Corvus brachyrhynchos (American crow): 103621615 Help Entry 103621615         CDS       T08418                                  Symbol CUX1 Name (RefSeq) protein CASP   KO K09313   homeobox protein cut-like Organism cbrc  Corvus brachyrhynchos (American crow) Brite KEGG Orthology (KO) [BR:cbrc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cbrc03000]     103621615 (CUX1) Transcription factors [BR:cbrc03000]  Eukaryotic type   Helix-turn-helix    Homeo domain CUT     103621615 (CUX1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CUT Homeodomain Homeobox_KN Motif Other DBs NCBI-GeneID:  103621615 NCBI-ProteinID:  XP_017598457 LinkDB All DBs Position Unknown AA seq 1546 aa AA seqDB search MLRALLSWLESRACFQACISHLAAHAAAGGQSAVSLFCQTSELVSDTESEKKNGESEMYS GTGELLFFNQVLICLQVKNSISCKSPKVLQRQNSSVKRELDTTATILANRQDESEQSRKK LIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVP ALDLGQQLQLKVQRMHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTL KNQAENIALEKEQKLQNDFAEKERKLQETQMSTASKLEEAEHKVQALQTALEKTRTELFD LKTKYDEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANKSLQLATQIQKA PDVEQAIEVLTRSSLEAELAAKEREIAQLVEDVQRLQGSLTKLRENSSSQISQLEQQLTA KNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSESSGAQDASKPLEVLLLEKNRSLQ SENATLRIANSDLSGSARRKGKDQPESQRPATLPASPPSQLLRNAGEQASNTNGTHQFSP TGLSQDFFSSSLASPSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFPTGPYS TNSISSQSPLQQSPDVNGMAPSPSQSESAGSISEGEEIDTAEIARQVKEQLIKHNIGQRI FGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQREN PGQNLNRLFQEVPKRRNGSEGNITTRIRTTESGSDEAIKSILEQAKRELQVQKTAEPAQP PSASSSGNSDDAIRSILQQARREMEAQQAALEPALKTPPLSQADISILSPKLVSTPAMSS VSSYSPLAISLKKHSSVTDSSISALQNLSGLKKEPQEAPVLELHGISDSAQGMLRHVKNE LGRGGVWKDHWWNTVQHERRNAALPEDIKVEEASGGKEKVSNQTRPDRSQLQGPSSSEYW KAGPQAESPYSQSSELSMTGASRSETPQNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYM YQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPF IRMQLWLNGELGQCVLPAQGQQQGQVLHSVTSLQDSLQQGCASSESTPKTSASCSPAPES PMSSSESVKSLTELVQQPCPAIETSKDGKSQESSEPPASESQSTTPLPLSGHSALSIQEL VAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGR EPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQSCESSSTGIDYSQGASPQ PQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRI RRELFIEEIQAGSQSQEARRGARPSEKAEPESLEDTDDEGRLRAPRQRSPPAPQRPGDAL ETLPNSATEGDASTSAASTSVLTGESSYKSKESSEKISSVPSTSSTPAAGSQKANSLQSL FSFSETASSRNTRDSSLRKKKAANLNNIIHRLEKAASREEAVEWEF NT seq 4641 nt NT seq  +upstreamnt  +downstreamnt atgctccgagccttgctgtcctggctggaatctcgagcctgtttccaagcttgtatttct cacttggcagcacatgctgcggctggtgggcaatctgccgtatcccttttttgtcaaaca tcggagttggtgtctgacactgaatctgagaagaagaacggggagagtgaaatgtacagc ggaactggagagctacttttttttaatcaggtgcttatctgcttacaggtgaaaaactcc atttcatgtaaatcccctaaagttctacagagacaaaacagttctgtcaagagagagctc gataccacagcaacgatattggcgaaccggcaagatgaaagtgagcagtccaggaaaaaa cttattgagcaaagtcgtgagttcaagaaaaacactccagaggacctgcgcaaacaggta gctccattactgaagagtttccagggagagattgacgcattgggcaaacgaagcaaagaa gcagaggcagccttcttgaatgtttataagagattaattgatgttccagatccggttcca gccttggatttaggacagcagcttcagctgaaggttcaacgtatgcacgatattgaaaca gaaaaccagaaacttagggaaactctggaggaatacaataaagagttcgccgaggtgaaa aatcaggaggttacaataaaagcacttaaggagaaaatccgagaatatgaacagaccctg aagaaccaagcggagaacatagcccttgaaaaggaacaaaagttacaaaatgattttgcg gagaaggagagaaaattgcaggagacacagatgtcgacagcctcgaagctggaggaagct gaacacaaagttcaagctttgcaaacagccttggaaaaaaccaggacagaactatttgat ctgaaaacaaaatatgatgaagaaactactgcaaaggctgatgaaatcgagatgatcatg acagaccttgaaagagcgaatcagagggcagaggtggctcagagagaggcagagacctta agggagcagctctcatcagctaacaaatctctccaacttgctacgcagatccagaaggca cctgatgtggagcaggccatcgaggtgctgacacgctccagcttggaagcggaactggct gcgaaggagcgggagatcgcccagctcgtagaagatgtccagagactccagggcagcctc accaagctgagggagaactccagcagccaaatctcccagctggagcagcagctgacggcc aagaacagcacactcaaacaactggaagaaaaactgaaaggacaggctgattatgaagag gttaagaaagaattaaatatattgaaatccatggagtttgcaccatctgaaagctctggt gcgcaggatgcatccaagccgctggaggtgcttctgctggagaagaaccgctcgctgcag tcggagaatgccacgctgcgcatcgccaacagcgacctgagcgggtcagccaggagaaaa gggaaagaccagcctgagagtcagcgtcctgcaaccttgccggcctcccctccttcccag ttgctccgcaacgcgggggagcaggcttccaatactaatggtacacaccagttctcacca acgggtttaagtcaagactttttcagctcatccctggcaagccccagcttacccctggcc tccacaggaaaatttgcactaaactctctcctccagcgacagctaatgcagtccttctac tccaaggcaatgcaggaagcaggaagcacaagcatgatttttccaacaggtccatacagc acaaactccatatcttcccaaagtccattacaacaaagcccggatgtaaatggcatggcc ccatctcccagccagtcagaaagtgctgggagcatctctgaaggcgaggagatagacacg gccgaaattgcacgtcaggtgaaagagcagttgatcaagcacaatattggacagcggata tttggacattatgtgttgggactgtcgcaagggtctgtgagtgagatcctggcccggcca aagccatggaataaactgactgtgagaggcaaggagccatttcataagatgaagcagttc ctgtcggacgagcagaacatcttggctcttcgcagcatccagggcagacagagagagaat ccaggccagaacctgaacagactatttcaggaagtaccgaaacgaagaaatgggtctgaa ggtaacataaccacacgaatccgaaccacagagtctggctctgatgaagccatcaaatcc attctcgaacaagccaaaagggagctgcaagtacagaaaacagctgagccggctcagccg ccttctgcctctagcagtggcaattctgatgatgcaattcgatccattctgcaacaagcc cgacgggaaatggaggcacagcaggctgcccttgaacctgccttaaaaacaccacctcta tctcaagctgacatttctatcctgtcccccaaactagtgtctacacctgcaatgtcttcg gtttccagctattctcctttggccatatccctgaagaaacattcatctgtcactgattcc agtatctctgcattgcagaacctctctgggctcaaaaaggagcctcaggaggcacctgtt ttagagcttcatggaataagtgattctgcccagggtatgttgaggcatgttaaaaatgag ttgggacgtggtggtgtttggaaggaccattggtggaatactgtgcagcatgagagaaga aatgcagctcttcccgaagatataaaagttgaggaagccagtggtggaaaagaaaaggtc agcaatcagactaggccagatcgtagccagctccaaggaccgtcttcttccgagtattgg aaagcggggccacaagcggaatctccgtactcgcagagttctgaattgagcatgactggg gcgagtcgcagtgagacaccacaaaatagccccctcccttcatcccctatcgtgtccttg tccaagccatccaaaccttcggttcctccactgacacccgagcagtatgagatttatatg taccaggaggtggatacgatagagctaacgcggcaggtcaaggaaaagctagcaaagaat ggcatctgccaaaggatctttggggaaaaggtattggggctgtcccaaggaagtgtcagt gacatgctctccaggccaaagccatggagtaaattgacccaaaaaggccgagaaccattt attcgtatgcagctctggttgaatggtgagctgggacagtgtgtcctgcccgcacaaggg cagcaacaaggacaagtccttcactctgtgacatcattacaggattccctacagcaggga tgtgcaagctcagaaagtactccaaagacttctgccagttgcagtcctgctcctgaatct cccatgagttccagtgaatcagtgaaaagcctgactgagttggtgcaacagccctgtccc gccatagagacgagtaaggatggcaaatcccaggaatccagcgagccgcctgcatctgaa tcccaatccacgacccctctgccgctctcgggccactcagcactcagcatccaagaactg gtggccatgtcccctgagctggacacctatggcatcaccaagagggtcaaggaagtgctc acggacaacaatcttggtcagcgtttgttcggggagacaatcctagggctgacacaaggc tctgtctcagacctgctggctcgccccaagccctggcacaagctgagtctgaagggaagg gaaccctttgtccgcatgcagctgtggctcaacgatcccaacaacgtggagaagctgatg gatatgaagcgcatggagaaaaaagcctacatgaaacggcggcacagctccgtcagcgac agccagtcctgtgagtcctcatccactggcatcgactacagccagggcgccagcccccag ccccagcaccagctcaagaagccccgggtggtgctggcaccggaggagaaagaagctctc aaacgagcctaccagcaaaagccatacccatcaccaaaaaccattgaggaactcgccacg cagctcaacttgaaaaccagcaccgtgatcaactggttccacaattacaggtcccgcatc cgccgggagctgttcatcgaggagatccaagccgggagccagagccaggaggcacggcga ggcgccaggccttcggagaaagcggagccggagagcctggaggacaccgatgacgagggc cggctcagagcgccgcgccagagatccccgccggcaccgcagcgcccgggagatgctctg gagacactgccaaactctgccacagaaggggatgcctctacctcagctgcctccacctca gtccttacgggggagagctcctacaagtcaaaagaaagttcagagaaaatctccagtgtg ccaagtacgagctcgacgccggccgcaggctcgcagaaagccaactctctccagagcttg ttcagcttctcggagacggcgagctccaggaacacgcgagacagctccctgaggaaaaag aaagcggccaacttgaacaacatcatccaccgcttggagaaggctgcgagtcgggaagag gccgtcgagtgggagttttga

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