Corvus brachyrhynchos (American crow): 103620166
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Entry
103620166 CDS
T08418
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04137
Mitophagy - animal
cbrc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103620166 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
103620166 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbrc04121
]
103620166 (AMFR)
Enzymes [BR:
cbrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
103620166 (AMFR)
Ubiquitin system [BR:
cbrc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103620166 (AMFR)
Multi subunit type E3
ERAD complex
103620166 (AMFR)
LMBR1L-GP78-UBAC2 complex
103620166 (AMFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
zf-RING_Vps41
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
103620166
NCBI-ProteinID:
XP_008636985
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MLVAKLIQCMVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSGL
VFLHLMVQLCKDRFEYLSFSPTTPMSSHIRVLALLIAMLLSCCGLAVVCGVVGYTHGMHT
LAFMAAESLLVTVRTAHVILRYVVHLWDLNHEGTWEGKGTYVYYTDFVMELTLLCLDLMH
HIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELA
VNNDDCAICWDSMQSARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNITDSHHVREDHQ
RENLDENLVPVAAAEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQASNS
QLNVMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILEGRIQVPFPTQRADSIRPALN
NSVERHSTDQEDTGTVTQTERVPLELNSRLEEMVEFSEMDAEPNEAEDFEARGSRFSKSA
DERQRMLVQRKEDLLQQARKRYLNKTSDEELSTEKPLPEGATADAVTLRRRTLAAAAERR
LQMQQNS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgctggttgctaagctaatccagtgtatggtgtttggtcctcttcgtgtcagcgagagg
cagcaccttaaggataaattctggaatttcattttctacaagttcatcttcatttttggt
gtgctgaatgttcaaacagtggaagaagtagtgatgtggtgcctctggttctctggactt
gtgtttctccatctgatggttcagctctgcaaggatcgctttgaatatctttccttttct
cccaccacacccatgagcagccacatcagagtactggccctgctcatcgccatgctcctg
tcttgctgtggattagcagttgtctgtggagttgttggctacacccatggcatgcacacg
ttggctttcatggcagcagagtctctgctggtgacagtcagaactgctcacgtgatttta
cgatatgtagttcatctctgggatctcaaccatgagggaacgtgggagggcaaaggcact
tatgtctactacacagattttgtcatggagctaaccttgctttgcctggacttgatgcat
catattcatatgctgctgtttggcaatatctggttgtcaatggcgagtctggtgatcttc
atgcagctgcgctacctgttccacgaggtgcagcggcgaattcggcggcacaagaactac
ctgcgtgtggttggaaacatggaagccagatttgcagttgcaacaccagaggagctggca
gtgaacaatgacgactgtgccatttgctgggactccatgcaatccgcacgtaaactccct
tgcggccacctcttccacaactcttgcctgcgttcctggctggaacaagacacatcttgc
cccacctgcagaatgtctcttaatatcactgacagtcatcacgtgagggaggatcaccaa
agggagaatctggatgagaacctggttcctgtggcagcagcagaaggcagaccacgcctg
aaccagcacaatcacttcttccactttgatggctcccgaattgccagctggctgcccagt
ttttccgtggaagtgatgcacaccaccaacatcctcggaattgcacaagccagcaactcc
cagctcaatgttatggcccatcagattcaggagatgttccctcaggttccttatcattta
gttctgcaggatctgcagctaactcgttctgtagagatcacgactgacaacatcctagaa
gggcgcatccaggtgcctttccccacacagcgtgcagatagcattagacctgcattgaac
aactctgtggaaaggcacagtactgatcaggaggatactggaactgtcacacagacagag
agagtgccacttgaactgaactccagactggaagaaatggtggaattcagtgaaatggat
gcagaacctaatgaagcagaagattttgaggccaggggaagtcgcttttccaagtcagct
gacgaaaggcagcgtatgttggttcagcggaaggaggacttgttgcaacaagctcgaaag
cgttacttaaacaaaacctccgatgaggagctgagcacagagaagcctttgcccgaggga
gcaacggccgacgccgtcaccctgcgccgcaggaccctcgctgccgctgctgaacggaga
cttcagatgcagcaaaactcttag
DBGET
integrated database retrieval system