Corvus brachyrhynchos (American crow): 103620953 Help Entry 103620953         CDS       T08418                                  Symbol VPS39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism cbrc  Corvus brachyrhynchos (American crow) Pathway cbrc04140   Autophagy - animal cbrc04142   Lysosome biogenesis cbrc04145   Phagocytosis cbrc04148   Efferocytosis cbrc05132   Salmonella infection Brite KEGG Orthology (KO) [BR:cbrc00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     103620953 (VPS39)    04142 Lysosome biogenesis     103620953 (VPS39)    04140 Autophagy - animal     103620953 (VPS39)    04148 Efferocytosis     103620953 (VPS39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     103620953 (VPS39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cbrc04131]     103620953 (VPS39) Membrane trafficking [BR:cbrc04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     103620953 (VPS39) SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin VPS18_solenoid_2nd EcoR124_C SAM_CEP-1_C Motif Other DBs NCBI-GeneID:  103620953 NCBI-ProteinID:  XP_017597682 LinkDB All DBs Position Unknown AA seq 835 aa AA seqDB search MSSESVCCNRFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTI SKAKGASLFTCDLQQSDTGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMA WCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPVADGKVAVGQDDLTVVLNE EGVCTQKCALNWTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGG TNIIYVASNHFVWRLIPVSIATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIHHIKNL FAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPGLSGAELEK AHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHT NVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANS PLKGHERTVQYLQHLGTENLHLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSF LVENFKSLAIPYLEHIIHVWEETGADFHNCLIQLYCEKVQGLMKEYLSSFPADRAPVPAG EEGGDLGDYRKKLLLFLEKSSWYEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVH ILKDTNMAENYCHKHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGPIKMEVLEPQANLQAA LQVLELHHSKLDTTKAINLLPANTQISEIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLR VSIHHLLWTKVKCIITEEKVCTVCKKKIGNSAFARYPNAIVVHYFCSKEVNTLDT NT seq 2508 nt NT seq  +upstreamnt  +downstreamnt atgtcatcagaaagtgtctgttgcaataggtttgaagtgacattagagaaatccaataag aacttctcaaagaagattcaacagatccatgttgtttctcaatttaaaattttggtcagt ctattagaaaataacatttacgtccatgacctgttgacatttcaacaaatcaccacaatt tccaaggcaaaaggtgcatctctcttcacttgtgatctccagcaatcagatacaggggaa gaggtgctgagaatgtgtgtggcagtgcgcaagaagctacagctttatttttggaaggac agagagttccatgaactacagggggacttcagtgtacctgatgtacccaagtctatggcc tggtgtgaaaactccatctgtgtaggcttcaagagggactattacctgatacgggtggat ggaaaaggatctatcaaagaactgtttcccacagggaagcagctggaaccattggtagct cctgtagcagatggaaaagttgcagttggccaagatgatctaacagttgtgcttaatgaa gaaggggtctgtactcagaaatgtgccttgaattggacagatattcctatagccatggaa caccagcctccctacatcattgctgtcctgccaaggtacgtggagatccgcactttcgaa ccccggctgctggtgcagagcatcgagctgcagaggccgcgcttcatcacctctggaggc acaaacattatatatgtggcaagtaatcactttgtttggaggctcattccagtgtccata gccacacagatccagcagcttctgcaggacaaacagtttgagttggctttgcagttggca gaaatgaaagatgattcagatagtgagaagcgacaacaaattcaccacataaagaacctc tttgccttcaaccttttctgccagaagcgttttgatgaatccatgcaagtttttgccaag cttggtacagatcccactcatgtgatgggtctgtatcctgacctcctgcccacagattac aggaaacagctacagtatcccaaccccctgccagggctctctggggcagagctggagaag gcacatttagctctgatagactacctaactcaaaaaaggagtcagctagtgaagaagcta aatgattctgaccatcagtccagtacctcacccctcatggaaggaacacccacaatcaaa tccaaaaagaagctgctacaaatcattgataccactctgttaaagtgttacctgcataca aatgtagcactggtggccccactgctacgtctggagaacaatcactgccatattgaggag agtgagcatgtgctgaagaaggcacacaaatatagtgagctgataatactgtatgagaaa aaaggtctgcatgagaaagcattacaggtactggtggatcagtcaaagaaagccaactcg cctttgaagggtcacgagaggacagtgcaatatctgcagcatttgggcacagagaacttg catttggtattttcctactctgtctgggtgctgagagattttcctgaagatggactgaag atatttacagaagacctccctgaagtggaagctttaccacgtgacaaagtgctcagtttc ttggtagaaaattttaaaagcttggctattccttacctggaacacatcattcatgtctgg gaagaaaccggtgcggactttcacaactgtctgatccagctgtactgtgagaaagtgcag ggcttaatgaaggaatatctcagttctttccctgcagatagagctccagtgcctgctggg gaggaaggaggagacttgggggattaccggaaaaagctgcttctttttctggagaagtct agctggtatgaacctagtcgacttattagtgacttcccctttgatggtctcctagaagaa cgtgctctgctcttgggtcgtatggggaagcatgagcaagctctgtttatttatgttcat attttgaaggacaccaatatggctgaaaactactgccataaacattatgacagaaacaaa gatggcaacaaagatgtctatctgtccctgctccgcatgtatctctccccacccagtgtt cattgcctgggaccgatcaagatggaagtgctggagcctcaagccaatctgcaggctgct ctgcaggttttggaactgcaccacagcaaactggataccactaaggctataaacctactc ccagcaaatacacagattagtgagattcgcatcttcttagagaaagtccttgaagaaaat gctcagaagaaaagatttaatcaagtgctcaagaatcttctccatgcagagtttctgagg gtaagcatccaccaccttctgtggactaaggtgaaatgcattattacagaggagaaggtg tgcactgtttgtaaaaagaagataggtaacagtgcatttgctcgataccctaatgcaata gttgtgcattatttctgctccaaagaagtcaacacactggacacctga

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