Corvus brachyrhynchos (American crow): 103620206
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Entry
103620206 CDS
T08418
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X3
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04142
Lysosome
cbrc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103620206 (VPS35)
04142 Lysosome
103620206 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbrc04131
]
103620206 (VPS35)
Membrane trafficking [BR:
cbrc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
103620206 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
VPS35L_N
FerA
Motif
Other DBs
NCBI-GeneID:
103620206
NCBI-ProteinID:
XP_008637030
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MKRCLDKNKLMDALKHASNMLGELRTSMLSPKSYYELYMAISDELHYLEVYLTDEFAKGR
KVADLYELVQYAGNIIPRLYLLITVGVVYVKSFPQSRKDILKDLVEMCRGVQHPLRGLFL
RNYLLQCTRNILPDEGEQADEETTGDISDSMDFVLLNFAEMNKLWVRMQHQGHSRDREKR
ERERQELRILVGTNLVRLSQLEGVNVERYKQIVLPGILEQVVNCRDALAQEYLMECIIQV
FPDEFHLQTLNPFLRACAELHQNVNVKNIIIALIDRLALFAHREDGPGIPADIKLFDIFS
QQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIA
TSSAVSKELTRLLKIPVDTYNNILTVLKLKHFHPLFEYFDYESRKSMSCYVLSNVLDYNT
EIVSQEQVDAIMNLVSTLIQDQPDQPTEDPDPEDFADEQSLVGRFIHLLRSDDPDQQYLI
LNTARKHFGAGGNQRIRFTLPPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTIS
ALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAIT
LIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQCRAVSTCAHLFWSGRNTDKNGEE
LHGGKRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENEAVTIQVLNQLIQK
IREDLPNLESTEETEQINKHFHNTLEHLRLRRESPESEGPIYEGLVL
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaagagatgcttggacaagaacaagctcatggatgctctgaaacatgcttccaacatg
cttggggagctgcggacttctatgttatctccaaagagctattatgagctctacatggca
atttctgatgagctgcactacttggaagtctacctgacagatgaatttgccaaaggcagg
aaagtggcagacctttatgagctagtacagtacgctggaaatatcattccaagactgtat
ctgctgataacagtaggtgttgtctatgtcaagtcgtttccacagtccaggaaagatatt
ttgaaagacctggtggagatgtgccgtggagtgcagcatcctcttagaggcctctttctt
agaaactatctcctgcagtgtaccaggaatatcttaccagatgaaggcgagcaagcagat
gaagaaaccactggagacatcagtgactcgatggattttgtgctgctgaactttgctgag
atgaacaaactctgggtgcgaatgcagcaccagggccacagtcgggacagagagaaaagg
gagcgtgagaggcaggagctgaggatcctcgtgggaacaaacctggttcgcctcagtcag
ctggaaggggttaatgtggagagatacaagcagattgttctgcctggaatactggagcaa
gttgtgaattgtagagatgctttagctcaggagtacctcatggagtgcatcatacaggtt
ttcccagatgaatttcacctccaaaccctgaacccatttctcagagcctgtgctgagctg
caccaaaatgtgaatgtgaaaaatataattattgctttaattgacaggttggctttattt
gcacatcgtgaagatggacctggtatcccagcagatatcaaactgtttgacatcttttca
cagcaggttgctactgttatacagtctcggcaggatatgccctcagaggatgtggtgtct
ttgcaagtttctctcattaacctggctatgaaatgctacccagatcgagtggactatgtt
gacaaggtgttggagactactgtggaaatattcaacaaacttaatctggaacatattgca
acaagcagtgctgtttcaaaggagctgactagacttttgaaaatccctgttgatacttac
aacaacatcctgacagttctgaaactaaagcattttcacccgctctttgaatactttgat
tatgagtccaggaagagcatgagttgttatgtgcttagcaacgtattggattataacaca
gaaattgtgtcccaagaacaggttgatgccatcatgaatttggtctccaccctgatccag
gatcaaccagatcagcctactgaagatcctgaccctgaggactttgctgatgagcagagt
cttgtgggaagatttattcatctcctgcgttctgatgaccctgaccaacagtacctgatc
ctcaacactgcccggaagcacttcggggcaggggggaaccagcgcattcgtttcacactg
ccacccttggtttttgctgcctaccagctcgcttttcgctacaaagagaactccaaagtg
gatgacaaatgggaaaagaagtgccagaagatcttctcatttgctcatcagaccatcagt
gctctgatcaaagcagaactggcagagctgcctctccgactcttcctgcagggagcactg
gctgcgggagagattggctttgagaatcatgaaactgtggcctatgagttcatgtcccag
gccttctctctgtatgaagatgaaatcagtgactcaaaagcacagctggctgcaatcacc
ttgataattgggacatttgagaggatgaagtgcttcagtgaggagaaccacgagcctttg
aggactcagtgtgcactggcagcctccaaactcctgaagaagccagaccagtgcagagct
gtgagcacttgtgcccatctgttctggtctggccgaaacactgacaagaatggagaggag
cttcatggaggaaaaagagtgatggaatgcctaaagaaggctctgaagatagcaaatcag
tgcatggacccttctctgcaagtccagcttttcatagaaattctgaatagatacatctat
ttttatgaaaaagagaatgaggcggtgacaattcaggttttgaatcagcttatacagaag
atcagagaagatctcccaaaccttgagtctactgaagaaacagaacaaattaacaaacac
tttcacaacacactggagcacttgcgtctgaggagggaatcaccggaatctgaggggcca
atttatgaaggtcttgttctttag
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