHHHHHHRCHRRKEKKQKSLDRAAHHL
ADGQAVAQSGESSSKDKKQERGRSQERKQHSSSSSEKQRFYSCDRYGSRDRAQPKSADQS
RPTSPNGGPEHGPHRQGSGSVNGSPLLSTSGASTPCRGRRQLPQTPLTPRPSITYKTANS
SPVHFTTFQTPTQMEEEGSLLLGRAAGGAHPSLPPPHCLV
NT seq
6603 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtttggggatgatctgccaacccgctatggaggtggagggccggccggggct
ggaagagggagcagccggcaaggtggcccccaaaccggccagaggatgtataaacagtcg
atggctcagagagccaggactatggctctctacaaccccatccctgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataatgttatacggaaatacgcc
aagcgaataacagagtggcctccatttgaatacatgattttagctacaatcatagccaat
tgtatcgtgctggctctggaacaacatttgccggatggagacaagacaccgatgtcagag
agattggacgacactgagccgtactttattggaatattttgttttgaagctggtatcaaa
atcatcgctctgggctttgttttccacaaaggctcttacctgcggaatggctggaacgtg
atggattttgtcgtggtcctcacagggattctggcgactgctgggactgattttgacctg
cggaccctgcgagccgtgcgggtgctgcggcccctgaaactcgtgtcgggaatcccaagc
ctgcaggttgtcctcaagtccatcatgaaggccatggtgcccttgctgcagattgggctg
ctcctcttcttcgccatcgtgatgtttgccatcatcgggctggagttctacatgggcaaa
ttccataaaacctgtttttccaacgagacaggtgaggaggtgggagattttccctgtgga
gaggagcctcctgccaggcagtgtgagagcgggaccacgtgcagggagtactggcagggc
cccaactatggcatcaccaactttgacaacatcctcttcgccgtgctcacggtcttccag
tgcatcaccatggagggctggaccgacatcctctacaacacaaacgacgctgcaggaaat
acctggaattggctttacttcatccctctcatcatcattggctctttcttcatgctcaac
ttggtgctgggcgtcttatcaggtgaatttgccaaagaacgagagagggtggagaaccgc
cgggcgttcctgaagctccgcaggcagcagcagatcgagcgggagctcaacgggtacctg
gagtggatcttcaaagcagaggaggtcatgctggccgaggaggacaagaacgcggaggag
aagtcccctctggacgtgttgaaaagagccgcaataaagaagagcaaaaacgacctgatt
catgcagaagaaggtgaggaccatttcacagacatttgctccgttgggtctcccttcgcc
cgtgccagtttgaagagtggcaagaacgagagctcgtcctacttcaggaggaaggagaag
atgttccgcttcttcatccggcgcatggtgaaggctcagagcttctactgggtcgtgctc
tgcgtggtggccctcaacaccctctgtgtggccatggtgcactacgaccagcccgagaag
ctcaccacggctctctatttcgcagagtttgtttttctggggctgttcctcaccgagatg
tctctgaagatgtacggcctggggccaaggaactacttccactcttcattcaactgcttt
gactttggggtcatcgtgggcagcatttttgaggtcatttgggctgcagtgaagccggga
acctcctttggcatcagcgtcctgagagccctgcgcctgctgaggattttcaaagtgaca
aagtactggaattccctgaggaatctggtggtctccttgctgaactccatgaaatccatc
atcagtttgcttttcctgctcttcctgttcatcgtggtcttcgctctgctggggatgcag
ctctttggaggacagttcaatttccaagatgaaactccaaccaccaatttcgataccttc
cctgctgccatcctcacagtcttccagatcctgacgggggaagactggaacgctgtgatg
taccacgggatcgagtcgcagggcggcgtccactcgggaatgttctcctccatctacttc
atcgtcctcaccctgtttggtaactatactctgctgaacgtcttcttggccatcgctgtc
gacaacctggccaacgcccaggagctgaccaaggacgaggaggagatggaagaagccacc
aaccaaaagctggccctgcagaaggccaaggaagtggccgaagtgagccccatgtccgcg
gccaacatttccatagctgcttttgtaaagcaaactcgaggtactgtatctcgcagctcg
tcagtctccagcgtaaattcacccaagcagcagaattcctccaaatccaagtcggtttgg
gagcagaggacgagccagatccggatgcacaacttccgagccagctgcgaggccctgtac
aacgagctggaccccgaggagcgggtgcgctacgccaccaccctgcacatccggcccgac
atgaaaacccacctggaccggccgctggtcgtggagccccgcagcgaaggcaggaacaac
atcaccaagctgagccccgtggatgtccaggaggtggtggagcaccccaaagtcacctca
gctgacggggcagaagcaccacggaagcaccaccggcatcgggataaggagaagctggga
gagcaggagaagggcgacgtgaccaaggatgagggcggcgaaaccagcgtgggcaacaag
gaggagcggcacaggcagccccggagcgggggcaccggcgccgccaccggcgcccgcggc
gagcggcgctcccggcaccgcggcggctccaggtccgggaacagggatggagagctcgga
gccaagggcgacaacggagaggagccacaccggcggcaacggctcaggaacagggcgctg
tccacctacgagtccgtggagaaggacaacggcgagaaggagggcgaggctggcgagaag
gagcaccgcaatcaccagcccaaggagaaccagtgtgagctggaggccagtggcagtggg
agtgtccctgggagtgtccctgtgcacaccctgcccagcacatacctgcagaaggtgccc
gagcagccagaggatgctgacaaccagaagaacgtgacgaggatgattcagcccccgctg
gacaaaaccaccactgtgaacatccctgtcaccatcacggcccctccaggggacaccact
gtcattccaatgaacaacgtggagtttgaaagcaaaacagaggagaagaaagacgtcgat
gacttgacgaaaaatgggcctaaaccgatcctgccttacagttccatgtttatcctcagt
cccacaaatccgatccggcgcctgttccactacatcgtcaacctgcgctactttgagatg
gtgatcctgatcgtcatcgccctcagcagcatcgccctggctgcagaggaccccgtccaa
gctgagtctcccaggaatgacgctctgaaatacctggattatatattcacaggagtcttc
acctttgagatggtgatcaagatgatcgacttggggctgctgctccaccccggctcctac
ttccgtgacctgtggaatatcctggacttcattgtggtcagtggggccttggtggctttt
gccttctcgagtttcatgggaggaaccaaaggcaaggacatcaacaccatcaagtccctg
cgagtcctgcgggtgctccggcctctgaagaccataaaacggctgccaaagctaaaggct
gtctttgactgcgtggtgaactccctgaagaacgtcctcaacatcctcatcgtgtacatg
ctcttcatgttcatcttcgccgtcatcgccgtgcagctcttcaagggccgcttcttctac
tgcacggacgagtccaaggagctggagaaggactgcaggggtcagtacctggattatgaa
aaaaatgaggtggaggcacagcccagggaatggaaaaaatacgagttccactacgacaac
gtgctctgggctctgctcacgctcttcaccgtgtccacaggggaagggtggccaactgtg
ctgaagcactcagtggatgccacctacgaggaacaggggcccagccctggctaccgaatg
gaaatgtccatcttttacgtggtgtattttgttgtcttcccttttttctttgtcaacatc
tttgtggcgttaatcatcatcaccttccaggagcaaggagataaagtgatgtcagagtgc
agcctcgagaaaaacgagagggcctgcatagactttgccataagtgccaagcccctgacc
cgctacatgcctcagaacaagcaatccttccagtacaagatgtggaaattcgtggtgtcc
cctccctttgagtattttattatggtcatgatcgctctcaacaccatcgtcctcatgatg
aagttctatgatgctccagaagcatacgaggaaatgctgaaatgcctgaacattgtgttt
acatccatgttttccatggaatgtgtgctgaagatcattgcctttggtgtgctgaattat
ttccgagatgcctggaatgtctttgattttgtaacagtgttgggaagtattactgatatt
ttagtaacagagattgcggacacggacaacttcatcaacctcagcttcctgaggctcttc
agggcagccaggctcatcaagctcctccgccagggctacaccatccgcatcctgctctgg
acattcgtgcagtccttcaaggccttgccttatgtgtgtctcctcattgcaatgctcttc
ttcatctatgccattattggcatgcaggtatttgggaacattgccttagatgatgaaacc
tccattaatcggcacaacaacttccgaaccttcctccaagccctgatgctcctgttcagg
agtgccacgggggaagcctggcacgagatcatgttgtcctgcttgagcaacagagcctgt
gaccccctctctggcctcaccaaaaaggagtgtggcagtgattttgcctatttctacttc
gtgtccttcatcttcctctgctccttcctgatgctgaacctgttcgtggctgtgatcatg
gacaatttcgagtacctgaccagggactcctccatcctcgggccccaccacctggacgag
tttgtccgggtgtgggctgagtacgaccccgcagcctgcgggcgcatcagttacacagac
atgtacgagatgctgagacacatgtccccacctctaggccttgggaagaaatgcccagct
cgcgttgcctataagcgcctggtgaggatgaacatgcccatctcgcccgaggatttaacc
gtgcacttcacctccacgctgatggccctgatccgcactgccctggagatcaaactggcc
tcaggcggggtgaagcagcaccagtgcgatgctgagctgaggaaggagatctcgctggtt
tggcccaacctgtcccagaaaactctggatttgctggtgcctcctcacaaaccggatgaa
atgactgtggggaaggtctacgcagccctgatgatatttgacttctacaagcagaataag
aacagcagggagcaagtccagcccgctgggggcctgtgccagcccgggccagtgtccctc
ttccaccccttgaaggccaccctggagcagacccagcccgcggccttcagcaacgccaag
gccttcctgcggcagaagagctcggcctccctcaacaacgggggagccttgccacccccg
gagggagggatcaaagagtccagttcttggggaacccagcgcacccaggacgtgttttat
gaaaccaggagcccggcttttgagcgaggccactccgaggagatccccattgagagggtg
gtggaaatgaaggagatcagccccacagttgccaacggagagccccagccaggcctggag
agccagggccgggcggcctccatgccacgcctggctgccgaaacccagcccatcccggac
acgagccccatgaagcgctcggtctccacgctgacccctcagcgccctcacgccatgcac
ctctacgagtattccctggagcggatgcctccggagcaaggccaccaccaccaccaccac
cgctgccaccggcggaaagagaagaagcagaaatccttggatagggccgcccatcacttg
gctgatggacaagctgtagcccagtctggagagtcttcttccaaggacaagaagcaggag
cgtggccgctcccaggagaggaagcagcactcctcctcctcgtctgaaaagcagcgcttc
tactcctgcgaccgctacggcagccgggaccgtgcccagcccaaatctgctgaccagagc
aggcccacttcccccaacgggggcccagagcacggcccgcacagacagggcagtggttca
gttaatgggagccccttgctgtcgacatctggtgctagtaccccctgccggggtcggagg
cagctcccacagactccactgaccccacgccccagcatcacttacaagaccgctaactcc
tcgcccgtgcacttcaccactttccaaacccccacacagatggaggaagaaggctccctc
cttctggggagggcagcgggaggagcacatccctctctgccccctccccactgccttgtc
tag
DBGET
integrated database retrieval system
