KEGG   Corvus brachyrhynchos (American crow): 103619829
Entry
103619829         CDS       T08418                                 
Symbol
OPTN
Name
(RefSeq) optineurin isoform X1
  KO
K19946  optineurin
Organism
cbrc  Corvus brachyrhynchos (American crow)
Pathway
cbrc04137  Mitophagy - animal
cbrc04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    103619829 (OPTN)
   04137 Mitophagy - animal
    103619829 (OPTN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cbrc04131]
    103619829 (OPTN)
Membrane trafficking [BR:cbrc04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    103619829 (OPTN)
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    103619829 (OPTN)
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    103619829 (OPTN)
  Xenophagy
   Cargo receptors
    103619829 (OPTN)
SSDB
Motif
Pfam: CC2-LZ NEMO zf_C2H2_10 EDR4-like_1st
Other DBs
NCBI-GeneID: 103619829
NCBI-ProteinID: XP_017595892
LinkDB
Position
Unknown
AA seq 517 aa
MLQQMKELITENNELKEAMKLHNQAMKDRYEELSTWREKQKEEREFYELKFKEAKQCLQA
KCIENEQLQQQLQSLKEREEGAEMEGYMAPEKEVRQLKSQVQRLQAEKADLLAIISELQV
KLNISAEDSFVEIGMNEGEINRTAKEHQENSGEMPSNDAVYIRSKSADESKNLESEELTV
SQLLCCLRNETQKREKLEKELQDHKERLSKLEKETRSCLESGTQTEQEEENSEAVGSEVE
TLNLQVCALFKELQEAHEKLTEAELIQKKLQEKCQVLERKSLAAASELEEKQQLIYTIKK
LELQVESMQAEVKLEQAKTHEEKARYNNLQDSYSKLLPELTEAMKKIDEMKLKELNKVDK
DVVEQLTAKVELAEQALAAKQLQIDEMKQLIAKQEEDLETMSVLRAQMEVYCSDFHAERA
AREKIHEEKEQLAVQLAYLLKEQQNLEDLSRTSLAEMQSRHGARMPDREHSPHLVQRGTN
SQDWQEQQNISVYSCPKCEEILPDLDTLQIHVMDCIN
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgttgcagcagatgaaagaattaatcactgagaacaatgagttaaaagaagccatgaag
ttgcacaaccaagctatgaaggaccgttatgaggaactttccacctggagagagaagcag
aaagaagaacgagaattttatgagttaaagtttaaggaggcaaagcagtgcttgcaggcc
aagtgcattgaaaatgaacagctacagcagcaacttcagagcttaaaggaaagagaagaa
ggagctgaaatggagggctacatggctcctgagaaggaagtgaggcagctgaagtcccag
gtgcagcggctccaggctgagaaggcagatctgctcgccatcatttcagagctgcaggtc
aagctgaacatctcagcagaggattcctttgtggagattgggatgaacgaaggggaaata
aatagaactgcaaaggaacatcaagagaatagtggtgaaatgcccagtaatgatgctgtc
tacatcaggagcaaatctgctgatgaatctaagaatttggagtctgaggagctaactgtg
agccagctgctctgctgccttagaaatgaaactcagaagagggaaaaacttgagaaggaa
ctgcaggatcacaaagagagactgtcaaagctggagaaggaaaccaggagctgcctggag
agtgggacacaaactgaacaggaagaagagaattcagaagctgttggcagtgaagtagaa
accctgaacctgcaagtttgtgctctgtttaaagagctccaggaagcccatgagaagtta
acagaagcagaattgattcagaagaaacttcaagaaaagtgccaggtactggaaaggaaa
agcttggctgctgcatcagaattggaggagaagcagcagctaatatataccatcaagaag
ctggaacttcaggtggagagtatgcaggcagaggtcaagctggaacaagccaagacacat
gaagaaaaggcaagatacaataacctccaggattcatatagcaaactccttccagaactc
actgaggcaatgaaaaaaattgatgaaatgaaactcaaagagctgaacaaagtggataaa
gatgtggtggaacaactgacagcaaaggtggagttggcagaacaagcccttgctgcaaag
cagctccagatagatgaaatgaagcagctaattgctaagcaagaggaggaccttgaaact
atgtctgtgctccgtgctcagatggaggtttattgttctgatttccatgctgagagggca
gcgagagagaagatccatgaggagaaggagcagttggctgtccagctggcatacctgcta
aaagaacagcaaaaccttgaggatcttagccgaacctctctggcagagatgcagagtcgc
cacggagccaggatgccggatcgggagcactcgcctcaccttgtccaaagaggaaccaat
agtcaagactggcaagagcagcagaatatttcagtttattcatgtcctaaatgtgaagaa
attctacctgatttggacactctgcagattcacgttatggactgcattaactga

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