Corvus brachyrhynchos (American crow): 103621493
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Entry
103621493 CDS
T08418
Name
(RefSeq) tenascin-X-like
KO
K06252
tenascin
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04510
Focal adhesion
cbrc04512
ECM-receptor interaction
cbrc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103621493
04518 Integrin signaling
103621493
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103621493
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cbrc00536
]
103621493
Glycosaminoglycan binding proteins [BR:
cbrc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103621493
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
103621493
NCBI-ProteinID:
XP_017598415
LinkDB
All DBs
Position
Unknown
AA seq
2040 aa
AA seq
DB search
MTTHELPSSAVAFSVTGLSPGRPFELLVQARRGPHLGAPGVLRLRTALIPAVPHHEVSPE
SPQGSLGSPAVAPSARGSPESTGSSGPLTGLGQGCPPQTLWDRLDLVARLSPYSGSLLQR
LESHLRATNFPLRGNQTVPGVARAILAYILRRHPALGILESRTGGMDREGTFQRVWDGGD
EGRGTGRMGRMGGRDILRRSKVTGSKGRNILGRGMREMVWKGCPVTHALGAGEGGNQEPV
LEWGDMDGMEPMEPWKNMGKTVKAEPEELRPSRPVLGDLSVTSVTPSSMRLQWSVPKDSF
DSFMLQYRDAQGQPQALPIDGGSRSVTVLGLSPSHRYRFHLYGLRGGKRIDRVSIDVITA
ATQPEELLLPSEDPQQEKLVTEFPTSEAPLVWAVLEELRVSGVTPNSVQLQWSVPEGSFE
SFMLQYRDAQGQPQALPIDGGSHSVTVPGLSPSHRYRFHLYGLQGRKKIDHVSTEAVTGT
EEQEELPLPSEEQKHEKLQTEAPPSDAPPVRAMLGELRVSSVTPNSVQLQWSVLEGSFDS
FKLQYRDAQDQPQALPIDGRSHLVTVPGLSPSHRYHFHLYGLQGRKKTDHVSIGISTAQQ
EGLPLPTEEHQQEKPETKSHPSEGPLVRAVLEELRVSTITPSSVGLQWTVPKGSFDSFML
QYRDAQGQPQALPIDGGSRSVTVPGLSPSHRYRFHLYGLRGSKRIDRVSTDVVTASKEPL
PTEEPQQEKLVTEFPTSEALPARAVLGELRVSSVTPNSVQLQWSVPEGSFESFMLQYRDA
QGQPQALPIDGGSRSVVPGLPPSRRYRFHLYGLRGRKKIDHVSTEVLTALPIDGGSRSVT
VPGLSPSHRYRFHLYGLRGSKRIDRVSTDVVTASKEPLPSEDPQQEKPEIEFPTSEALPA
RAVLGELRVSSVTPNSVQLQWSVPEGSFESFMLQYRDAQGQPQALPIDGGSRSVTVPGLS
PSHRYRFHLYGLRGGKRIDHVSTDIITGVGEGQRGEGSWWFGGSASKEPLPSEEPQQEKP
EIEFPTSEALPARAVLGELRVSSVTPNSVQLQWSVPEGSFESFMLQYRDAQGQPQALPID
GVSHSVTVPGLSPSCRYRFHLYGLRGRKKIDHVSTEVLTGAEEPEELPLPSEEPQHEKPQ
TEAPATEATPARAVLEELRVSTITPSSVGLQWTVPKGSFDSFMLQYRDAQGQPQALPIDG
GSRSVTVPGLSPSHRYRFHLYGLRGSKRIDRVSTDVVTATDKPEEPPLPSEDPKTETLPT
EDNQPEHPQTEVPPARAVLGELRVSSVTPNSVQLQWSVPESPFESFMLQYRDAQGQPQAL
PIDGRSRSVTVLGLSPSHRYRFHLYGLQGGKRIDHMSTNVATDAAVPEELPLPSEEPQPE
DHKPEQPQTEHPQTGADLEQVALGELRISSVTPNSVQLQWSVPKGSFNSFTLQYRDAQGQ
PQALAVDGGSRSVTVPGLAPSHRYRFHLYGLQGRKRTDRVSIDVVTADPEDLPSPSMDST
TEASTTEDHQIAHPQAKGPPSEAPSAQAVLGELKVSSVTPNSVQLQWSVPEGSFESFMLQ
YRDAQGQPQALPIDGESHSVMVPGLSPSRRYRFHLYGLRGRKKIDRVSTDIVTADREATA
VPEELPLPSEEPQDEKHQTEAPPSATPPAWAVLKELRVSSITPDSVGLQWSVPEGPFDSF
MLQYRDAQGQPQALPIDGGSRSVTVPGLSPSHRYRFHLYGLRGRKRVYHTSTEAVTAAAN
LDEPAIPSEELQPEDPQPKDPPVESPSTDTPLARAVLRELRISSVTPSSVGLQWTVPKGS
FDSFMLQYRDAQGQPQVLPVDGRSRSVTVPGLSPSHRYRFHLYGLRGGKRIDHVSTDIIT
ATAKPEELPLPSEEPQPDDPKAKDPQTEVPASEARAVLRELRVSSVTPNSVQLQWSVPEG
SFESFMLQYWDAQGQPQALPIDGGSHSVTVPGLSPSHRYRFHLYGLQGGKRIDRVSTEAI
TGEGLQGPSGWALGGPAVPGCTGTPPTPPLMAMSWSTAPPGGPSRPCGCLPRLHHSSCGG
NT seq
6123 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcatgaactgcccagctctgctgtcgccttctcagtgacagggctatcccca
ggccgcccctttgagctgctggtccaagcccggcgggggccgcatctgggggcacccggg
gtcctgcgtctgcgcacagcgctcatcccggctgtgccccaccatgaagtgtccccggaa
tcacctcaaggctccctggggtccccagcagtggcaccatcagcccgagggtccccagag
tccacaggatcctcagggccactgacagggctgggacagggatgtcccccacagactctc
tgggacagactggacctggtggcccggctgtccccgtacagtggatccctgctccagcgt
cttgagagccaccttcgggctaccaacttccctctccgtggcaatcagacagtgccaggg
gtggcccgtgccatcctggcctacatcctgcgccggcacccagccctgggcatcctggag
agccgaacaggggggatggacagggaagggacattccagagagtgtgggatggaggggat
gagggaaggggaacagggaggatggggaggatgggtggaagggacatcctgagaaggagt
aaggtgactgggagcaaggggaggaacatcctgggtaggggaatgagggagatggtgtgg
aagggatgtcctgtaacacatgctctgggggcaggggagggtggaaaccaggagccggtg
ctggaatggggggacatggatgggatggagccgatggagccatggaagaacatggggaaa
acagtcaaagccgagccagaggagctgcgtccatcccggccagtcctgggtgacctcagt
gtcaccagtgtcacccccagctccatgcggctgcagtggagtgtccccaaggactccttt
gactccttcatgctgcagtaccgggatgcccagggccagccccaggccctgcccattgat
ggtgggtctcgctcagtgacggtgctggggctgtccccatctcaccggtaccgcttccac
ctctatgggttgcggggtgggaagaggatcgaccgcgtctccattgatgtcatcacagct
gcaacacagccagaggagctcctcctgccctcagaagatccccaacaggagaagctggta
actgagttcccaacatccgaggcacccctggtgtgggcagtgctggaggagctgagggtc
tccggtgtcacacccaactctgtgcagctgcagtggagtgtccctgagggctcctttgag
tccttcatgctgcagtaccgggatgcccagggccagccccaggccctgcccatcgatggc
gggtcccactcagtgacggtgccagggctgtccccatcccatcggtaccgcttccacctc
tatgggctgcagggcaggaagaagattgaccatgtctccactgaggctgtgacaggcaca
gaagagcaagaggagctgcccctgccctcagaggagcaaaaacatgagaaactccaaact
gaggcccctccatctgatgctcccccagtgcgggcaatgctgggagagctgagggtctcc
agtgtcacacccaactctgtgcagctacagtggagtgtccttgagggctcctttgactcc
ttcaagctgcagtaccgggatgcccaagaccagccccaggccctgcccattgatggaagg
tcccacttggtgacagtgccggggctgtccccatcccaccgttaccacttccacctctac
gggttgcagggcaggaagaagactgaccatgtctctattggtattagcacagcacagcaa
gaggggctgcccctgccaacagaggagcaccaacaggagaagcctgaaacgaaatcccac
ccatctgagggacccctggtgagggcggtgctggaggagctgagggtctccaccatcacc
cccagctccgtggggctgcagtggactgtccccaagggctccttcgactcctttatgctg
caatatcgggatgcccaaggccagccccaggccctgcccatcgatggcgggtctcgctcg
gtgacagtgccggggctgtccccatcccatcggtaccgcttccacctctatgggctgcgg
ggcagtaaaaggattgaccgtgtctccaccgacgtcgtcacagccagcaaagaaccctta
cccactgaggagccccaacaggagaagctggtaactgagttcccaacatctgaggcactc
ccagcacgagcggtgctgggagaactgagggtctccagtgtcacacccaactctgtgcag
ctgcagtggagtgtccctgagggctcctttgagtccttcatgctgcagtaccgggatgcc
cagggccagccccaggccctgcccatcgatggcgggtctcgctcggtggtgccggggctg
cccccgtctcgccggtaccgcttccacctctatgggttgcggggcaggaagaagattgac
cacgtctccaccgaggtcctgacagcgctgcccatcgatggcgggtctcgctcggtgaca
gtgccggggctgtccccatcccatcggtaccgcttccacctctatgggctgcggggcagt
aaaaggattgaccgtgtctccaccgacgtcgtcacagccagcaaagaacccttgccctca
gaagatccccaacaggagaagccggaaattgagttcccaacatctgaggcactcccagca
cgagcggtgctgggagaactgagggtctccagtgtcacacccaactctgtgcagctgcag
tggagtgtccctgagggctcctttgagtccttcatgctgcagtaccgggatgcccagggc
cagccccaggccctgcccatcgatggcgggtctcgctcggtgacagtgccggggctgtcc
ccatcccatcggtaccgcttccacctctatgggctgcgtggaggcaaaaggattgaccac
gtctccactgacatcatcacaggtgtgggggaaggtcagaggggtgagggtagttggtgg
tttggtggatcagccagcaaagaacccttgccctcagaagagccccaacaggagaagccg
gaaattgagttcccaacatctgaggcactcccagcacgagcggtgctgggagaactgagg
gtctccagtgtcacacccaactctgtgcagctgcagtggagtgtccctgagggctccttt
gagtccttcatgctgcagtaccgggatgcccagggccagccccaggccctgcccatcgat
ggcgtgtcccactcagtgacggtgccggggctgtccccgtcttgccggtaccgcttccac
ctctatgggttgcggggcaggaagaagattgaccacgtctccaccgaggtcctgacaggt
gcagaagagccagaggagctgcccctgccctcagaggaaccgcagcatgagaaaccccaa
actgaggcccctgcaactgaggccactccagcacgggcagtgctggaggagctgagggtc
tccaccatcacccccagctccgtggggctgcagtggactgtccccaagggctccttcgac
tcctttatgctgcaatatcgggatgcccaaggccagccccaggccctgcccatcgatggc
gggtctcgctcggtgacggtgccggggctgtccccatcccatcggtaccgcttccacctc
tatgggctgcggggcagtaaaaggattgaccgtgtctccaccgacgtcgtcacagccaca
gacaagccagaggagccacccttgccctcagaggatcccaaaactgaaaccctgccaact
gaggacaatcaacctgagcacccccaaactgaggtccccccagcacgggcagtgctggga
gaactgagggtctccagtgtcacacccaactctgtgcagctacagtggagtgtccctgag
agcccctttgagtccttcatgctgcagtaccgggatgcccaaggccagccccaggccctg
cccatcgatggcaggtcccgctcagtgacagtgctggggctgtccccatcccatcggtac
cgcttccacctctacgggttgcagggtggaaaaaggattgaccacatgtccaccaatgtt
gccacagatgcagcagtgccagaggagctgcccttaccgtcagaggagccccaacctgaa
gaccacaaacctgagcagccacaaacagagcatccccaaaccggggccgacctggaacag
gtggcgctgggggagctgagaatctccagtgtcacacccaactctgtgcagctgcagtgg
agtgtccctaagggctccttcaactccttcacgctgcagtaccgggatgcccaaggccag
ccccaggccctggctgttgacggtgggtctcgctcagtgacggtgccagggctggcccca
tcacaccggtaccgcttccacctctacgggctgcagggcaggaagaggactgatcgcgtc
tccatcgatgttgtcacagctgacccagaggatttgccctcaccctcaatggactccaca
actgaggcctccacaactgaggatcaccaaattgcacatccccaagccaagggcccccca
tctgaggccccctcagcacaggcagtgctgggagagctgaaggtctccagtgtcacaccc
aactctgtgcagctgcagtggagtgtccctgagggctcctttgagtccttcatgctgcag
taccgggatgcccagggccagccccaggccctgcccatcgatggagagtcccactcggtg
atggtgccggggctgtccccgtctcgccggtaccgcttccacctctatgggttgcggggc
aggaagaagattgaccgtgtctccactgacattgtcacagctgacagggaagctacagca
gtgccagaggagctgcctctgccatcagaggaaccccaagatgagaaacaccaaactgag
gcccccccatctgcaacccccccagcgtgggcagtgctgaaggagctgagagtctccagc
atcacccctgactctgtgggactgcagtggagcgtccctgagggcccttttgactccttc
atgctgcagtaccgggatgcccagggccagccccaggccctgcccatcgatggcgggtcc
cgctcagtgacagtgccagggctgtccccgtctcaccggtaccgcttccacctctatggg
ctgcggggcaggaagagggtctaccatacctccactgaagctgttacagctgcagccaac
ttggatgagccagccataccttcagaggagctccaacctgaggacccccaacctaaagat
cccccagttgagtccccctcaactgacactcccttggcacgggcagtgttgcgggagctg
agaatctccagtgtcacgcccagctctgtggggctgcagtggactgtccccaagggctcc
ttcgactccttcatgctgcagtatcgggatgcccaaggccagccccaggtcctgcctgtc
gatggcaggtcccgctcagtgacggtgccggggctgtccccatcccatcggtaccgcttc
cacctctatgggctgcgtggaggcaaaaggattgaccacgtctccactgacatcatcaca
gccacagccaagccagaggagctgcccctgccctcagaggagccccaacctgacgacccc
aaagcaaaagacccccaaactgaggtccccgcatctgaggcacgggcagtgctgagagag
ctgagggtctccagtgtcacacccaactctgtgcagctgcagtggagtgtccctgagggc
tcctttgagtccttcatgctgcagtactgggatgcccagggccagccccaggccctgccc
atcgatggcgggtcccactcggtgacagtgccggggctgtccccatctcaccggtaccgc
ttccacctctatgggctgcagggtgggaagaggattgaccgtgtctccactgaagccatc
actggtgaggggctgcagggaccctctgggtgggctctgggtggccccgcagtgcctggc
tgtactgggaccccccccacgccccccctgatggctatgagctggagtacggcccccccg
gggggccccagcagaccctgtggctgcctcccgaggctacatcacagcagctgtgggggc
tag
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