Corvus brachyrhynchos (American crow): 103621505
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Entry
103621505 CDS
T08418
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03030
DNA replication
cbrc03420
Nucleotide excision repair
cbrc03430
Mismatch repair
cbrc03440
Homologous recombination
cbrc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103621505 (RPA1)
03420 Nucleotide excision repair
103621505 (RPA1)
03430 Mismatch repair
103621505 (RPA1)
03440 Homologous recombination
103621505 (RPA1)
03460 Fanconi anemia pathway
103621505 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbrc03000
]
103621505 (RPA1)
03032 DNA replication proteins [BR:
cbrc03032
]
103621505 (RPA1)
03400 DNA repair and recombination proteins [BR:
cbrc03400
]
103621505 (RPA1)
Transcription factors [BR:
cbrc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103621505 (RPA1)
DNA replication proteins [BR:
cbrc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
103621505 (RPA1)
DNA repair and recombination proteins [BR:
cbrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
103621505 (RPA1)
MMR (mismatch excision repair)
103621505 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
103621505 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
OB_MEIOB_N
DUF4939
IBR
Motif
Other DBs
NCBI-GeneID:
103621505
NCBI-ProteinID:
XP_008638550
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MQGEDVCNPVLQVINTRAIATGTGPPRYRVLMSDGVNTLSSFMLATQLNSLVEQERLSAR
CICQVNRFIVNSLKDGRRVVILMDVNVMQTADQVGGTIGNPQPYNEGQGQQRSAAPAGNP
AASKPQQQNGNLSGAGPAAPKYHAPSNQFGKASAPSALKTPGGSQAKVVPIASLNPYQSK
WTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADKFFPLIELNKVYY
FTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFVSISDLENTPKDSI
VDVIGICKSYEDVTKITVKANNREVSKRNVHLMDTSGKLVTVTLWGNEAEQFDGSRQPVI
AIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLECASISDVRGGPAA
GANTNWKTLFEAKSENLGQGDKADYFSCVGTIVHLRKENCMYQACPSQDCNKKVIDQQNG
LYRCEKCDREFPNFKYRLLLLVTIADCLEYQWVTCFQDSAEFILGQNAAFLGELKEKNEQ
AFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAMDVKPVNYREYSKRLIANIRRNAQL
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggaggacgtctgcaatcccgtgctgcaagtgatcaatacacgggctattgct
acaggaactgggcccccacgttaccgagtgctgatgagcgatggggtgaacaccctttcc
tctttcatgttggcaacacagctgaactccctggtggaacaggaacgcttgtcagcccgg
tgtatttgccaggttaacagattcattgtcaacagcctgaaagatggaaggagagtggtt
atcctgatggatgtaaatgtcatgcaaactgctgatcaggttggtgggactattggcaat
ccccagccatacaatgaagggcaagggcagcaacgttctgcagctccagcaggaaaccca
gcagccagcaaaccacagcaacaaaatggcaatttgtctggagcaggtcctgctgctccc
aagtaccacgctccctccaaccagtttggaaaagcgagtgctcccagtgccctgaagaca
cctggggggtctcaggccaaagtggtgccaattgccagcttgaatccataccagtccaag
tggaccatttgtgctcgggtcacccaaaaaggccagatccgcacgtggagcaactcccgt
ggtgaaggaaagctcttttccatagagctggttgatgaaagtggtgagattagagctact
gcattcaatgatcaagcagacaagttctttccactcattgaattgaacaaggtatattat
tttaccaaaggcaatttgaagactgctaacaagcaatatacagctgttaagaatgactat
gagattacgttcactaatgagacttcagttgtgccctgtgatgatgcccagcatcttcca
tctgttcagtttgattttgtatccatctctgacttggagaacacgcccaaagactcgatt
gttgatgtaattggaatttgtaagagctacgaagatgtcactaaaattacagtgaaggct
aacaatagggaggtttcaaagaggaatgtgcatctgatggatacatcagggaagctggtg
acagtcacgctgtggggaaacgaggctgaacagtttgatggttccagacaacctgtgatt
gccatcaaaggagcccgtgtctctgactttggtggcagaagcctgtctgtcctgtcctcc
agcacagttgtcatcaaccctgatagcccagaggcttttaaactccgaggatggtttgac
tccgaggggcagcttctggaatgtgcctccatctctgatgtgaggggtgggccagcagct
ggagcaaataccaattggaaaactttgtttgaagccaaatctgagaacttgggacaagga
gataaggcagattattttagctgtgtgggcacaattgtacatctgcgcaaagagaactgc
atgtaccaggcatgtccctctcaggattgcaacaagaaagtgatagaccagcaaaatgga
ctttaccgctgtgagaagtgtgaccgcgaattccccaacttcaagtaccgcctgctgctc
ctggtgaccattgcagactgtctggaatatcagtgggtgacttgttttcaagattcagca
gaattcattcttgggcaaaatgcagctttcctgggagaactgaaggaaaagaacgagcag
gcttttgaagaagtgttccaaaacgcaaacttcaacacgtacgagttcaggatccgagtg
aaactggagacttacaatgacgaatcccgtattaaggccacagcaatggacgtcaaaccc
gtgaactacagagaatacagcaagaggttgattgccaacatcaggagaaatgctcagctg
gggtga
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integrated database retrieval system
