Corvus brachyrhynchos (American crow): 103620806
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Entry
103620806 CDS
T08418
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03040
Spliceosome
cbrc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103620806
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103620806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbrc03041
]
103620806
Spliceosome [BR:
cbrc03041
]
Common components
Common spliceosomal components
SR proteins
103620806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
SET_assoc
Motif
Other DBs
NCBI-GeneID:
103620806
NCBI-ProteinID:
XP_008637751
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
MNSAVFFFSINLKMSGCRVFVGHLSSRARERDVEKFFKGYGRIREIHLKNGFGFVEFEDH
RDADDAIYELNGKELCDERVTIEHARARRGRGRFSQRFSYYQSQSGSSRYGPPVRTEHRI
IVENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRNEGVVEFASYSDMKSALEKLDGTELN
GRRIKLTEDHRRHRSRSRSRSYSRSRSRSRSTGSSRSDSRSRSRSRSRSRSRSRSRSRSR
SRSRSRSRSRTPKKSYSHKSHRSSLIASSPSPSSSKRKSRSRSSSAHSRS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtgctgttttcttttttagcatcaaccttaagatgagtggctgccgtgtcttt
gttggacacttgagctcacgtgctcgtgaacgggatgtagagaaattcttcaaaggatat
ggtcgcatacgagaaatccatctaaaaaatggttttgggtttgtggaattcgaagaccac
agggatgctgatgatgcaatttatgaactaaatggtaaagagctgtgtgatgaaagggtc
acaattgaacatgctcgagcccgaagaggaaggggaagattctcacaacggttcagttac
taccagtcgcagagtggatctagccggtatgggcctcctgttcgtactgaacacaggatc
attgttgaaaacctttcatcccgtatcagctggcaggacttgaaagatgtcatgagaaag
gcaggggaggtcacctatgtggatgcacacagaaacaacaggaatgaaggggttgtggag
tttgcatcttacagtgacatgaagagtgcactggaaaaattggatggcactgagctgaat
ggacgcagaattaaactgactgaagaccacagaaggcatagaagcagatctcgatcaagg
agttactcaagatctcgcagcaggtccaggtctacaggatcttccagatcggacagccgg
tccaggtccaggtcaaggtccaggtccagatccaggtctcgctctcgctcccgatctcgc
tctcgatcccgctctcgttctcgcagtcgtactcctaaaaagagttactcccacaaaagc
caccgctccagcttgatagcttcttccccttccccctcttcttctaaaagaaaatctcgt
tctaggtcgagctctgctcatagccgtagttaa
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