Corvus brachyrhynchos (American crow): 103620120
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Entry
103620120 CDS
T08418
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cbrc04812
]
103620120 (KATNB1)
Cytoskeleton proteins [BR:
cbrc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
103620120 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_TEP1_C
Beta-prop_SCAP
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_HPS5
eIF2A
WD40_RFWD3
Beta-prop_VPS8
RMC1_N
Beta-prop_pof12
PROPPIN
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Tricorn_2nd
Beta-prop_RIG_1st
Beta-prop_LRRK2
Beta-prop_IP5PC_F
Beta-prop_ACSF4
VPS8_N
Beta-prop_WDR11_1st
WD_LRWD1
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
103620120
NCBI-ProteinID:
XP_008636933
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MAVAGTTKTAWKLQEIMAHSSNVSSVVLGKGSGRMLATGGDDCRVNIWSVSKPNCIMSLT
GHTTPIESLQVNPNEKLIVAGSRSGSIRVWDLEAAKVLRTLPGHKANICSLHFHPFGSFV
ASGSLDTNIKLWDVRRKGCIFTFKGHTEAVRCLRFSPDGKWVASAADDHTVKLWDLTAGK
LMFEFTGHTGPVNVVEFHPNEYLLASGSSDRTVRFWDLEKFQVVSCIEEEATPVRCVLFN
PDGCCLYSGFQDSLRVYGWEPERCFDVVLVNWGKVADLSISNNQLIGVSFAQSTVSSFVV
DLSRVPKSDSIPHGLIRDDQPLVPPTPTGSSLRRIYDRPSTSCSKPQSRVKHNSESERHS
PSSEDDRDEKESKAEIQNQEDYKEIFQPKNAICRTPPRNEPFPAPPEDEPGTAKEAVKPS
QAADVQTSLPKQELPDPVQRPAIASSTSLSRTEPSVIPAARNEPIGLKASDFLPAVKNQS
QTELVDEEAMSQIRKGHETMCVVLTSRHKNLDTVRAVWSTSDIKNSLDSAVAINDLSVVV
DLLNIVNQKASLWKLDLCTIVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILA
APPSVGVDISREERLHKCKLCYKQLKNISNVVKNKSGLSGRHGSAFRELLLLMAVLD
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggccggcaccacgaagacggcatggaagctgcaagaaatcatggcccacagc
agcaatgtatcctcagtagtcctgggaaaaggttcaggccggatgctggccactggaggt
gatgactgtcgggtcaacatatggtcagttagcaagcccaactgcatcatgagcttgact
ggccacacaacccccatcgagagcctacaggtcaacccaaatgagaagctcatagttgca
gggtcccggtcaggatccattcgagtttgggacctggaagctgccaaagttcttcgtacc
ttaccaggtcacaaagcgaatatctgcagccttcatttccatccttttggaagctttgtg
gcatctggctccttggacaccaacattaagctctgggatgtaagaagaaaaggctgtatc
ttcacattcaagggtcacacagaagcagttcggtgtctccgctttagccctgatgggaaa
tgggtggcctctgctgctgatgatcacactgtaaagctgtgggatctgactgctgggaag
ttaatgtttgagtttacaggacataccggcccagtaaacgttgttgaattccatcccaat
gaataccttttggcttctggcagctctgacaggactgttcggttctgggacttggagaag
tttcaagttgtgagctgtattgaagaggaagctactcctgtcaggtgtgtgctcttcaac
ccagatggctgctgcttgtacagcggcttccaggattcgctgcgtgtgtacggctgggag
ccagagcgctgttttgatgtggtcttggtgaactggggaaaagtagctgacttgtctatc
agcaacaaccagctgataggagtttcctttgcacaaagcacagtctcttccttcgttgtg
gatctcagcagagtcccaaagtcagattctattcctcatgggttgatcagggacgaccag
cctcttgtgccacctacccccacagggtcctcccttcgccgcatctatgacaggccctca
acgagctgcagcaagccacagagcagagtgaagcacaattcggagagtgagaggcacagt
cctagcagtgaagatgaccgggatgagaaggaatcaaaggctgagatccagaaccaggag
gattacaaagagatcttccagcccaagaatgcgatctgccgaactcctcctcgaaatgag
ccctttccagcccctcctgaggatgagcctggaactgcaaaggaagcagtgaagcccagc
caagctgcggatgtccagacctcgttgccaaagcaagagctccctgatccagtccagagg
ccagcgattgcctcctcaacttctttgagcagaacagagccatcagtgattccggcagcc
aggaatgagcccattggcctgaaggcctctgactttctcccagctgtgaaaaaccaaagc
cagacggagctggtggatgaggaagccatgtcccagatcaggaaaggccacgagaccatg
tgtgtggtgctcaccagccgccacaagaacctggacaccgtgcgggctgtatggagcacc
agtgacatcaagaactctctggactctgcagtggcaatcaatgatctgtctgttgtcgtg
gatctcttgaatattgtcaaccaaaaagcgtctctctggaagctggatttgtgtactata
gtcctgccgcagatagaaaaactgctccaaagcaaatacgaaagttacgtgcagactggc
tgcacatccctgaagctcattctccagagattcctgccactcatcacagacatccttgct
gcaccaccttctgttggagtggacatcagcagagaggaaaggcttcacaaatgcaagttg
tgctacaagcagctgaaaaacatcagcaatgttgttaagaacaagtctgggctcagcggc
cgccatggtagtgcctttcgggaactgcttctcctcatggctgtcctggactaa
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