Corvus brachyrhynchos (American crow): 103620758
Help
Entry
103620758 CDS
T08418
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04140
Autophagy - animal
cbrc04148
Efferocytosis
cbrc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103620758 (VPS18)
04148 Efferocytosis
103620758 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103620758 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbrc04131
]
103620758 (VPS18)
Membrane trafficking [BR:
cbrc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103620758 (VPS18)
Hops complex
103620758 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
zf-RING_16
zf-RING_5
zf-RING_11
zf-RING_UBOX
Lact-deh-memb
zf-ANAPC11
zf-RING_2
zf_RING_Vps8
Nup54_57_C
LETM1_C
STX17_N
DUF5600
zf-rbx1
DUF1664
Motif
Other DBs
NCBI-GeneID:
103620758
NCBI-ProteinID:
XP_008637679
UniProt:
A0A091F0B7
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLHRSVSVQQSRASVGIPHSGYVSARLEKETPIFNKQRIDFAPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTSQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAVHADHLPSFREFPANLGFSEIAFYTPKLRSSPRSFAWMMGNGVLYGTLDYS
RPDSILSDERVWVYPPDIDVTVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFL
EKFGSLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNL
KPSEKTQTTLLTTWLTELYLNWLGILQGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHRACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAATSQPSKSHHRPKDADTISLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggacgagtacgaggactccctgcaccgctccgtgtccgtgcagcag
agccgcgccagcgtgggcatcccgcactccggatatgtcagtgcacgactggagaaggaa
acaccaatatttaacaagcagaggattgattttgctcctccagagaaaattaacagctta
gtagtctcctctaaccagctctgtatgagccttgggaaagacacccttctcaggattgat
cttgggaagccagatgaacctaatcaggtagagctgggacgcaaagatgaagccaaagtc
tacaagatgtttttggaccacacaggctctcatctcctgattgctctcaacaccagcgaa
tgcctctacctgaacagaagtgttcagaaagtgcgggcactctcccgctggaaaggacac
ttgattgaaagtgtgggctggaacaaatttcttggttcagaaaccaacacaggacctatc
ctggtggggacatcccaggggcagatctatgaggctgaaatctctgtcagcgaaggaagc
ctcttcagcactaaccctgaccagtacttccgacaggtctacactctggaagaggaatct
ggacctgccccagtctgctgcttggaaattgaacgagggatagaagggaaattttttatt
atagccaccactaggaagagactctttcagtttgttggcaaagtgcctgaagggacagag
cagcaaggcttcagctccatatttgctgtgcatgctgaccatctgcccagctttcgggag
tttccagccaacttgggtttcagtgagattgccttttacactccaaaactgcgttccagc
ccgcgctcctttgcctggatgatgggaaatggggttttatatggtacattggattatagt
cgtcctgattcaattctgagtgatgaacgggtctgggtttatcctcctgatattgacgta
actgtgaacaagccaatatccattgtacttacccagttccacttcctgttgctgctgcct
gaccgtgtgaaggctgtctgcactctgaatggacaagttgtttttcaagatctgttcctg
gagaagtttggctcgctgacacgcatgattaaagatcccacagtccagcagatatggatc
cacactgagaaagtagtgttccgctaccatgtccagcgggaatctagagatgtgtggaag
atgtatatgaatatgaacaaatttgatctagcaaaagagtattgtaaggaccgtccagag
tgtcttgacatcgtgctggcaaaagaggcagagcactgcttccaaaacaagaggtatctg
gacagtgccaagtgttacgcgctgacccagaactacttcgaggaaattgctctgaagttc
attgaagccaagcaagaagaggccctgatggagtttctaattaagaagctaagtaaccta
aagccttcggagaagacacagaccactctgctgaccacatggttgacagagctgtacctg
aactggctgggtatattgcaaggagatccctctcagcgaaatctctatttggatacacgg
gagaagtttcgtactttcttgagcagtcctaaaaacaaagactgtctttttaataatcgg
gcatctatttatgagctgttggcaagccatggcgacacagagcacatggtctactttgca
gtcatcatgcaggattatgagcgtgtagtagctcaccactgccagcatgatgagtacgat
gaggctctaaatgtgctgtctaggcacagagatgagaaactcttctacaagttctctcca
gttctcatccagcatattcccaagaaggtagttgatgcttggatttctatgggctctaga
ctggatgccaggaacctcattccagcccttgttaactacagccagagtgccagcacccag
cagatcaatgaagctattagatacatggagttctgtgtctaccagctggaggaaacacag
caagccattcacaactacctgttgtctctttacgctttgtgtcggccggattcgctgctg
tcatacctggagcaagcaggaaccaaccccaacaggatccactacgacctgaagtatgca
ctgcgcttgtgtgcagagcacgggcaccaccgagcgtgtgtccacatttacaaagtgatg
gaattatatgaggaggctgtggatctcgccttacaggtggatgttgatcttgccaagtcc
tgtgcagatcttcctgaagatgatgaggaactccggaagaagctgtggttgaagatcgct
cgccatgttgttcaggaggagaaggatgtcaagaaggcaatggcctgcctctccagctgt
gctctgctgaagattgaagatgtcctgccattctttccagactttgtcactattgaccat
ttcaaggaggcaatctgtaactccctggaggactacaacaagcacattgaggagctgaaa
agggagatggaggaagccacacagagtgccaagaggatccgagaggacatccaggaaatg
agaaacaagtatggctctgtggagcctcaggaaaaatgtgctgcttgtgactttccactt
ctaaaccgccctttttaccttttcctgtgtggtcacatgtttcactatgactgtctcctc
caagcagttttcccaaaccttcctgcctataaacaggcaaaacttgaagatcttcagaag
aagctggcagctaccagccagccctccaagagccaccatcgtcccaaggatgcagatacc
attagcttggggaaggggcagcagagccgggaacagatcaaagctgacattgatgatatt
gtggcagctgaatgtgtgtactgtggtgagctgatgatccggtccattgacaagcctttt
attgatccccaaaagtacgaagaggagatgcaaagctggctgtag
DBGET
integrated database retrieval system
