KEGG   Corvus brachyrhynchos (American crow): 103620166
Entry
103620166         CDS       T08418                                 
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
cbrc  Corvus brachyrhynchos (American crow)
Pathway
cbrc04137  Mitophagy - animal
cbrc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103620166 (AMFR)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    103620166 (AMFR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cbrc04121]
    103620166 (AMFR)
Enzymes [BR:cbrc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     103620166 (AMFR)
Ubiquitin system [BR:cbrc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103620166 (AMFR)
  Multi subunit type E3
   ERAD complex
    103620166 (AMFR)
   LMBR1L-GP78-UBAC2 complex
    103620166 (AMFR)
SSDB
Motif
Pfam: TPR_SYVN1_N G2BR zf-RING_2 zf-C3HC4_2 CUE zf-C3HC4 zf-C3HC4_3 zf-RING_11 zf-rbx1 zf-RING_UBOX zf-ANAPC11 zf-RING_5 zf-RING_16 Prok-RING_4 zf-C3HC4_4 zf-RING_Vps41 zf_RING_Vps8
Other DBs
NCBI-GeneID: 103620166
NCBI-ProteinID: XP_008636985
LinkDB
Position
Unknown
AA seq 547 aa
MLVAKLIQCMVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSGL
VFLHLMVQLCKDRFEYLSFSPTTPMSSHIRVLALLIAMLLSCCGLAVVCGVVGYTHGMHT
LAFMAAESLLVTVRTAHVILRYVVHLWDLNHEGTWEGKGTYVYYTDFVMELTLLCLDLMH
HIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELA
VNNDDCAICWDSMQSARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNITDSHHVREDHQ
RENLDENLVPVAAAEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQASNS
QLNVMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILEGRIQVPFPTQRADSIRPALN
NSVERHSTDQEDTGTVTQTERVPLELNSRLEEMVEFSEMDAEPNEAEDFEARGSRFSKSA
DERQRMLVQRKEDLLQQARKRYLNKTSDEELSTEKPLPEGATADAVTLRRRTLAAAAERR
LQMQQNS
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgctggttgctaagctaatccagtgtatggtgtttggtcctcttcgtgtcagcgagagg
cagcaccttaaggataaattctggaatttcattttctacaagttcatcttcatttttggt
gtgctgaatgttcaaacagtggaagaagtagtgatgtggtgcctctggttctctggactt
gtgtttctccatctgatggttcagctctgcaaggatcgctttgaatatctttccttttct
cccaccacacccatgagcagccacatcagagtactggccctgctcatcgccatgctcctg
tcttgctgtggattagcagttgtctgtggagttgttggctacacccatggcatgcacacg
ttggctttcatggcagcagagtctctgctggtgacagtcagaactgctcacgtgatttta
cgatatgtagttcatctctgggatctcaaccatgagggaacgtgggagggcaaaggcact
tatgtctactacacagattttgtcatggagctaaccttgctttgcctggacttgatgcat
catattcatatgctgctgtttggcaatatctggttgtcaatggcgagtctggtgatcttc
atgcagctgcgctacctgttccacgaggtgcagcggcgaattcggcggcacaagaactac
ctgcgtgtggttggaaacatggaagccagatttgcagttgcaacaccagaggagctggca
gtgaacaatgacgactgtgccatttgctgggactccatgcaatccgcacgtaaactccct
tgcggccacctcttccacaactcttgcctgcgttcctggctggaacaagacacatcttgc
cccacctgcagaatgtctcttaatatcactgacagtcatcacgtgagggaggatcaccaa
agggagaatctggatgagaacctggttcctgtggcagcagcagaaggcagaccacgcctg
aaccagcacaatcacttcttccactttgatggctcccgaattgccagctggctgcccagt
ttttccgtggaagtgatgcacaccaccaacatcctcggaattgcacaagccagcaactcc
cagctcaatgttatggcccatcagattcaggagatgttccctcaggttccttatcattta
gttctgcaggatctgcagctaactcgttctgtagagatcacgactgacaacatcctagaa
gggcgcatccaggtgcctttccccacacagcgtgcagatagcattagacctgcattgaac
aactctgtggaaaggcacagtactgatcaggaggatactggaactgtcacacagacagag
agagtgccacttgaactgaactccagactggaagaaatggtggaattcagtgaaatggat
gcagaacctaatgaagcagaagattttgaggccaggggaagtcgcttttccaagtcagct
gacgaaaggcagcgtatgttggttcagcggaaggaggacttgttgcaacaagctcgaaag
cgttacttaaacaaaacctccgatgaggagctgagcacagagaagcctttgcccgaggga
gcaacggccgacgccgtcaccctgcgccgcaggaccctcgctgccgctgctgaacggaga
cttcagatgcagcaaaactcttag

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