Corvus brachyrhynchos (American crow): 103620739
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Entry
103620739 CDS
T08418
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X2
KO
K10140
DNA damage-binding protein 2
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03420
Nucleotide excision repair
cbrc04115
p53 signaling pathway
cbrc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103620739 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
103620739 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
103620739 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbrc04121
]
103620739 (DDB2)
03400 DNA repair and recombination proteins [BR:
cbrc03400
]
103620739 (DDB2)
Ubiquitin system [BR:
cbrc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103620739 (DDB2)
DNA repair and recombination proteins [BR:
cbrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103620739 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
WD40_RFWD3
PEP5_VPS11_N
Frtz
Motif
Other DBs
NCBI-GeneID:
103620739
NCBI-ProteinID:
XP_008637653
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MAGRQQPPLQVLGEVLVPPSVLGSDRMSPVNQPKDKKRERACQHWPEEAKSAGKRKRDYG
ERGNEKQEKRLFVRKTSKPSGKIGCSGGGFVMRNKRVLSSQLERRCSIVHYVYQKMLGGP
IQAQLRQRLELAFLRSLSSYCLFRRASPFDRRVTCLEWHPTHPSTLAVGSKGGDIILWDC
EVLAKTCFIKGKGPGDSLGDIKFSPYEAEKLYVASGDGTLSLQDLEGRAVQVISRALDCG
HEHHNVCCWYCSVDVSASCHAVVTGDNVGNVVLLSTSGEEIWKLKLHRKKVTHVEFNSRC
EWMFATASVDQTVKIWDLRNIKNKTNFLHLLPHEKPVNAAYFSPTHGAKLLTTDQHNEIR
VYSSSDWTKPLHLIPHPHRQFQHLTPIKATWHPRYDLIVVGRYPDPKFPGYTPSELRTVD
VFDGNTGEMVCQLYDPNASGIISLNKFNPMGDTLASGMGFNILIWNQEEMAAKKHEHLLK
AMTDKEIEP
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggccggcagacagcagcctcctttgcaggtgctgggggaagtgctggtacctccctct
gtgttggggtcagacagaatgtctccagtgaaccagccaaaggacaagaaacgtgagagg
gcatgtcagcattggccagaagaggcaaaatcagctgggaagaggaagcgggactatggg
gaacgagggaatgagaaacaagaaaagaggttgtttgtgagaaaaacatctaaaccatca
gggaaaatcggttgcagtggaggtgggtttgtgatgagaaacaagagagtcctttcctct
cagctggagcggcggtgcagcattgttcattatgtctaccagaaaatgctgggaggcccc
attcaggcacagctcaggcagaggctggaactggcttttctgcgttctctttcctcatac
tgcctctttcgaagagcaagtccctttgacaggagagtgacatgcctggaatggcaccca
acacaccccagtacactagctgtcggttccaaaggtggagacatcatcctttgggactgt
gaagtacttgctaaaacctgcttcataaaggggaaagggccaggagattctctcggagac
atcaagttcagtccttatgaggcagagaagctttatgtggcatcaggtgatggcacccta
agtctgcaggatcttgagggcagagcggtgcaggtgatctctcgtgccctggactgtggc
catgagcatcataatgtttgttgctggtactgcagtgtggatgtttctgcaagctgccat
gcagtggtgacaggtgataatgtgggcaacgtggtcctgctcagcacttctggtgaagag
atctggaagctgaaattgcacaggaagaaagtgactcatgtagagtttaactcccgatgt
gagtggatgtttgccacagcatctgtggatcagacagtcaaaatctgggacctcagaaac
atcaaaaacaaaacaaactttcttcatctgcttccacatgagaaacctgttaatgcagct
tacttcagcccaacacatggtgccaagcttttgaccacagaccagcacaatgaaatcagg
gtttactcatcttcagactggaccaagccactgcatctgattccacatccacataggcag
tttcagcacctcacacctattaaggcaacgtggcatcctcgctatgacctcattgtggta
ggtcgctacccagaccccaagttccccgggtacacgccgagcgagctgcgaactgtggat
gtgtttgatggaaacactggcgagatggtttgtcagctctacgatccaaatgcttctggc
atcatctcgctcaataaatttaaccctatgggagacacactggcttctggcatgggcttt
aatattctgatctggaaccaagaggagatggcggccaagaagcatgaacatcttttgaaa
gccatgacagacaaggagattgaaccatga
DBGET
integrated database retrieval system
